RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 CD207Q9UJ71 328 aa13.36□□□□□ -0.27
GGA3-206ENST00000578773 Q9Y3F1 56 aa13.36□□□□□ -0.27
GGA3-206ENST00000578773 KIAA1217Q5T5P2 1943 aa13.35□□□□□ -0.27
GGA3-206ENST00000578773 GRM6O15303 877 aa13.35□□□□□ -0.27
GGA3-206ENST00000578773 ZBED4O75132 1171 aa13.35□□□□□ -0.27
GGA3-206ENST00000578773 SELPP16109 830 aa13.35□□□□□ -0.27
GGA3-206ENST00000578773 PTGISQ16647 500 aa13.35□□□□□ -0.27
GGA3-206ENST00000578773 NFRKBQ6P4R8 1299 aa13.35□□□□□ -0.27
GGA3-206ENST00000578773 TMEM192Q8IY95 271 aa13.35□□□□□ -0.27
GGA3-206ENST00000578773 MYOCDQ8IZQ8 938 aa13.35□□□□□ -0.27
GGA3-206ENST00000578773 PRPF38AQ8NAV1 312 aaKnown RBP13.35□□□□□ -0.27
GGA3-206ENST00000578773 OR6J1Q8NGC5 347 aa13.35□□□□□ -0.27
GGA3-206ENST00000578773 AFAP1L1Q8TED9 768 aa13.35□□□□□ -0.27
GGA3-206ENST00000578773 CRNKL1Q9BZJ0 848 aaKnown RBP13.35□□□□□ -0.27
GGA3-206ENST00000578773 ARMT1Q9H993 441 aa13.35□□□□□ -0.27
GGA3-206ENST00000578773 RNF146Q9NTX7 359 aa13.35□□□□□ -0.27
GGA3-206ENST00000578773 CTNNA3Q9UI47 895 aa13.35□□□□□ -0.27
GGA3-206ENST00000578773 NOB1Q9ULX3 412 aaKnown RBP13.35□□□□□ -0.27
GGA3-206ENST00000578773 INSL6Q9Y581 213 aa13.35□□□□□ -0.27
GGA3-206ENST00000578773 CHD8Q9HCK8 2581 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 ABHD14A-ACY1A0A1B0GW23 586 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 ASB14A6NK59 587 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 F5H6K3 240 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 CHGBP05060 677 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 CKBP12277 381 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 KLRC3Q07444 240 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 LRRFIP1Q32MZ4 808 aaKnown RBP13.34□□□□□ -0.27
GGA3-206ENST00000578773 DGLUCYQ7Z3D6 616 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 FBXO11Q86XK2 927 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 CERS3Q8IU89 383 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 MSLNLQ96KJ4 702 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 ACAD9Q9H845 621 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 KANSL2Q9H9L4 492 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 INCENPQ9NQS7 918 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 SMC4Q9NTJ3 1288 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 FBXO40Q9UH90 709 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 TNNQ9UQP3 1299 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 NOD1Q9Y239 953 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 COG6Q9Y2V7 657 aa13.34□□□□□ -0.27
GGA3-206ENST00000578773 TCRBV5S4A2TA0A5A2 114 aa13.33□□□□□ -0.28
GGA3-206ENST00000578773 LINC00271P0C7V0 271 aa13.33□□□□□ -0.28
GGA3-206ENST00000578773 PDE6AP16499 860 aa13.33□□□□□ -0.28
GGA3-206ENST00000578773 RRP1P56182 461 aaKnown RBP13.33□□□□□ -0.28
GGA3-206ENST00000578773 CBX2Q14781 532 aaPredicted RBP13.33□□□□□ -0.28
GGA3-206ENST00000578773 C16orf86Q6ZW13 317 aa13.33□□□□□ -0.28
GGA3-206ENST00000578773 STK11IPQ8N1F8 1099 aa13.33□□□□□ -0.28
GGA3-206ENST00000578773 NKD2Q969F2 451 aaPredicted RBP13.33□□□□□ -0.28
GGA3-206ENST00000578773 WDR11Q9BZH6 1224 aa13.33□□□□□ -0.28
GGA3-206ENST00000578773 SMOC2Q9H3U7 446 aa13.33□□□□□ -0.28
GGA3-206ENST00000578773 GPR108Q9NPR9 543 aa13.33□□□□□ -0.28
GGA3-206ENST00000578773 CLEC1BQ9P126 229 aa13.33□□□□□ -0.28
GGA3-206ENST00000578773 ZNF532Q9HCE3 1301 aa13.33□□□□□ -0.28
GGA3-206ENST00000578773 ATRXP46100 2492 aa13.33□□□□□ -0.28
GGA3-206ENST00000578773 IKBKEQ14164 716 aa13.32□□□□□ -0.28
GGA3-206ENST00000578773 TRIM71Q2Q1W2 868 aaKnown RBP13.32□□□□□ -0.28
GGA3-206ENST00000578773 C12orf60Q5U649 245 aa13.32□□□□□ -0.28
GGA3-206ENST00000578773 ADGRD2Q7Z7M1 963 aa13.32□□□□□ -0.28
GGA3-206ENST00000578773 EAF2Q96CJ1 260 aaPredicted RBP13.32□□□□□ -0.28
GGA3-206ENST00000578773 RPGRIP1Q96KN7 1286 aa13.32□□□□□ -0.28
GGA3-206ENST00000578773 CCDC17Q96LX7 622 aa13.32□□□□□ -0.28
GGA3-206ENST00000578773 IRF2BPLQ9H1B7 796 aa13.32□□□□□ -0.28
GGA3-206ENST00000578773 VTA1Q9NP79 307 aa13.32□□□□□ -0.28
GGA3-206ENST00000578773 CYP39A1Q9NYL5 469 aa13.32□□□□□ -0.28
GGA3-206ENST00000578773 CTDP1Q9Y5B0 961 aaPredicted RBP13.32□□□□□ -0.28
GGA3-206ENST00000578773 UPP2O95045 317 aa13.31□□□□□ -0.28
GGA3-206ENST00000578773 ALAS1P13196 640 aa13.31□□□□□ -0.28
GGA3-206ENST00000578773 CPT1AP50416 773 aa13.31□□□□□ -0.28
GGA3-206ENST00000578773 RBM10P98175 930 aaKnown RBP13.31□□□□□ -0.28
GGA3-206ENST00000578773 ZNF200P98182 395 aaPredicted RBP13.31□□□□□ -0.28
GGA3-206ENST00000578773 ADAM15Q13444 863 aa13.31□□□□□ -0.28
GGA3-206ENST00000578773 HIC1Q14526 733 aa13.31□□□□□ -0.28
GGA3-206ENST00000578773 ZNF618Q5T7W0 954 aa13.31□□□□□ -0.28
GGA3-206ENST00000578773 RASGRP2Q7LDG7 609 aa13.31□□□□□ -0.28
GGA3-206ENST00000578773 CAGE1Q8TC20 777 aa13.31□□□□□ -0.28
GGA3-206ENST00000578773 MORC4Q8TE76 937 aa13.31□□□□□ -0.28
GGA3-206ENST00000578773 GPHNQ9NQX3 736 aaPredicted RBP13.31□□□□□ -0.28
GGA3-206ENST00000578773 USP15Q9Y4E8 981 aaPredicted RBP13.31□□□□□ -0.28
GGA3-206ENST00000578773 FANCMQ8IYD8 2048 aa13.3□□□□□ -0.28
GGA3-206ENST00000578773 USP17L12C9JPN9 530 aa13.3□□□□□ -0.28
GGA3-206ENST00000578773 USP17L21D6R901 530 aa13.3□□□□□ -0.28
GGA3-206ENST00000578773 ARIH2O95376 493 aa13.3□□□□□ -0.28
GGA3-206ENST00000578773 EYA4O95677 639 aa13.3□□□□□ -0.28
GGA3-206ENST00000578773 GLP2RO95838 553 aa13.3□□□□□ -0.28
GGA3-206ENST00000578773 CTNNB1P35222 781 aa13.3□□□□□ -0.28
GGA3-206ENST00000578773 PTPN11Q06124 597 aaPredicted RBP13.3□□□□□ -0.28
GGA3-206ENST00000578773 RBL2Q08999 1139 aa13.3□□□□□ -0.28
GGA3-206ENST00000578773 CAMK1Q14012 370 aa13.3□□□□□ -0.28
GGA3-206ENST00000578773 COL9A2Q14055 689 aaPredicted RBP13.3□□□□□ -0.28
GGA3-206ENST00000578773 KIAA2013Q8IYS2 634 aa13.3□□□□□ -0.28
GGA3-206ENST00000578773 LRRC47Q8N1G4 583 aaKnown RBP13.3□□□□□ -0.28
GGA3-206ENST00000578773 DBF4BQ8NFT6 615 aa13.3□□□□□ -0.28
GGA3-206ENST00000578773 KAT2BQ92831 832 aa13.3□□□□□ -0.28
GGA3-206ENST00000578773 RIPOR3Q96MK2 946 aa13.3□□□□□ -0.28
GGA3-206ENST00000578773 TRERF1Q96PN7 1200 aa13.3□□□□□ -0.28
GGA3-206ENST00000578773 BARX2Q9UMQ3 279 aaPredicted RBP13.3□□□□□ -0.28
GGA3-206ENST00000578773 PCDHGC5Q9Y5F6 944 aa13.3□□□□□ -0.28
GGA3-206ENST00000578773 RBM47A0AV96 593 aaKnown RBP13.29□□□□□ -0.28
GGA3-206ENST00000578773 A6NJR5 290 aa13.29□□□□□ -0.28
GGA3-206ENST00000578773 MBD4O95243 580 aa13.29□□□□□ -0.28
GGA3-206ENST00000578773 RASA1P20936 1047 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms