RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 RNF146Q9NTX7 359 aa21.01■□□□□ 0.95
PRKCA-203ENST00000578063 RABGAP1Q9Y3P9 1069 aa21.01■□□□□ 0.95
PRKCA-203ENST00000578063 CIITAP33076 1130 aa21.01■□□□□ 0.95
PRKCA-203ENST00000578063 MOGSQ13724 837 aa21.01■□□□□ 0.95
PRKCA-203ENST00000578063 MUM1L1Q5H9M0 696 aa21.01■□□□□ 0.95
PRKCA-203ENST00000578063 EPSTI1Q96J88 318 aa21.01■□□□□ 0.95
PRKCA-203ENST00000578063 A0A0G2JMZ2 1700 aa21.01■□□□□ 0.95
PRKCA-203ENST00000578063 RBBP6Q7Z6E9 1792 aaKnown RBP21■□□□□ 0.95
PRKCA-203ENST00000578063 MYH7BA7E2Y1 1941 aa21■□□□□ 0.95
PRKCA-203ENST00000578063 FSD2A1L4K1 749 aa21■□□□□ 0.95
PRKCA-203ENST00000578063 ITGBL1O95965 494 aaPredicted RBP21■□□□□ 0.95
PRKCA-203ENST00000578063 TMEM266Q2M3C6 531 aa21■□□□□ 0.95
PRKCA-203ENST00000578063 USP49Q70CQ1 688 aa21■□□□□ 0.95
PRKCA-203ENST00000578063 ELOA2Q8IYF1 753 aaPredicted RBP21■□□□□ 0.95
PRKCA-203ENST00000578063 SMCHD1A6NHR9 2005 aa20.99■□□□□ 0.95
PRKCA-203ENST00000578063 STAT3P40763 770 aa20.99■□□□□ 0.95
PRKCA-203ENST00000578063 FXR2P51116 673 aaKnown RBP eCLIP20.99■□□□□ 0.95
PRKCA-203ENST00000578063 Q4G0T1 1027 aa20.99■□□□□ 0.95
PRKCA-203ENST00000578063 KRBA2Q6ZNG9 492 aa20.99■□□□□ 0.95
PRKCA-203ENST00000578063 GAS2L3Q86XJ1 694 aa20.99■□□□□ 0.95
PRKCA-203ENST00000578063 CKAP2LQ8IYA6 745 aa20.99■□□□□ 0.95
PRKCA-203ENST00000578063 CCDC34Q96HJ3 373 aa20.99■□□□□ 0.95
PRKCA-203ENST00000578063 RAB34Q9BZG1 259 aa20.99■□□□□ 0.95
PRKCA-203ENST00000578063 ASCC2Q9H1I8 757 aaPredicted RBP20.99■□□□□ 0.95
PRKCA-203ENST00000578063 TSPY26PQ9H489 355 aa20.99■□□□□ 0.95
PRKCA-203ENST00000578063 USP25Q9UHP3 1055 aa20.99■□□□□ 0.95
PRKCA-203ENST00000578063 POLR2DO15514 142 aaKnown RBP20.98■□□□□ 0.95
PRKCA-203ENST00000578063 CCDC192P0DO97 292 aa20.98■□□□□ 0.95
PRKCA-203ENST00000578063 OSBPP22059 807 aa20.98■□□□□ 0.95
PRKCA-203ENST00000578063 CNNM3Q8NE01 707 aa20.98■□□□□ 0.95
PRKCA-203ENST00000578063 HOOK1Q9UJC3 728 aaKnown RBP20.98■□□□□ 0.95
PRKCA-203ENST00000578063 RIPK3Q9Y572 518 aa20.98■□□□□ 0.95
PRKCA-203ENST00000578063 RPTORQ8N122 1335 aa20.98■□□□□ 0.95
PRKCA-203ENST00000578063 TBX3O15119 743 aa20.98■□□□□ 0.95
PRKCA-203ENST00000578063 TXKP42681 527 aa20.98■□□□□ 0.95
PRKCA-203ENST00000578063 GTF2A2P52657 109 aa20.98■□□□□ 0.95
PRKCA-203ENST00000578063 RNF207Q6ZRF8 634 aa20.98■□□□□ 0.95
PRKCA-203ENST00000578063 IGSF22Q8N9C0 903 aa20.98■□□□□ 0.95
PRKCA-203ENST00000578063 SYTL5Q8TDW5 730 aaPredicted RBP20.98■□□□□ 0.95
PRKCA-203ENST00000578063 FUCA2Q9BTY2 467 aa20.98■□□□□ 0.95
PRKCA-203ENST00000578063 ACAD9Q9H845 621 aa20.98■□□□□ 0.95
PRKCA-203ENST00000578063 GPBP1L1Q9HC44 474 aaPredicted RBP20.98■□□□□ 0.95
PRKCA-203ENST00000578063 KCNMB3Q9NPA1 279 aa20.98■□□□□ 0.95
PRKCA-203ENST00000578063 COL11A1P12107 1806 aaPredicted RBP20.98■□□□□ 0.95
PRKCA-203ENST00000578063 MARCH6O60337 910 aa20.97■□□□□ 0.95
PRKCA-203ENST00000578063 CETPP11597 493 aa20.97■□□□□ 0.95
PRKCA-203ENST00000578063 ZNF76P36508 570 aa20.97■□□□□ 0.95
PRKCA-203ENST00000578063 UBA7P41226 1012 aa20.97■□□□□ 0.95
PRKCA-203ENST00000578063 HERVK_113P62684 666 aa20.97■□□□□ 0.95
PRKCA-203ENST00000578063 RPS6P62753 249 aaKnown RBP20.97■□□□□ 0.95
PRKCA-203ENST00000578063 PLS1Q14651 629 aa20.97■□□□□ 0.95
PRKCA-203ENST00000578063 LONRF3Q496Y0 759 aa20.97■□□□□ 0.95
PRKCA-203ENST00000578063 GPAT2Q6NUI2 795 aa20.97■□□□□ 0.95
PRKCA-203ENST00000578063 KANK3Q6NY19 840 aa20.97■□□□□ 0.95
PRKCA-203ENST00000578063 SLFN12Q8IYM2 578 aa20.97■□□□□ 0.95
PRKCA-203ENST00000578063 CCSER1Q9C0I3 900 aa20.97■□□□□ 0.95
PRKCA-203ENST00000578063 FRMPD4Q14CM0 1322 aa20.97■□□□□ 0.95
PRKCA-203ENST00000578063 ZBTB48P10074 688 aaPredicted RBP20.96■□□□□ 0.95
PRKCA-203ENST00000578063 TECP42680 631 aa20.96■□□□□ 0.95
PRKCA-203ENST00000578063 PRR16Q569H4 304 aa20.96■□□□□ 0.95
PRKCA-203ENST00000578063 SASS6Q6UVJ0 657 aa20.96■□□□□ 0.95
PRKCA-203ENST00000578063 NSMFQ6X4W1 530 aa20.96■□□□□ 0.95
PRKCA-203ENST00000578063 PDILTQ8N807 584 aa20.96■□□□□ 0.95
PRKCA-203ENST00000578063 CHST13Q8NET6 341 aa20.96■□□□□ 0.95
PRKCA-203ENST00000578063 HAS1Q92839 578 aa20.96■□□□□ 0.95
PRKCA-203ENST00000578063 COL20A1Q9P218 1284 aa20.96■□□□□ 0.95
PRKCA-203ENST00000578063 PNMA3Q9UL41 463 aa20.96■□□□□ 0.95
PRKCA-203ENST00000578063 FAM86B1E9PN63 330 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 ACTN4O43707 911 aaKnown RBP20.95■□□□□ 0.94
PRKCA-203ENST00000578063 FAM86B2P0C5J1 330 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 PDIA5Q14554 519 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 CST9Q5W186 159 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 SLC30A10Q6XR72 485 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 RIOX2Q8IUF8 465 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 IQUBQ8NA54 791 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 GTF3C2Q8WUA4 911 aaPredicted RBP20.95■□□□□ 0.94
PRKCA-203ENST00000578063 LENG9Q96B70 501 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 TTC12Q9H892 705 aaPredicted RBP20.95■□□□□ 0.94
PRKCA-203ENST00000578063 FBXO40Q9UH90 709 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 SLC45A1Q9Y2W3 748 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 A0A087X0B3 334 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 SLFN14P0C7P3 912 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 CEP57L1Q8IYX8 460 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 ETNPPLQ8TBG4 499 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 DHX58Q96C10 678 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 FAM20AQ96MK3 541 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 BTBD7Q9P203 1132 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 CCDC39Q9UFE4 941 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 SERTAD1Q9UHV2 236 aa20.95■□□□□ 0.94
PRKCA-203ENST00000578063 COPB2P35606 906 aa20.94■□□□□ 0.94
PRKCA-203ENST00000578063 SETQ01105 290 aaPredicted RBP20.94■□□□□ 0.94
PRKCA-203ENST00000578063 TYRO3Q06418 890 aa20.94■□□□□ 0.94
PRKCA-203ENST00000578063 L1TD1Q5T7N2 865 aaKnown RBP20.94■□□□□ 0.94
PRKCA-203ENST00000578063 SPRYD7Q5W111 196 aa20.94■□□□□ 0.94
PRKCA-203ENST00000578063 POTEEQ6S8J3 1075 aa20.94■□□□□ 0.94
PRKCA-203ENST00000578063 MS4A4AQ96JQ5 239 aa20.94■□□□□ 0.94
PRKCA-203ENST00000578063 PANK2Q9BZ23 570 aa20.94■□□□□ 0.94
PRKCA-203ENST00000578063 SPATC1LQ9H0A9 340 aa20.94■□□□□ 0.94
PRKCA-203ENST00000578063 DISC1Q9NRI5 854 aa20.94■□□□□ 0.94
PRKCA-203ENST00000578063 KIAA1468Q9P260 1216 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms