RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 TTLL1O95922 423 aa15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 IFIT2P09913 472 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 MCCP23508 829 aa15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 ALDH5A1P51649 535 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 FAM160B2Q86V87 743 aa15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 RPAP2Q8IXW5 612 aaPredicted RBP15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 GMCL1P1Q8NEA9 526 aa15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 MORC4Q8TE76 937 aa15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 STAG1Q8WVM7 1258 aa15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 DHX38Q92620 1227 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.7■□□□□ 0.12e-14■■□□□ 12.9
CDK5RAP3-213ENST00000579605 PUS7LQ9H0K6 701 aaKnown RBP15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 MTMR4Q9NYA4 1195 aa15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 CCPG1Q9ULG6 757 aa15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 TET1Q8NFU7 2136 aa15.7■□□□□ 0.1
CDK5RAP3-213ENST00000579605 BAZ2AQ9UIF9 1905 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-213ENST00000579605 RBM47A0AV96 593 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-213ENST00000579605 A6NJR5 290 aa15.69■□□□□ 0.1
CDK5RAP3-213ENST00000579605 CXCL10P02778 98 aa15.69■□□□□ 0.1
CDK5RAP3-213ENST00000579605 CKBP12277 381 aa15.69■□□□□ 0.1
CDK5RAP3-213ENST00000579605 PPP2R5BQ15173 497 aa15.69■□□□□ 0.1
CDK5RAP3-213ENST00000579605 KCTD1Q719H9 257 aa15.69■□□□□ 0.1
CDK5RAP3-213ENST00000579605 RPAINQ86UA6 219 aa15.69■□□□□ 0.1
CDK5RAP3-213ENST00000579605 MYOCDQ8IZQ8 938 aa15.69■□□□□ 0.1
CDK5RAP3-213ENST00000579605 RHPN1Q8TCX5 695 aa15.69■□□□□ 0.1
CDK5RAP3-213ENST00000579605 ATOH1Q92858 354 aaPredicted RBP15.69■□□□□ 0.1
CDK5RAP3-213ENST00000579605 CTAGE1Q96RT6 745 aa15.69■□□□□ 0.1
CDK5RAP3-213ENST00000579605 PRRX2Q99811 253 aa15.69■□□□□ 0.1
CDK5RAP3-213ENST00000579605 NSUN3Q9H649 340 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-213ENST00000579605 ADD3Q9UEY8 706 aaKnown RBP15.69■□□□□ 0.1
CDK5RAP3-213ENST00000579605 STXBP3O00186 592 aa15.68■□□□□ 0.1
CDK5RAP3-213ENST00000579605 EFCAB14O75071 495 aa15.68■□□□□ 0.1
CDK5RAP3-213ENST00000579605 SLC1A4P43007 532 aa15.68■□□□□ 0.1
CDK5RAP3-213ENST00000579605 PDE4BQ07343 736 aa15.68■□□□□ 0.1
CDK5RAP3-213ENST00000579605 TRIM67Q6ZTA4 783 aa15.68■□□□□ 0.1
CDK5RAP3-213ENST00000579605 BMP8AQ7Z5Y6 402 aa15.68■□□□□ 0.1
CDK5RAP3-213ENST00000579605 CLASRPQ8N2M8 674 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP3-213ENST00000579605 POP1Q99575 1024 aaKnown RBP15.68■□□□□ 0.1
CDK5RAP3-213ENST00000579605 MTMR7Q9Y216 660 aa15.68■□□□□ 0.1
CDK5RAP3-213ENST00000579605 PTPDC1A2A3K4 754 aa15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 H3BNC9 293 aa15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 MBTPS2O43462 519 aa15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 CSPG5O95196 566 aa15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 AMHP03971 560 aa15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 TXNP10599 105 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 CALML3P27482 149 aa15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 LTBRP36941 435 aa15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 DLX2Q07687 328 aaPredicted RBP15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 PDE4DQ08499 809 aa15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 UBE3CQ15386 1083 aa15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 SMAD2Q15796 467 aaKnown RBP15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 SBK1Q52WX2 424 aa15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 ITPRIPQ8IWB1 547 aa15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 IGFLR1Q9H665 355 aa15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 PRR12Q9ULL5 1215 aa15.67■□□□□ 0.1
CDK5RAP3-213ENST00000579605 CFAP54Q96N23 3096 aa15.66■□□□□ 0.1
CDK5RAP3-213ENST00000579605 PTPRSQ13332 1948 aa15.66■□□□□ 0.1
CDK5RAP3-213ENST00000579605 ZNF318Q5VUA4 2279 aa15.66■□□□□ 0.1
CDK5RAP3-213ENST00000579605 NKRFO15226 690 aaKnown RBP eCLIP15.66■□□□□ 0.1
CDK5RAP3-213ENST00000579605 UPP2O95045 317 aa15.66■□□□□ 0.1
CDK5RAP3-213ENST00000579605 PARNO95453 639 aaKnown RBP15.66■□□□□ 0.1
CDK5RAP3-213ENST00000579605 ZKSCAN2Q63HK3 967 aa15.66■□□□□ 0.1
CDK5RAP3-213ENST00000579605 CEP85Q6P2H3 762 aa15.66■□□□□ 0.1
CDK5RAP3-213ENST00000579605 TMEM192Q8IY95 271 aa15.66■□□□□ 0.1
CDK5RAP3-213ENST00000579605 YME1L1Q96TA2 773 aa15.66■□□□□ 0.1
CDK5RAP3-213ENST00000579605 GSG1L2A8MUP6 293 aa15.65■□□□□ 0.1
CDK5RAP3-213ENST00000579605 NFIBO00712 420 aa15.65■□□□□ 0.1
CDK5RAP3-213ENST00000579605 TSPY3P0CV98 308 aa15.65■□□□□ 0.1
CDK5RAP3-213ENST00000579605 TSPY8P0CW00 308 aa15.65■□□□□ 0.1
CDK5RAP3-213ENST00000579605 HTRA4P83105 476 aaPredicted RBP15.65■□□□□ 0.1
CDK5RAP3-213ENST00000579605 PKN1Q16512 942 aa15.65■□□□□ 0.1
CDK5RAP3-213ENST00000579605 ZNF618Q5T7W0 954 aa15.65■□□□□ 0.1
CDK5RAP3-213ENST00000579605 CHST3Q7LGC8 479 aa15.65■□□□□ 0.1
CDK5RAP3-213ENST00000579605 FBXL6Q8N531 539 aa15.65■□□□□ 0.1
CDK5RAP3-213ENST00000579605 SCFD2Q8WU76 684 aa15.65■□□□□ 0.1
CDK5RAP3-213ENST00000579605 AFG1LQ8WV93 481 aa15.65■□□□□ 0.1
CDK5RAP3-213ENST00000579605 GMCL1Q96IK5 515 aa15.65■□□□□ 0.1
CDK5RAP3-213ENST00000579605 SAMD11Q96NU1 681 aa15.65■□□□□ 0.1
CDK5RAP3-213ENST00000579605 STRBPQ96SI9 672 aaKnown RBP15.65■□□□□ 0.1
CDK5RAP3-213ENST00000579605 ALG1Q9BT22 464 aa15.65■□□□□ 0.1
CDK5RAP3-213ENST00000579605 LGR5O75473 907 aa15.64■□□□□ 0.09
CDK5RAP3-213ENST00000579605 COL19A1Q14993 1142 aa15.64■□□□□ 0.09
CDK5RAP3-213ENST00000579605 HSP90AB4PQ58FF6 505 aa15.64■□□□□ 0.09
CDK5RAP3-213ENST00000579605 RCSD1Q6JBY9 416 aa15.64■□□□□ 0.09
CDK5RAP3-213ENST00000579605 SLC30A10Q6XR72 485 aa15.64■□□□□ 0.09
CDK5RAP3-213ENST00000579605 RASGRP2Q7LDG7 609 aa15.64■□□□□ 0.09
CDK5RAP3-213ENST00000579605 FBXO11Q86XK2 927 aa15.64■□□□□ 0.09
CDK5RAP3-213ENST00000579605 C7orf31Q8N865 590 aa15.64■□□□□ 0.09
CDK5RAP3-213ENST00000579605 DBF4BQ8NFT6 615 aa15.64■□□□□ 0.09
CDK5RAP3-213ENST00000579605 SP7Q8TDD2 431 aaPredicted RBP15.64■□□□□ 0.09
CDK5RAP3-213ENST00000579605 ZNF287Q9HBT7 754 aa15.64■□□□□ 0.09
CDK5RAP3-213ENST00000579605 HDAC6Q9UBN7 1215 aa15.64■□□□□ 0.09
CDK5RAP3-213ENST00000579605 SYNPO2Q9UMS6 1093 aa15.64■□□□□ 0.09
CDK5RAP3-213ENST00000579605 ZFHX2Q9C0A1 2572 aaPredicted RBP15.64■□□□□ 0.09
CDK5RAP3-213ENST00000579605 CACNA1AO00555 2505 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 TANC1Q9C0D5 1861 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 H0Y858 1186 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 NCK2O43639 380 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 ARIH2O95376 493 aa15.63■□□□□ 0.09
CDK5RAP3-213ENST00000579605 APPP05067 770 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms