RNA–Protein interactions for RNA: ENST00000580004.1

NEK4P2-201, Transcript of NIMA-related kinase 4 pseudogene 2, humanhuman

BASIC

Gene NEK4P2, Length 1,012 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P2-201ENST00000580004 ARHGEF16Q5VV41 709 aa21.54■■□□□ 1.04
NEK4P2-201ENST00000580004 CCDC82Q8N4S0 544 aa21.54■■□□□ 1.04
NEK4P2-201ENST00000580004 CUL5Q93034 780 aa21.54■■□□□ 1.04
NEK4P2-201ENST00000580004 PXMP2Q9NR77 195 aa21.54■■□□□ 1.04
NEK4P2-201ENST00000580004 SYNRGQ9UMZ2 1314 aa21.54■■□□□ 1.04
NEK4P2-201ENST00000580004 ALPK3Q96L96 1907 aa21.53■■□□□ 1.04
NEK4P2-201ENST00000580004 NKRFO15226 690 aaKnown RBP eCLIP21.53■■□□□ 1.04
NEK4P2-201ENST00000580004 ANO1Q5XXA6 986 aa21.53■■□□□ 1.04
NEK4P2-201ENST00000580004 FBXO16Q8IX29 292 aaPredicted RBP21.53■■□□□ 1.04
NEK4P2-201ENST00000580004 SCFD2Q8WU76 684 aa21.53■■□□□ 1.04
NEK4P2-201ENST00000580004 PIBF1Q8WXW3 757 aa21.53■■□□□ 1.04
NEK4P2-201ENST00000580004 GLT8D2Q9H1C3 349 aa21.53■■□□□ 1.04
NEK4P2-201ENST00000580004 GNEQ9Y223 722 aaKnown RBP21.53■■□□□ 1.04
NEK4P2-201ENST00000580004 FRMPD4Q14CM0 1322 aa21.53■■□□□ 1.04
NEK4P2-201ENST00000580004 MOXD2PA6NHM9 499 aa21.52■■□□□ 1.04
NEK4P2-201ENST00000580004 EIF3JO75822 258 aaKnown RBP21.52■■□□□ 1.04
NEK4P2-201ENST00000580004 SEC24BO95487 1268 aa21.52■■□□□ 1.04
NEK4P2-201ENST00000580004 ADD1P35611 737 aaKnown RBP21.52■■□□□ 1.04
NEK4P2-201ENST00000580004 ADCYAP1R1P41586 468 aa21.52■■□□□ 1.04
NEK4P2-201ENST00000580004 DUSP28Q4G0W2 176 aa21.52■■□□□ 1.04
NEK4P2-201ENST00000580004 GJC2Q5T442 439 aaPredicted RBP21.52■■□□□ 1.04
NEK4P2-201ENST00000580004 PCSK9Q8NBP7 692 aaKnown RBP21.52■■□□□ 1.04
NEK4P2-201ENST00000580004 KLHDC9Q8NEP7 349 aa21.52■■□□□ 1.04
NEK4P2-201ENST00000580004 PHF24Q9UPV7 400 aa21.52■■□□□ 1.04
NEK4P2-201ENST00000580004 DNAH12Q6ZR08 3092 aa21.51■■□□□ 1.03
NEK4P2-201ENST00000580004 STAM2O75886 525 aa21.51■■□□□ 1.03
NEK4P2-201ENST00000580004 PGK1P00558 417 aa21.51■■□□□ 1.03
NEK4P2-201ENST00000580004 NR3C2P08235 984 aa21.51■■□□□ 1.03
NEK4P2-201ENST00000580004 IFNAR1P17181 557 aa21.51■■□□□ 1.03
NEK4P2-201ENST00000580004 HOXA13P31271 388 aaPredicted RBP21.51■■□□□ 1.03
NEK4P2-201ENST00000580004 EEPD1Q7L9B9 569 aa21.51■■□□□ 1.03
NEK4P2-201ENST00000580004 HEATR3Q7Z4Q2 680 aa21.51■■□□□ 1.03
NEK4P2-201ENST00000580004 PDCD2LQ9BRP1 358 aa21.51■■□□□ 1.03
NEK4P2-201ENST00000580004 RNF26Q9BY78 433 aaPredicted RBP21.51■■□□□ 1.03
NEK4P2-201ENST00000580004 PSTPIP2Q9H939 334 aa21.51■■□□□ 1.03
NEK4P2-201ENST00000580004 NR2E3Q9Y5X4 410 aa21.51■■□□□ 1.03
NEK4P2-201ENST00000580004 V9GY48 417 aaPredicted RBP21.51■■□□□ 1.03
NEK4P2-201ENST00000580004 MEIS2O14770 477 aa21.5■■□□□ 1.03
NEK4P2-201ENST00000580004 ADCY6O43306 1168 aa21.5■■□□□ 1.03
NEK4P2-201ENST00000580004 PRPF3O43395 683 aaKnown RBP21.5■■□□□ 1.03
NEK4P2-201ENST00000580004 SMPD1P17405 629 aa21.5■■□□□ 1.03
NEK4P2-201ENST00000580004 TTLL4Q14679 1199 aa21.5■■□□□ 1.03
NEK4P2-201ENST00000580004 NTRK3Q16288 839 aa21.5■■□□□ 1.03
NEK4P2-201ENST00000580004 C1orf53Q5VUE5 145 aa21.5■■□□□ 1.03
NEK4P2-201ENST00000580004 CCSAPQ6IQ19 270 aaPredicted RBP21.5■■□□□ 1.03
NEK4P2-201ENST00000580004 XRRA1Q6P2D8 792 aa21.5■■□□□ 1.03
NEK4P2-201ENST00000580004 IL27Q8NEV9 243 aa21.5■■□□□ 1.03
NEK4P2-201ENST00000580004 SMARCC2Q8TAQ2 1214 aa21.5■■□□□ 1.03
NEK4P2-201ENST00000580004 DPF3Q92784 378 aa21.5■■□□□ 1.03
NEK4P2-201ENST00000580004 WDR11Q9BZH6 1224 aa21.5■■□□□ 1.03
NEK4P2-201ENST00000580004 PDGFCQ9NRA1 345 aa21.5■■□□□ 1.03
NEK4P2-201ENST00000580004 BARHL2Q9NY43 387 aa21.5■■□□□ 1.03
NEK4P2-201ENST00000580004 C6orf222P0C671 652 aaPredicted RBP21.49■■□□□ 1.03
NEK4P2-201ENST00000580004 EIF2AK2P19525 551 aaKnown RBP21.49■■□□□ 1.03
NEK4P2-201ENST00000580004 AKAP17AQ02040 695 aaKnown RBP21.49■■□□□ 1.03
NEK4P2-201ENST00000580004 PGM5Q15124 567 aa21.49■■□□□ 1.03
NEK4P2-201ENST00000580004 PFKFB3Q16875 520 aaPredicted RBP21.49■■□□□ 1.03
NEK4P2-201ENST00000580004 PRPF38BQ5VTL8 546 aaKnown RBP21.49■■□□□ 1.03
NEK4P2-201ENST00000580004 WWC2Q6AWC2 1192 aa21.49■■□□□ 1.03
NEK4P2-201ENST00000580004 KCNV1Q6PIU1 500 aa21.49■■□□□ 1.03
NEK4P2-201ENST00000580004 CPLX2Q6PUV4 134 aaKnown RBP21.49■■□□□ 1.03
NEK4P2-201ENST00000580004 TLK2Q86UE8 772 aa21.49■■□□□ 1.03
NEK4P2-201ENST00000580004 VSIG10LQ86VR7 867 aa21.49■■□□□ 1.03
NEK4P2-201ENST00000580004 CCDC12Q8WUD4 166 aaPredicted RBP21.49■■□□□ 1.03
NEK4P2-201ENST00000580004 SENP6Q9GZR1 1112 aaPredicted RBP21.49■■□□□ 1.03
NEK4P2-201ENST00000580004 AP5M1Q9H0R1 490 aa21.49■■□□□ 1.03
NEK4P2-201ENST00000580004 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.48■■□□□ 1.03
NEK4P2-201ENST00000580004 hCG_1642624A0A1W2PR95 340 aa21.48■■□□□ 1.03
NEK4P2-201ENST00000580004 EVI5O60447 810 aa21.48■■□□□ 1.03
NEK4P2-201ENST00000580004 SCG2P13521 617 aa21.48■■□□□ 1.03
NEK4P2-201ENST00000580004 CCND2P30279 289 aa21.48■■□□□ 1.03
NEK4P2-201ENST00000580004 NAPAP54920 295 aa21.48■■□□□ 1.03
NEK4P2-201ENST00000580004 NOL8Q76FK4 1167 aaKnown RBP21.48■■□□□ 1.03
NEK4P2-201ENST00000580004 FAM177A1Q8N128 213 aaPredicted RBP21.48■■□□□ 1.03
NEK4P2-201ENST00000580004 LENG1Q96BZ8 264 aaPredicted RBP21.48■■□□□ 1.03
NEK4P2-201ENST00000580004 DDX49Q9Y6V7 483 aaKnown RBP21.48■■□□□ 1.03
NEK4P2-201ENST00000580004 CEP290O15078 2479 aa21.47■■□□□ 1.03
NEK4P2-201ENST00000580004 ESYT2A0FGR8 921 aa21.47■■□□□ 1.03
NEK4P2-201ENST00000580004 CPLX1O14810 134 aa21.47■■□□□ 1.03
NEK4P2-201ENST00000580004 ZEB2O60315 1214 aa21.47■■□□□ 1.03
NEK4P2-201ENST00000580004 ACLYP53396 1101 aa21.47■■□□□ 1.03
NEK4P2-201ENST00000580004 SNX17Q15036 470 aa21.47■■□□□ 1.03
NEK4P2-201ENST00000580004 GNASQ5JWF2 1037 aa21.47■■□□□ 1.03
NEK4P2-201ENST00000580004 FCHSD1Q86WN1 690 aa21.47■■□□□ 1.03
NEK4P2-201ENST00000580004 TRIM22Q8IYM9 498 aa21.47■■□□□ 1.03
NEK4P2-201ENST00000580004 GPKOWQ92917 476 aaPredicted RBP eCLIP21.47■■□□□ 1.03
NEK4P2-201ENST00000580004 RIC8AQ9NPQ8 531 aa21.47■■□□□ 1.03
NEK4P2-201ENST00000580004 STXBP3O00186 592 aa21.46■■□□□ 1.03
NEK4P2-201ENST00000580004 CTAGE5O15320 804 aa21.46■■□□□ 1.03
NEK4P2-201ENST00000580004 CABYRO75952 493 aa21.46■■□□□ 1.03
NEK4P2-201ENST00000580004 CDKL5O76039 1030 aa21.46■■□□□ 1.03
NEK4P2-201ENST00000580004 FOSP01100 380 aaPredicted RBP21.46■■□□□ 1.03
NEK4P2-201ENST00000580004 MYCNP04198 464 aaPredicted RBP21.46■■□□□ 1.03
NEK4P2-201ENST00000580004 TXNP10599 105 aaKnown RBP21.46■■□□□ 1.03
NEK4P2-201ENST00000580004 TGFB3P10600 412 aa21.46■■□□□ 1.03
NEK4P2-201ENST00000580004 RBM25P49756 843 aaKnown RBP21.46■■□□□ 1.03
NEK4P2-201ENST00000580004 CPT1AP50416 773 aa21.46■■□□□ 1.03
NEK4P2-201ENST00000580004 FSCN1Q16658 493 aaKnown RBP21.46■■□□□ 1.03
NEK4P2-201ENST00000580004 BRDTQ58F21 947 aaPredicted RBP21.46■■□□□ 1.03
NEK4P2-201ENST00000580004 MCTP2Q6DN12 878 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms