RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 CARMIL2Q6F5E8 1435 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 MARK3P27448 753 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 ZNF827Q17R98 1081 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 OGFOD1Q8N543 542 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 PBKQ96KB5 322 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 MRGBPQ9NV56 204 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 UBN2Q6ZU65 1347 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 VWA3AA6NCI4 1184 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 EEF1B2P24534 225 aaKnown RBP4.8□□□□□ -1.64
CDH8-205ENST00000577730 ADCY8P40145 1251 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 COPS2P61201 443 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 TRIM60Q495X7 471 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 AGBL2Q5U5Z8 902 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 KRT40Q6A162 431 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 CNNM4Q6P4Q7 775 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 TMTC2Q8N394 836 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 DDI1Q8WTU0 396 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 CEP19Q96LK0 163 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 NDNQ99608 321 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 WARS2Q9UGM6 360 aaKnown RBP4.8□□□□□ -1.64
CDH8-205ENST00000577730 RCOR1Q9UKL0 485 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 TMCO1Q9UM00 188 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.8□□□□□ -1.64
CDH8-205ENST00000577730 H7C1D1 291 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 MAFGO15525 162 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 CCDC22O60826 627 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 STX3Q13277 289 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 TMED2Q15363 201 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 MCM10Q7L590 875 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 NLRP9Q7RTR0 991 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 KIF2BQ8N4N8 673 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 ANKRD13CQ8N6S4 541 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 SDCCAG3Q96C92 435 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 CNNM1Q9NRU3 951 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 ZNF446Q9NWS9 450 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 LRWD1Q9UFC0 647 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 KIF24Q5T7B8 1368 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 CCDC188H7C350 402 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 SRGAP2O75044 1071 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 MOCS3O95396 460 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 OATP04181 439 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 CAPN1P07384 714 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 PYGBP11216 843 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 GRIN1Q05586 938 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 ITIH4Q14624 930 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 WTAPQ15007 396 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 FAM47EQ6ZV65 393 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 TGS1Q96RS0 853 aaKnown RBP4.8□□□□□ -1.64
CDH8-205ENST00000577730 CUEDC2Q9H467 287 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 TEKT2Q9UIF3 430 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 PCDHA5Q9Y5H7 936 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.8□□□□□ -1.64
CDH8-205ENST00000577730 ABLIM1O14639 778 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 BACH1O14867 736 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 DTNBO60941 627 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 VAMP4O75379 141 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 TUBA1BP68363 451 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 RSBN1LQ6PCB5 846 aaPredicted RBP4.8□□□□□ -1.64
CDH8-205ENST00000577730 TUBA1AQ71U36 451 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 ZSWIM6Q9HCJ5 1215 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 DIABLOQ9NR28 239 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 TRAF5O00463 557 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 ATF2P15336 505 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 GSTT1P30711 240 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 DDIT3P35638 169 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 DSG1Q02413 1049 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 WDR93Q6P2C0 686 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 TRAF7Q6Q0C0 670 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 RSPH3Q86UC2 560 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 HORMAD1Q86X24 394 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 RBM12BQ8IXT5 1001 aaKnown RBP4.8□□□□□ -1.64
CDH8-205ENST00000577730 PIGOQ8TEQ8 1089 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 PPWD1Q96BP3 646 aaKnown RBP4.8□□□□□ -1.64
CDH8-205ENST00000577730 GALNT8Q9NY28 637 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 ZMYND8Q9ULU4 1186 aaPredicted RBP4.8□□□□□ -1.64
CDH8-205ENST00000577730 PIK3R4Q99570 1358 aa4.8□□□□□ -1.64
CDH8-205ENST00000577730 GRID2IPA4D2P6 1211 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 KRT38O76015 456 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 DDHD2O94830 711 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 KCNA2P16389 499 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 MAP4P27816 1152 aaKnown RBP4.79□□□□□ -1.64
CDH8-205ENST00000577730 KRT76Q01546 638 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 USP37Q86T82 979 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 CCDC89Q8N998 374 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 NMD3Q96D46 503 aaKnown RBP4.79□□□□□ -1.64
CDH8-205ENST00000577730 PNKPQ96T60 521 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 FMO2Q99518 471 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 FHDC1Q9C0D6 1143 aaPredicted RBP4.79□□□□□ -1.64
CDH8-205ENST00000577730 PRELID1Q9Y255 219 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 POTEFA5A3E0 1075 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 SPDYE3A6NKU9 549 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 ATP9AO75110 1047 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 HSPA6P17066 643 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 SERPINB10P48595 397 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 RASSF7Q02833 373 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 BYSLQ13895 437 aaKnown RBP4.79□□□□□ -1.64
CDH8-205ENST00000577730 NDUFA5Q16718 116 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 RARS2Q5T160 578 aaKnown RBP4.79□□□□□ -1.64
CDH8-205ENST00000577730 MFSD6Q6ZSS7 791 aa4.79□□□□□ -1.64
CDH8-205ENST00000577730 GPIHBP1Q8IV16 184 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms