RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 LIFRP42702 1097 aa26.66■■□□□ 1.86
VAPA-205ENST00000578314 HSD17B4P51659 736 aa26.66■■□□□ 1.86
VAPA-205ENST00000578314 FAAP100Q0VG06 881 aa26.66■■□□□ 1.86
VAPA-205ENST00000578314 SCFD2Q8WU76 684 aa26.66■■□□□ 1.86
VAPA-205ENST00000578314 RMDN3Q96TC7 470 aa26.66■■□□□ 1.86
VAPA-205ENST00000578314 MROH7Q68CQ1 1323 aa26.65■■□□□ 1.86
VAPA-205ENST00000578314 NKRFO15226 690 aaKnown RBP eCLIP26.65■■□□□ 1.862e-10■■■□□ 15
VAPA-205ENST00000578314 CFBP00751 764 aa26.65■■□□□ 1.86
VAPA-205ENST00000578314 SMARCA1P28370 1054 aa26.65■■□□□ 1.86
VAPA-205ENST00000578314 TSGA10IPQ3SY00 556 aa26.65■■□□□ 1.86
VAPA-205ENST00000578314 CXCL17Q6UXB2 119 aa26.65■■□□□ 1.86
VAPA-205ENST00000578314 HOMER1Q86YM7 354 aa26.65■■□□□ 1.86
VAPA-205ENST00000578314 SLC43A3Q8NBI5 491 aa26.65■■□□□ 1.86
VAPA-205ENST00000578314 BADQ92934 168 aa26.65■■□□□ 1.86
VAPA-205ENST00000578314 KIF5BP33176 963 aa26.64■■□□□ 1.86
VAPA-205ENST00000578314 CTCFLQ8NI51 663 aaPredicted RBP26.64■■□□□ 1.86
VAPA-205ENST00000578314 TMEM39AQ9NV64 488 aa26.64■■□□□ 1.86
VAPA-205ENST00000578314 CCDC69A6NI79 296 aa26.63■■□□□ 1.85
VAPA-205ENST00000578314 NEFLP07196 543 aa26.63■■□□□ 1.85
VAPA-205ENST00000578314 ITGB8P26012 769 aa26.63■■□□□ 1.85
VAPA-205ENST00000578314 PPP2R5BQ15173 497 aa26.63■■□□□ 1.85
VAPA-205ENST00000578314 STXBP2Q15833 593 aa26.63■■□□□ 1.85
VAPA-205ENST00000578314 NFXL1Q6ZNB6 911 aa26.63■■□□□ 1.85
VAPA-205ENST00000578314 LZTS2Q9BRK4 669 aa26.63■■□□□ 1.85
VAPA-205ENST00000578314 MYL10Q9BUA6 226 aa26.63■■□□□ 1.85
VAPA-205ENST00000578314 SPZ1Q9BXG8 430 aa26.63■■□□□ 1.85
VAPA-205ENST00000578314 SEZ6LQ9BYH1 1024 aa26.63■■□□□ 1.85
VAPA-205ENST00000578314 TTLL4Q14679 1199 aa26.62■■□□□ 1.85
VAPA-205ENST00000578314 ARHGEF16Q5VV41 709 aa26.62■■□□□ 1.85
VAPA-205ENST00000578314 PXMP2Q9NR77 195 aa26.62■■□□□ 1.85
VAPA-205ENST00000578314 CALM1P0DP23 149 aa26.61■■□□□ 1.85
VAPA-205ENST00000578314 CALM2P0DP24 149 aa26.61■■□□□ 1.85
VAPA-205ENST00000578314 CALM3P0DP25 149 aa26.61■■□□□ 1.85
VAPA-205ENST00000578314 TXNP10599 105 aaKnown RBP26.61■■□□□ 1.85
VAPA-205ENST00000578314 GNAQP50148 359 aa26.61■■□□□ 1.85
VAPA-205ENST00000578314 CPT1AP50416 773 aa26.61■■□□□ 1.85
VAPA-205ENST00000578314 CCDC62Q6P9F0 684 aa26.61■■□□□ 1.85
VAPA-205ENST00000578314 SGMS1Q86VZ5 419 aa26.61■■□□□ 1.85
VAPA-205ENST00000578314 FAM126BQ8IXS8 530 aa26.61■■□□□ 1.85
VAPA-205ENST00000578314 RASEFQ8IZ41 740 aa26.61■■□□□ 1.85
VAPA-205ENST00000578314 OR6J1Q8NGC5 347 aa26.61■■□□□ 1.85
VAPA-205ENST00000578314 NEK1Q96PY6 1258 aa26.61■■□□□ 1.85
VAPA-205ENST00000578314 TBX21Q9UL17 535 aa26.61■■□□□ 1.85
VAPA-205ENST00000578314 GRIN2DO15399 1336 aa26.61■■□□□ 1.85
VAPA-205ENST00000578314 EIF3JO75822 258 aaKnown RBP26.6■■□□□ 1.85
VAPA-205ENST00000578314 NR3C2P08235 984 aa26.6■■□□□ 1.85
VAPA-205ENST00000578314 RAG1P15918 1043 aa26.6■■□□□ 1.85
VAPA-205ENST00000578314 EIF2AK2P19525 551 aaKnown RBP26.6■■□□□ 1.85
VAPA-205ENST00000578314 EXOSC10Q01780 885 aaKnown RBP26.6■■□□□ 1.85
VAPA-205ENST00000578314 ITGA7Q13683 1181 aa26.6■■□□□ 1.85
VAPA-205ENST00000578314 LRRC2Q9BYS8 371 aa26.6■■□□□ 1.85
VAPA-205ENST00000578314 POLR3EQ9NVU0 708 aa26.6■■□□□ 1.85
VAPA-205ENST00000578314 LAMA2P24043 3122 aaKnown RBP26.6■■□□□ 1.85
VAPA-205ENST00000578314 A6NJR5 290 aa26.59■■□□□ 1.85
VAPA-205ENST00000578314 GCOM1H8Y6P7 765 aaPredicted RBP26.59■■□□□ 1.85
VAPA-205ENST00000578314 ARIH2O95376 493 aa26.59■■□□□ 1.85
VAPA-205ENST00000578314 POLR2MP0CAP2 368 aa26.59■■□□□ 1.85
VAPA-205ENST00000578314 DEFB123Q8N688 67 aa26.59■■□□□ 1.85
VAPA-205ENST00000578314 COPS5Q92905 334 aa26.59■■□□□ 1.85
VAPA-205ENST00000578314 SLC12A7Q9Y666 1083 aa26.59■■□□□ 1.85
VAPA-205ENST00000578314 TLR3O15455 904 aaKnown RBP26.58■■□□□ 1.85
VAPA-205ENST00000578314 TIMP1P01033 207 aa26.58■■□□□ 1.85
VAPA-205ENST00000578314 CD4P01730 458 aa26.58■■□□□ 1.85
VAPA-205ENST00000578314 HOXA13P31271 388 aaPredicted RBP26.58■■□□□ 1.85
VAPA-205ENST00000578314 KRT32Q14532 448 aa26.58■■□□□ 1.85
VAPA-205ENST00000578314 BRDTQ58F21 947 aaPredicted RBP26.58■■□□□ 1.85
VAPA-205ENST00000578314 DHX32Q7L7V1 743 aaKnown RBP26.58■■□□□ 1.85
VAPA-205ENST00000578314 SRBD1Q8N5C6 995 aaKnown RBP26.58■■□□□ 1.85
VAPA-205ENST00000578314 KCNB2Q92953 911 aa26.58■■□□□ 1.85
VAPA-205ENST00000578314 RRP36Q96EU6 259 aaKnown RBP26.58■■□□□ 1.85
VAPA-205ENST00000578314 PDCD2LQ9BRP1 358 aa26.58■■□□□ 1.85
VAPA-205ENST00000578314 PURAQ00577 322 aaKnown RBP26.57■■□□□ 1.84
VAPA-205ENST00000578314 ADCK5Q3MIX3 580 aa26.57■■□□□ 1.84
VAPA-205ENST00000578314 SEPT14Q6ZU15 432 aa26.57■■□□□ 1.84
VAPA-205ENST00000578314 Q7L0L9 218 aa26.57■■□□□ 1.84
VAPA-205ENST00000578314 FANCBQ8NB91 859 aa26.57■■□□□ 1.84
VAPA-205ENST00000578314 COL6A3P12111 3177 aa26.56■■□□□ 1.84
VAPA-205ENST00000578314 KPNA6O60684 536 aa26.56■■□□□ 1.84
VAPA-205ENST00000578314 PLEKHA8P1O95397 391 aa26.56■■□□□ 1.84
VAPA-205ENST00000578314 RXRAP19793 462 aa26.56■■□□□ 1.84
VAPA-205ENST00000578314 PSMC6P62333 389 aa26.56■■□□□ 1.84
VAPA-205ENST00000578314 SHHQ15465 462 aa26.56■■□□□ 1.84
VAPA-205ENST00000578314 VSIG10LQ86VR7 867 aa26.56■■□□□ 1.84
VAPA-205ENST00000578314 PIBF1Q8WXW3 757 aa26.56■■□□□ 1.84
VAPA-205ENST00000578314 LY6KQ17RY6 165 aa26.55■■□□□ 1.84
VAPA-205ENST00000578314 MTG1Q9BT17 334 aaPredicted RBP26.55■■□□□ 1.84
VAPA-205ENST00000578314 DDX41Q9UJV9 622 aaKnown RBP26.55■■□□□ 1.84
VAPA-205ENST00000578314 GH1P01241 217 aa26.54■■□□□ 1.84
VAPA-205ENST00000578314 MYL3P08590 195 aa26.54■■□□□ 1.84
VAPA-205ENST00000578314 HMGB1P09429 215 aaKnown RBP26.54■■□□□ 1.84
VAPA-205ENST00000578314 FPGSQ05932 587 aa26.54■■□□□ 1.84
VAPA-205ENST00000578314 PGM5Q15124 567 aa26.54■■□□□ 1.84
VAPA-205ENST00000578314 C9orf50Q5SZB4 431 aa26.54■■□□□ 1.84
VAPA-205ENST00000578314 MFSD5Q6N075 450 aa26.54■■□□□ 1.84
VAPA-205ENST00000578314 CMTR1Q8N1G2 835 aaKnown RBP26.54■■□□□ 1.84
VAPA-205ENST00000578314 SEC63Q9UGP8 760 aaKnown RBP26.54■■□□□ 1.84
VAPA-205ENST00000578314 BAZ2BQ9UIF8 2168 aaKnown RBP26.54■■□□□ 1.84
VAPA-205ENST00000578314 RGS20O76081 388 aa26.53■■□□□ 1.84
VAPA-205ENST00000578314 HSPA4P34932 840 aa26.53■■□□□ 1.84
VAPA-205ENST00000578314 EPHB4P54760 987 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms