RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 RASIP1Q5U651 963 aa24.35■■□□□ 1.49
CCDC42-203ENST00000581598 C16orf59Q7L2K0 433 aa24.35■■□□□ 1.49
CCDC42-203ENST00000581598 SAMD3Q8N6K7 520 aa24.35■■□□□ 1.49
CCDC42-203ENST00000581598 NCOA7Q8NI08 942 aa24.35■■□□□ 1.49
CCDC42-203ENST00000581598 MAP4K1Q92918 833 aa24.35■■□□□ 1.49
CCDC42-203ENST00000581598 TAAR1Q96RJ0 339 aa24.35■■□□□ 1.49
CCDC42-203ENST00000581598 VAT1LQ9HCJ6 419 aa24.35■■□□□ 1.49
CCDC42-203ENST00000581598 MAP3K20Q9NYL2 800 aaKnown RBP24.35■■□□□ 1.49
CCDC42-203ENST00000581598 UNC80Q8N2C7 3258 aa24.35■■□□□ 1.49
CCDC42-203ENST00000581598 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.34■■□□□ 1.49
CCDC42-203ENST00000581598 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.34■■□□□ 1.49
CCDC42-203ENST00000581598 ERICH2A1L162 156 aa24.34■■□□□ 1.49
CCDC42-203ENST00000581598 E7EWF7 191 aa24.34■■□□□ 1.49
CCDC42-203ENST00000581598 CSF2RAP15509 400 aa24.34■■□□□ 1.49
CCDC42-203ENST00000581598 PSMC6P62333 389 aa24.34■■□□□ 1.49
CCDC42-203ENST00000581598 GRM4Q14833 912 aa24.34■■□□□ 1.49
CCDC42-203ENST00000581598 TMEM240Q5SV17 173 aa24.34■■□□□ 1.49
CCDC42-203ENST00000581598 PSRC1Q6PGN9 363 aaPredicted RBP24.34■■□□□ 1.49
CCDC42-203ENST00000581598 RALYLQ86SE5 291 aaKnown RBP24.34■■□□□ 1.49
CCDC42-203ENST00000581598 MTG1Q9BT17 334 aaPredicted RBP24.34■■□□□ 1.49
CCDC42-203ENST00000581598 PPP1R12CQ9BZL4 782 aa24.34■■□□□ 1.49
CCDC42-203ENST00000581598 SEMA6BQ9H3T3 888 aa24.34■■□□□ 1.49
CCDC42-203ENST00000581598 HIPK3Q9H422 1215 aa24.34■■□□□ 1.49
CCDC42-203ENST00000581598 COL20A1Q9P218 1284 aa24.34■■□□□ 1.49
CCDC42-203ENST00000581598 IFIT3O14879 490 aaKnown RBP24.33■■□□□ 1.49
CCDC42-203ENST00000581598 ZBTB5O15062 677 aa24.33■■□□□ 1.49
CCDC42-203ENST00000581598 B4GALT4O60513 344 aa24.33■■□□□ 1.49
CCDC42-203ENST00000581598 TXNP10599 105 aaKnown RBP24.33■■□□□ 1.49
CCDC42-203ENST00000581598 HSD17B4P51659 736 aa24.33■■□□□ 1.49
CCDC42-203ENST00000581598 SART3Q15020 963 aaKnown RBP24.33■■□□□ 1.49
CCDC42-203ENST00000581598 CCDC62Q6P9F0 684 aa24.33■■□□□ 1.49
CCDC42-203ENST00000581598 RMDN3Q96TC7 470 aa24.33■■□□□ 1.49
CCDC42-203ENST00000581598 NOC4LQ9BVI4 516 aaKnown RBP24.33■■□□□ 1.49
CCDC42-203ENST00000581598 ALDH8A1Q9H2A2 487 aaPredicted RBP24.33■■□□□ 1.49
CCDC42-203ENST00000581598 RIOX1Q9H6W3 641 aa24.33■■□□□ 1.49
CCDC42-203ENST00000581598 GPHNQ9NQX3 736 aaPredicted RBP24.33■■□□□ 1.49
CCDC42-203ENST00000581598 OPLAHO14841 1288 aa24.32■■□□□ 1.48
CCDC42-203ENST00000581598 ARIH2O95376 493 aa24.32■■□□□ 1.48
CCDC42-203ENST00000581598 SUPT20HL2P0C7V6 817 aa24.32■■□□□ 1.48
CCDC42-203ENST00000581598 CYP2C18P33260 490 aa24.32■■□□□ 1.48
CCDC42-203ENST00000581598 TRAF1Q13077 416 aa24.32■■□□□ 1.48
CCDC42-203ENST00000581598 WTAPQ15007 396 aa24.32■■□□□ 1.48
CCDC42-203ENST00000581598 STXBP2Q15833 593 aa24.32■■□□□ 1.48
CCDC42-203ENST00000581598 STOX1Q6ZVD7 989 aa24.32■■□□□ 1.48
CCDC42-203ENST00000581598 TRPV6Q9H1D0 765 aa24.32■■□□□ 1.48
CCDC42-203ENST00000581598 IL23AQ9NPF7 189 aa24.32■■□□□ 1.48
CCDC42-203ENST00000581598 TAF6LQ9Y6J9 622 aa24.32■■□□□ 1.48
CCDC42-203ENST00000581598 MYL3P08590 195 aa24.31■■□□□ 1.48
CCDC42-203ENST00000581598 TROAPQ12815 778 aa24.31■■□□□ 1.48
CCDC42-203ENST00000581598 COPS5Q92905 334 aa24.31■■□□□ 1.48
CCDC42-203ENST00000581598 FAM161BQ96MY7 647 aa24.31■■□□□ 1.48
CCDC42-203ENST00000581598 MTA3Q9BTC8 594 aa24.31■■□□□ 1.48
CCDC42-203ENST00000581598 TTYH1Q9H313 450 aaPredicted RBP24.31■■□□□ 1.48
CCDC42-203ENST00000581598 BAZ2BQ9UIF8 2168 aaKnown RBP24.3■■□□□ 1.48
CCDC42-203ENST00000581598 PPP1R11O60927 126 aaPredicted RBP24.3■■□□□ 1.48
CCDC42-203ENST00000581598 ARHGEF16Q5VV41 709 aa24.3■■□□□ 1.48
CCDC42-203ENST00000581598 NFRKBQ6P4R8 1299 aa24.3■■□□□ 1.48
CCDC42-203ENST00000581598 ZNF365Q70YC5 407 aa24.3■■□□□ 1.48
CCDC42-203ENST00000581598 MB21D2Q8IYB1 491 aaPredicted RBP24.3■■□□□ 1.48
CCDC42-203ENST00000581598 PXMP2Q9NR77 195 aa24.3■■□□□ 1.48
CCDC42-203ENST00000581598 RBM8AQ9Y5S9 174 aaKnown RBP24.3■■□□□ 1.48
CCDC42-203ENST00000581598 EIF3JO75822 258 aaKnown RBP24.29■■□□□ 1.48
CCDC42-203ENST00000581598 CFBP00751 764 aa24.29■■□□□ 1.48
CCDC42-203ENST00000581598 ANTXR2P58335 489 aa24.29■■□□□ 1.48
CCDC42-203ENST00000581598 PTPN11Q06124 597 aaPredicted RBP24.29■■□□□ 1.48
CCDC42-203ENST00000581598 SLC35G1Q2M3R5 365 aa24.29■■□□□ 1.48
CCDC42-203ENST00000581598 IGDCC4Q8TDY8 1250 aa24.29■■□□□ 1.48
CCDC42-203ENST00000581598 HERVK_113Q902F9 699 aa24.29■■□□□ 1.48
CCDC42-203ENST00000581598 CDX2Q99626 313 aaPredicted RBP24.29■■□□□ 1.48
CCDC42-203ENST00000581598 SENP2Q9HC62 589 aa24.29■■□□□ 1.48
CCDC42-203ENST00000581598 PCDHA1Q9Y5I3 950 aa24.29■■□□□ 1.48
CCDC42-203ENST00000581598 UMODL1Q5DID0 1318 aa24.29■■□□□ 1.48
CCDC42-203ENST00000581598 GH1P01241 217 aa24.28■■□□□ 1.48
CCDC42-203ENST00000581598 NR3C2P08235 984 aa24.28■■□□□ 1.48
CCDC42-203ENST00000581598 NBPF20Q3BBV1 942 aa24.28■■□□□ 1.48
CCDC42-203ENST00000581598 MAP3K14Q99558 947 aa24.28■■□□□ 1.48
CCDC42-203ENST00000581598 WNT8AQ9H1J5 351 aa24.28■■□□□ 1.48
CCDC42-203ENST00000581598 CUL9Q8IWT3 2517 aa24.27■■□□□ 1.48
CCDC42-203ENST00000581598 CYTH3O43739 400 aa24.27■■□□□ 1.48
CCDC42-203ENST00000581598 ACRP10323 421 aa24.27■■□□□ 1.48
CCDC42-203ENST00000581598 EIF2AK2P19525 551 aaKnown RBP24.27■■□□□ 1.48
CCDC42-203ENST00000581598 DNAJB2P25686 324 aa24.27■■□□□ 1.48
CCDC42-203ENST00000581598 ARHGAP1Q07960 439 aa24.27■■□□□ 1.48
CCDC42-203ENST00000581598 TMEM67Q5HYA8 995 aa24.27■■□□□ 1.48
CCDC42-203ENST00000581598 SEPT14Q6ZU15 432 aa24.27■■□□□ 1.48
CCDC42-203ENST00000581598 CATIPQ7Z7H3 387 aa24.27■■□□□ 1.48
CCDC42-203ENST00000581598 SKAP1Q86WV1 359 aa24.27■■□□□ 1.48
CCDC42-203ENST00000581598 EMID1Q96A84 441 aaPredicted RBP24.27■■□□□ 1.48
CCDC42-203ENST00000581598 PDCD2LQ9BRP1 358 aa24.27■■□□□ 1.48
CCDC42-203ENST00000581598 MTIF3Q9H2K0 278 aaKnown RBP24.27■■□□□ 1.48
CCDC42-203ENST00000581598 TRMT13Q9NUP7 481 aaKnown RBP24.27■■□□□ 1.48
CCDC42-203ENST00000581598 PNMA6FA0A0J9YX94 578 aa24.26■■□□□ 1.47
CCDC42-203ENST00000581598 FGBP02675 491 aa24.26■■□□□ 1.47
CCDC42-203ENST00000581598 LY6KQ17RY6 165 aa24.26■■□□□ 1.47
CCDC42-203ENST00000581598 CHST3Q7LGC8 479 aa24.26■■□□□ 1.47
CCDC42-203ENST00000581598 RPUSD2Q8IZ73 545 aaKnown RBP24.26■■□□□ 1.47
CCDC42-203ENST00000581598 PIGSQ96S52 555 aa24.26■■□□□ 1.47
CCDC42-203ENST00000581598 LSG1Q9H089 658 aaKnown RBP24.26■■□□□ 1.47
CCDC42-203ENST00000581598 DDX41Q9UJV9 622 aaKnown RBP24.26■■□□□ 1.47
CCDC42-203ENST00000581598 PFKMP08237 780 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms