RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 NOP56O00567 594 aaKnown RBP7.94□□□□□ -1.14
SMCHD1-202ENST00000577300 SCRN1Q12765 414 aa7.94□□□□□ -1.14
SMCHD1-202ENST00000577300 ERICH6BQ5W0A0 696 aa7.94□□□□□ -1.14
SMCHD1-202ENST00000577300 TRIM59Q8IWR1 403 aa7.94□□□□□ -1.14
SMCHD1-202ENST00000577300 USP33Q8TEY7 942 aa7.94□□□□□ -1.14
SMCHD1-202ENST00000577300 CYP26B1Q9NR63 512 aa7.94□□□□□ -1.14
SMCHD1-202ENST00000577300 CLEC1BQ9P126 229 aa7.94□□□□□ -1.14
SMCHD1-202ENST00000577300 PLS3P13797 630 aa7.93□□□□□ -1.14
SMCHD1-202ENST00000577300 DLX2Q07687 328 aaPredicted RBP7.93□□□□□ -1.14
SMCHD1-202ENST00000577300 MRGPRX3Q96LB0 322 aa7.93□□□□□ -1.14
SMCHD1-202ENST00000577300 BCAS3Q9H6U6 928 aa7.93□□□□□ -1.14
SMCHD1-202ENST00000577300 CACNB2Q08289 660 aaPredicted RBP7.92□□□□□ -1.14
SMCHD1-202ENST00000577300 SKOR2Q2VWA4 1001 aaPredicted RBP7.92□□□□□ -1.14
SMCHD1-202ENST00000577300 MBLAC2Q68D91 279 aa7.92□□□□□ -1.14
SMCHD1-202ENST00000577300 GTF2IRD2BQ6EKJ0 949 aa7.92□□□□□ -1.14
SMCHD1-202ENST00000577300 GTF2IRD2Q86UP8 949 aa7.92□□□□□ -1.14
SMCHD1-202ENST00000577300 PLEKHO2Q8TD55 490 aa7.92□□□□□ -1.14
SMCHD1-202ENST00000577300 ZNF526Q8TF50 670 aaPredicted RBP7.92□□□□□ -1.14
SMCHD1-202ENST00000577300 ADAM7Q9H2U9 754 aa7.92□□□□□ -1.14
SMCHD1-202ENST00000577300 NKX2-4Q9H2Z4 354 aa7.92□□□□□ -1.14
SMCHD1-202ENST00000577300 GPRC5CQ9NQ84 441 aa7.92□□□□□ -1.14
SMCHD1-202ENST00000577300 FUCA1P04066 466 aa7.91□□□□□ -1.14
SMCHD1-202ENST00000577300 NTRK1P04629 796 aa7.91□□□□□ -1.14
SMCHD1-202ENST00000577300 THBDP07204 575 aa7.91□□□□□ -1.14
SMCHD1-202ENST00000577300 CELA3BP08861 270 aa7.91□□□□□ -1.14
SMCHD1-202ENST00000577300 DCP2Q8IU60 420 aaKnown RBP7.91□□□□□ -1.14
SMCHD1-202ENST00000577300 ADGRG2Q8IZP9 1017 aa7.91□□□□□ -1.14
SMCHD1-202ENST00000577300 SMARCC2Q8TAQ2 1214 aa7.91□□□□□ -1.14
SMCHD1-202ENST00000577300 DPF3Q92784 378 aa7.91□□□□□ -1.14
SMCHD1-202ENST00000577300 A0A1B0GTL3 188 aa7.9□□□□□ -1.14
SMCHD1-202ENST00000577300 TNNI3KQ59H18 835 aa7.9□□□□□ -1.14
SMCHD1-202ENST00000577300 ZFYVE27Q5T4F4 411 aa7.9□□□□□ -1.14
SMCHD1-202ENST00000577300 CAPN10Q9HC96 672 aa7.9□□□□□ -1.14
SMCHD1-202ENST00000577300 CYP4F3Q08477 520 aa7.89□□□□□ -1.15
SMCHD1-202ENST00000577300 IQCEQ6IPM2 695 aa7.89□□□□□ -1.15
SMCHD1-202ENST00000577300 CARFQ8N187 725 aa7.89□□□□□ -1.15
SMCHD1-202ENST00000577300 NPLOC4Q8TAT6 608 aa7.89□□□□□ -1.15
SMCHD1-202ENST00000577300 FRS2Q8WU20 508 aa7.89□□□□□ -1.15
SMCHD1-202ENST00000577300 SPATA25Q9BR10 227 aa7.89□□□□□ -1.15
SMCHD1-202ENST00000577300 ACTR10Q9NZ32 417 aa7.89□□□□□ -1.15
SMCHD1-202ENST00000577300 MARCH2Q9P0N8 246 aa7.89□□□□□ -1.15
SMCHD1-202ENST00000577300 SMAD7O15105 426 aaKnown RBP7.88□□□□□ -1.15
SMCHD1-202ENST00000577300 INF2Q27J81 1249 aa7.88□□□□□ -1.15
SMCHD1-202ENST00000577300 E4F1Q66K89 784 aaPredicted RBP7.88□□□□□ -1.15
SMCHD1-202ENST00000577300 C6orf15Q6UXA7 325 aaPredicted RBP7.88□□□□□ -1.15
SMCHD1-202ENST00000577300 VPS37DQ86XT2 251 aa7.88□□□□□ -1.15
SMCHD1-202ENST00000577300 PPP1R14AQ96A00 147 aa7.88□□□□□ -1.15
SMCHD1-202ENST00000577300 NOX5Q96PH1 765 aa7.88□□□□□ -1.15
SMCHD1-202ENST00000577300 SIT1Q9Y3P8 196 aa7.88□□□□□ -1.15
SMCHD1-202ENST00000577300 SLC6A11P48066 632 aa7.87□□□□□ -1.15
SMCHD1-202ENST00000577300 NT5DC1Q5TFE4 455 aa7.87□□□□□ -1.15
SMCHD1-202ENST00000577300 FAM178BQ8IXR5 827 aa7.87□□□□□ -1.15
SMCHD1-202ENST00000577300 LINC00482Q8N8I6 264 aa7.87□□□□□ -1.15
SMCHD1-202ENST00000577300 LGR4Q9BXB1 951 aa7.87□□□□□ -1.15
SMCHD1-202ENST00000577300 AP5M1Q9H0R1 490 aa7.87□□□□□ -1.15
SMCHD1-202ENST00000577300 PCDH18Q9HCL0 1135 aa7.87□□□□□ -1.15
SMCHD1-202ENST00000577300 USP40Q9NVE5 1235 aa7.87□□□□□ -1.15
SMCHD1-202ENST00000577300 SPATA6Q9NWH7 488 aaPredicted RBP7.87□□□□□ -1.15
SMCHD1-202ENST00000577300 SGSM2O43147 1006 aa7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 SCG5P05408 212 aa7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 SSBP05455 408 aaKnown RBP eCLIP7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 CYP2C8P10632 490 aa7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 HOXC12P31275 282 aa7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 RTP5Q14D33 572 aa7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 MIB1Q86YT6 1006 aa7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 RIOX2Q8IUF8 465 aa7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 TEX2Q8IWB9 1127 aa7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 Q8N1Y9 231 aa7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 BTN2A2Q8WVV5 523 aa7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 SEC14L1Q92503 715 aa7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 NTMQ9P121 344 aa7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 PRKAG3Q9UGI9 489 aa7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 TIMM13Q9Y5L4 95 aaPredicted RBP7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 MRVI1Q9Y6F6 885 aa7.86□□□□□ -1.15
SMCHD1-202ENST00000577300 C22orf46C9J442 243 aa7.85□□□□□ -1.15
SMCHD1-202ENST00000577300 PRICKLE3O43900 615 aaPredicted RBP7.85□□□□□ -1.15
SMCHD1-202ENST00000577300 C8BP07358 591 aa7.85□□□□□ -1.15
SMCHD1-202ENST00000577300 ERCC5P28715 1186 aaPredicted RBP7.85□□□□□ -1.15
SMCHD1-202ENST00000577300 GTF2A2P52657 109 aa7.85□□□□□ -1.15
SMCHD1-202ENST00000577300 RPL11P62913 178 aaKnown RBP7.85□□□□□ -1.15
SMCHD1-202ENST00000577300 TESK1Q15569 626 aa7.85□□□□□ -1.15
SMCHD1-202ENST00000577300 MROH9Q5TGP6 573 aa7.85□□□□□ -1.15
SMCHD1-202ENST00000577300 ETV3LQ6ZN32 361 aa7.85□□□□□ -1.15
SMCHD1-202ENST00000577300 PRRT2Q7Z6L0 340 aaPredicted RBP7.85□□□□□ -1.15
SMCHD1-202ENST00000577300 ZNF227Q86WZ6 799 aa7.85□□□□□ -1.15
SMCHD1-202ENST00000577300 ZBTB8AQ96BR9 441 aa7.85□□□□□ -1.15
SMCHD1-202ENST00000577300 DDX11Q96FC9 970 aa7.85□□□□□ -1.15
SMCHD1-202ENST00000577300 SUSD5O60279 629 aa7.84□□□□□ -1.15
SMCHD1-202ENST00000577300 NOBOXO60393 691 aa7.84□□□□□ -1.15
SMCHD1-202ENST00000577300 CPP00450 1065 aa7.84□□□□□ -1.15
SMCHD1-202ENST00000577300 ITGAVP06756 1048 aa7.84□□□□□ -1.15
SMCHD1-202ENST00000577300 SARSP49591 514 aaKnown RBP7.84□□□□□ -1.15
SMCHD1-202ENST00000577300 KCNAB2Q13303 367 aa7.84□□□□□ -1.15
SMCHD1-202ENST00000577300 SV2CQ496J9 727 aa7.84□□□□□ -1.15
SMCHD1-202ENST00000577300 LARP1BQ659C4 914 aaKnown RBP7.84□□□□□ -1.15
SMCHD1-202ENST00000577300 TTLL7Q6ZT98 887 aa7.84□□□□□ -1.15
SMCHD1-202ENST00000577300 DIO2Q92813 273 aa7.84□□□□□ -1.15
SMCHD1-202ENST00000577300 CCDC140Q96MF4 163 aa7.84□□□□□ -1.15
SMCHD1-202ENST00000577300 BTG4Q9NY30 223 aa7.84□□□□□ -1.15
SMCHD1-202ENST00000577300 CNOT11Q9UKZ1 510 aaKnown RBP7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms