RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 ANO2Q9NQ90 1003 aa18.71■□□□□ 0.59
VAPA-204ENST00000577901 FRMPD2Q68DX3 1309 aaPredicted RBP18.71■□□□□ 0.59
VAPA-204ENST00000577901 NFIBO00712 420 aa18.7■□□□□ 0.58
VAPA-204ENST00000577901 ADGRE1Q14246 886 aa18.7■□□□□ 0.58
VAPA-204ENST00000577901 RALYLQ86SE5 291 aaKnown RBP18.7■□□□□ 0.58
VAPA-204ENST00000577901 RPUSD2Q8IZ73 545 aaKnown RBP18.7■□□□□ 0.58
VAPA-204ENST00000577901 WDR11Q9BZH6 1224 aa18.7■□□□□ 0.58
VAPA-204ENST00000577901 LSG1Q9H089 658 aaKnown RBP18.7■□□□□ 0.58
VAPA-204ENST00000577901 ALDH8A1Q9H2A2 487 aaPredicted RBP18.7■□□□□ 0.58
VAPA-204ENST00000577901 SLC28A3Q9HAS3 691 aa18.7■□□□□ 0.58
VAPA-204ENST00000577901 GPCPD1Q9NPB8 672 aa18.7■□□□□ 0.58
VAPA-204ENST00000577901 POLR3EQ9NVU0 708 aa18.7■□□□□ 0.58
VAPA-204ENST00000577901 YBX2Q9Y2T7 364 aaKnown RBP18.7■□□□□ 0.58
VAPA-204ENST00000577901 LCTP09848 1927 aa18.69■□□□□ 0.58
VAPA-204ENST00000577901 LOC102724159A0A0B4J2E5 919 aa18.69■□□□□ 0.58
VAPA-204ENST00000577901 PTPDC1A2A3K4 754 aa18.69■□□□□ 0.58
VAPA-204ENST00000577901 E7EWF7 191 aa18.69■□□□□ 0.58
VAPA-204ENST00000577901 PWP2Q15269 919 aaKnown RBP18.69■□□□□ 0.58
VAPA-204ENST00000577901 NCOA7Q8NI08 942 aa18.69■□□□□ 0.58
VAPA-204ENST00000577901 ANKS1AQ92625 1134 aa18.69■□□□□ 0.58
VAPA-204ENST00000577901 KAT14Q9H8E8 782 aa18.69■□□□□ 0.58
VAPA-204ENST00000577901 CHD7Q9P2D1 2997 aa18.69■□□□□ 0.58
VAPA-204ENST00000577901 RBM47A0AV96 593 aaKnown RBP18.68■□□□□ 0.58
VAPA-204ENST00000577901 IGFBP4P22692 258 aa18.68■□□□□ 0.58
VAPA-204ENST00000577901 CALML3P27482 149 aa18.68■□□□□ 0.58
VAPA-204ENST00000577901 CPT1AP50416 773 aa18.68■□□□□ 0.58
VAPA-204ENST00000577901 SLC30A10Q6XR72 485 aa18.68■□□□□ 0.58
VAPA-204ENST00000577901 OR6J1Q8NGC5 347 aa18.68■□□□□ 0.58
VAPA-204ENST00000577901 ATXN2LQ8WWM7 1075 aaKnown RBP18.68■□□□□ 0.58
VAPA-204ENST00000577901 CLEC4DQ8WXI8 215 aa18.68■□□□□ 0.58
VAPA-204ENST00000577901 SCLYQ96I15 445 aa18.68■□□□□ 0.58
VAPA-204ENST00000577901 TRMT13Q9NUP7 481 aaKnown RBP18.68■□□□□ 0.58
VAPA-204ENST00000577901 SLC4A7Q9Y6M7 1214 aa18.68■□□□□ 0.58
VAPA-204ENST00000577901 TNKSO95271 1327 aa18.68■□□□□ 0.58
VAPA-204ENST00000577901 TNFRSF10AO00220 468 aa18.67■□□□□ 0.58
VAPA-204ENST00000577901 MYL3P08590 195 aa18.67■□□□□ 0.58
VAPA-204ENST00000577901 SUPT20HL2P0C7V6 817 aa18.67■□□□□ 0.58
VAPA-204ENST00000577901 PDHBP11177 359 aa18.67■□□□□ 0.58
VAPA-204ENST00000577901 RABGGTBP53611 331 aa18.67■□□□□ 0.58
VAPA-204ENST00000577901 PURAQ00577 322 aaKnown RBP18.67■□□□□ 0.58
VAPA-204ENST00000577901 CCDC85BQ15834 202 aaPredicted RBP18.67■□□□□ 0.58
VAPA-204ENST00000577901 RNF207Q6ZRF8 634 aa18.67■□□□□ 0.58
VAPA-204ENST00000577901 ENAHQ8N8S7 591 aaPredicted RBP18.67■□□□□ 0.58
VAPA-204ENST00000577901 VWCEQ96DN2 955 aa18.67■□□□□ 0.58
VAPA-204ENST00000577901 GPHNQ9NQX3 736 aaPredicted RBP18.67■□□□□ 0.58
VAPA-204ENST00000577901 THEGQ9P2T0 379 aa18.67■□□□□ 0.58
VAPA-204ENST00000577901 XIRP2A4UGR9 3374 aa18.66■□□□□ 0.58
VAPA-204ENST00000577901 ERICH2A1L162 156 aa18.66■□□□□ 0.58
VAPA-204ENST00000577901 ZBBXA8MT70 800 aa18.66■□□□□ 0.58
VAPA-204ENST00000577901 CYP2C9P11712 490 aa18.66■□□□□ 0.58
VAPA-204ENST00000577901 PDE4DQ08499 809 aa18.66■□□□□ 0.58
VAPA-204ENST00000577901 SART3Q15020 963 aaKnown RBP18.66■□□□□ 0.58
VAPA-204ENST00000577901 NECTIN1Q15223 517 aa18.66■□□□□ 0.58
VAPA-204ENST00000577901 IFIT1BQ5T764 474 aaKnown RBP18.66■□□□□ 0.58
VAPA-204ENST00000577901 RNF20Q5VTR2 975 aa18.66■□□□□ 0.58
VAPA-204ENST00000577901 PNMA1Q8ND90 353 aa18.66■□□□□ 0.58
VAPA-204ENST00000577901 ASB2Q96Q27 587 aa18.66■□□□□ 0.58
VAPA-204ENST00000577901 MPHOSPH6Q99547 160 aaKnown RBP18.66■□□□□ 0.58
VAPA-204ENST00000577901 MTG1Q9BT17 334 aaPredicted RBP18.66■□□□□ 0.58
VAPA-204ENST00000577901 PNMA2Q9UL42 364 aa18.66■□□□□ 0.58
VAPA-204ENST00000577901 SLC27A2O14975 620 aa18.65■□□□□ 0.58
VAPA-204ENST00000577901 PFKMP08237 780 aa18.65■□□□□ 0.58
VAPA-204ENST00000577901 RPS6P62753 249 aaKnown RBP18.65■□□□□ 0.58
VAPA-204ENST00000577901 ZNF543Q08ER8 600 aa18.65■□□□□ 0.58
VAPA-204ENST00000577901 BRDTQ58F21 947 aaPredicted RBP18.65■□□□□ 0.58
VAPA-204ENST00000577901 GPATCH4Q5T3I0 446 aaKnown RBP18.65■□□□□ 0.58
VAPA-204ENST00000577901 PPP2R2DQ66LE6 453 aa18.65■□□□□ 0.58
VAPA-204ENST00000577901 CREB3L3Q68CJ9 461 aa18.65■□□□□ 0.58
VAPA-204ENST00000577901 CYB5R4Q7L1T6 521 aa18.65■□□□□ 0.58
VAPA-204ENST00000577901 PCDHA11Q9Y5I1 949 aa18.65■□□□□ 0.58
VAPA-204ENST00000577901 IFIT3O14879 490 aaKnown RBP18.64■□□□□ 0.57
VAPA-204ENST00000577901 SNHG28P0DPA3 235 aa18.64■□□□□ 0.57
VAPA-204ENST00000577901 MYOGP15173 224 aa18.64■□□□□ 0.57
VAPA-204ENST00000577901 ATP2A2P16615 1042 aaKnown RBP18.64■□□□□ 0.57
VAPA-204ENST00000577901 TTLL4Q14679 1199 aa18.64■□□□□ 0.57
VAPA-204ENST00000577901 PPP2R5BQ15173 497 aa18.64■□□□□ 0.57
VAPA-204ENST00000577901 FAM47CQ5HY64 1035 aa18.64■□□□□ 0.57
VAPA-204ENST00000577901 TAF6LQ9Y6J9 622 aa18.64■□□□□ 0.57
VAPA-204ENST00000577901 WDR19Q8NEZ3 1342 aa18.64■□□□□ 0.57
VAPA-204ENST00000577901 REV3LO60673 3130 aa18.64■□□□□ 0.57
VAPA-204ENST00000577901 GBF1Q92538 1859 aa18.63■□□□□ 0.57
VAPA-204ENST00000577901 NKRFO15226 690 aaKnown RBP eCLIP18.63■□□□□ 0.572e-10■■■□□ 15.3
VAPA-204ENST00000577901 KPNA6O60684 536 aa18.63■□□□□ 0.57
VAPA-204ENST00000577901 EDNRBP24530 442 aa18.63■□□□□ 0.57
VAPA-204ENST00000577901 MRPS5P82675 430 aaKnown RBP18.63■□□□□ 0.57
VAPA-204ENST00000577901 SEC23AQ15436 765 aa18.63■□□□□ 0.57
VAPA-204ENST00000577901 NBPF20Q3BBV1 942 aa18.63■□□□□ 0.57
VAPA-204ENST00000577901 STOX1Q6ZVD7 989 aa18.63■□□□□ 0.57
VAPA-204ENST00000577901 DEFB128Q7Z7B8 93 aa18.63■□□□□ 0.57
VAPA-204ENST00000577901 DNERQ8NFT8 737 aa18.63■□□□□ 0.57
VAPA-204ENST00000577901 SCFD2Q8WU76 684 aa18.63■□□□□ 0.57
VAPA-204ENST00000577901 TTC28Q96AY4 2481 aa18.62■□□□□ 0.57
VAPA-204ENST00000577901 A6NJR5 290 aa18.62■□□□□ 0.57
VAPA-204ENST00000577901 WTAPQ15007 396 aa18.62■□□□□ 0.57
VAPA-204ENST00000577901 ASPRV1Q53RT3 343 aa18.62■□□□□ 0.57
VAPA-204ENST00000577901 NFRKBQ6P4R8 1299 aa18.62■□□□□ 0.57
VAPA-204ENST00000577901 CHST3Q7LGC8 479 aa18.62■□□□□ 0.57
VAPA-204ENST00000577901 PPP1R13LQ8WUF5 828 aa18.62■□□□□ 0.57
VAPA-204ENST00000577901 COPS5Q92905 334 aa18.62■□□□□ 0.57
VAPA-204ENST00000577901 B4DLN1 442 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms