RNA–Protein interactions for RNA: ENST00000577288.5

THRA-205, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 4

Gene THRA, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-205ENST00000577288 ALDH8A1Q9H2A2 487 aaPredicted RBP29.39■■■□□ 2.3
THRA-205ENST00000577288 PXMP2Q9NR77 195 aa29.39■■■□□ 2.3
THRA-205ENST00000577288 PDGFCQ9NRA1 345 aa29.39■■■□□ 2.3
THRA-205ENST00000577288 hCG_1984214I3L0E3 225 aa29.38■■■□□ 2.29
THRA-205ENST00000577288 ADAMTS4O75173 837 aa29.38■■■□□ 2.29
THRA-205ENST00000577288 EIF2AK2P19525 551 aaKnown RBP29.38■■■□□ 2.29
THRA-205ENST00000577288 STXBP2Q15833 593 aa29.38■■■□□ 2.29
THRA-205ENST00000577288 ZNF713Q8N859 430 aaPredicted RBP29.38■■■□□ 2.29
THRA-205ENST00000577288 DPF3Q92784 378 aa29.38■■■□□ 2.29
THRA-205ENST00000577288 RBM27Q9P2N5 1060 aaKnown RBP29.38■■■□□ 2.29
THRA-205ENST00000577288 SYNRGQ9UMZ2 1314 aa29.38■■■□□ 2.29
THRA-205ENST00000577288 C11orf97A0A1B0GVM6 126 aaPredicted RBP29.37■■■□□ 2.29
THRA-205ENST00000577288 PIK3CDO00329 1044 aa29.37■■■□□ 2.29
THRA-205ENST00000577288 ADCY6O43306 1168 aa29.37■■■□□ 2.29
THRA-205ENST00000577288 ANKRD1Q15327 319 aa29.37■■■□□ 2.29
THRA-205ENST00000577288 FCHSD1Q86WN1 690 aa29.37■■■□□ 2.29
THRA-205ENST00000577288 SMARCC2Q8TAQ2 1214 aa29.37■■■□□ 2.29
THRA-205ENST00000577288 PSTPIP2Q9H939 334 aa29.37■■■□□ 2.29
THRA-205ENST00000577288 FRMPD3Q5JV73 1810 aa29.36■■■□□ 2.29
THRA-205ENST00000577288 RBM47A0AV96 593 aaKnown RBP29.36■■■□□ 2.29
THRA-205ENST00000577288 NR3C2P08235 984 aa29.36■■■□□ 2.29
THRA-205ENST00000577288 SMPD1P17405 629 aa29.36■■■□□ 2.29
THRA-205ENST00000577288 GJA9P57773 515 aa29.36■■■□□ 2.29
THRA-205ENST00000577288 CCT2P78371 535 aaKnown RBP29.36■■■□□ 2.29
THRA-205ENST00000577288 GPKOWQ92917 476 aaPredicted RBP eCLIP29.36■■■□□ 2.29
THRA-205ENST00000577288 WDR11Q9BZH6 1224 aa29.36■■■□□ 2.29
THRA-205ENST00000577288 SENP6Q9GZR1 1112 aaPredicted RBP29.36■■■□□ 2.29
THRA-205ENST00000577288 UPF3AQ9H1J1 476 aaKnown RBP29.36■■■□□ 2.29
THRA-205ENST00000577288 GNEQ9Y223 722 aaKnown RBP29.36■■■□□ 2.29
THRA-205ENST00000577288 Q9Y3F1 56 aa29.36■■■□□ 2.29
THRA-205ENST00000577288 GTF3C3Q9Y5Q9 886 aa29.36■■■□□ 2.29
THRA-205ENST00000577288 MCM3APO60318 1980 aa29.35■■■□□ 2.29
THRA-205ENST00000577288 WWC2Q6AWC2 1192 aa29.35■■■□□ 2.29
THRA-205ENST00000577288 PPP1R18Q6NYC8 613 aa29.35■■■□□ 2.29
THRA-205ENST00000577288 SCFD2Q8WU76 684 aa29.35■■■□□ 2.29
THRA-205ENST00000577288 PDCD2LQ9BRP1 358 aa29.35■■■□□ 2.29
THRA-205ENST00000577288 TSEN34Q9BSV6 310 aaKnown RBP29.35■■■□□ 2.29
THRA-205ENST00000577288 MEIS2O14770 477 aa29.34■■■□□ 2.29
THRA-205ENST00000577288 EIF3JO75822 258 aaKnown RBP29.34■■■□□ 2.29
THRA-205ENST00000577288 C6orf222P0C671 652 aaPredicted RBP29.34■■■□□ 2.29
THRA-205ENST00000577288 IFNAR1P17181 557 aa29.34■■■□□ 2.29
THRA-205ENST00000577288 CST5P28325 142 aaPredicted RBP29.34■■■□□ 2.29
THRA-205ENST00000577288 AKAP17AQ02040 695 aaKnown RBP29.34■■■□□ 2.29
THRA-205ENST00000577288 DUSP28Q4G0W2 176 aa29.34■■■□□ 2.29
THRA-205ENST00000577288 USP17L6PQ6QN14 398 aa29.34■■■□□ 2.29
THRA-205ENST00000577288 TEX2Q8IWB9 1127 aa29.34■■■□□ 2.29
THRA-205ENST00000577288 KLHDC9Q8NEP7 349 aa29.34■■■□□ 2.29
THRA-205ENST00000577288 LARP6Q9BRS8 491 aaKnown RBP29.34■■■□□ 2.29
THRA-205ENST00000577288 AP5M1Q9H0R1 490 aa29.34■■■□□ 2.29
THRA-205ENST00000577288 PHF24Q9UPV7 400 aa29.34■■■□□ 2.29
THRA-205ENST00000577288 PRPF3O43395 683 aaKnown RBP29.33■■■□□ 2.29
THRA-205ENST00000577288 NAPAP54920 295 aa29.33■■■□□ 2.29
THRA-205ENST00000577288 NKX3-2P78367 333 aa29.33■■■□□ 2.29
THRA-205ENST00000577288 PGM5Q15124 567 aa29.33■■■□□ 2.29
THRA-205ENST00000577288 NTRK3Q16288 839 aa29.33■■■□□ 2.29
THRA-205ENST00000577288 PFKFB3Q16875 520 aaPredicted RBP29.33■■■□□ 2.29
THRA-205ENST00000577288 TLK2Q86UE8 772 aa29.33■■■□□ 2.29
THRA-205ENST00000577288 PCSK9Q8NBP7 692 aaKnown RBP29.33■■■□□ 2.29
THRA-205ENST00000577288 NCOA5Q9HCD5 579 aaKnown RBP29.33■■■□□ 2.29
THRA-205ENST00000577288 BARHL2Q9NY43 387 aa29.33■■■□□ 2.29
THRA-205ENST00000577288 LRRC37A2A6NM11 1700 aa29.32■■■□□ 2.28
THRA-205ENST00000577288 CPLX1O14810 134 aa29.32■■■□□ 2.28
THRA-205ENST00000577288 NKRFO15226 690 aaKnown RBP eCLIP29.32■■■□□ 2.28
THRA-205ENST00000577288 TTLL4Q14679 1199 aa29.32■■■□□ 2.28
THRA-205ENST00000577288 CPLX2Q6PUV4 134 aaKnown RBP29.32■■■□□ 2.28
THRA-205ENST00000577288 VSIG10LQ86VR7 867 aa29.32■■■□□ 2.28
THRA-205ENST00000577288 RNF26Q9BY78 433 aaPredicted RBP29.32■■■□□ 2.28
THRA-205ENST00000577288 MOXD2PA6NHM9 499 aa29.31■■■□□ 2.28
THRA-205ENST00000577288 DYNC1LI2O43237 492 aaPredicted RBP29.31■■■□□ 2.28
THRA-205ENST00000577288 EVI5O60447 810 aa29.31■■■□□ 2.28
THRA-205ENST00000577288 MYCLP12524 364 aaPredicted RBP29.31■■■□□ 2.28
THRA-205ENST00000577288 SCG2P13521 617 aa29.31■■■□□ 2.28
THRA-205ENST00000577288 NEK4P51957 841 aa29.31■■■□□ 2.28
THRA-205ENST00000577288 AK2P54819 239 aa29.31■■■□□ 2.28
THRA-205ENST00000577288 GNASQ5JWF2 1037 aa29.31■■■□□ 2.28
THRA-205ENST00000577288 PHKBQ93100 1093 aa29.31■■■□□ 2.28
THRA-205ENST00000577288 NR2E3Q9Y5X4 410 aa29.31■■■□□ 2.28
THRA-205ENST00000577288 STXBP3O00186 592 aa29.3■■■□□ 2.28
THRA-205ENST00000577288 TXNP10599 105 aaKnown RBP29.3■■■□□ 2.28
THRA-205ENST00000577288 CCND2P30279 289 aa29.3■■■□□ 2.28
THRA-205ENST00000577288 STK3Q13188 491 aa29.3■■■□□ 2.28
THRA-205ENST00000577288 KCNA10Q16322 511 aa29.3■■■□□ 2.28
THRA-205ENST00000577288 CCSAPQ6IQ19 270 aaPredicted RBP29.3■■■□□ 2.28
THRA-205ENST00000577288 SEPT14Q6ZU15 432 aa29.3■■■□□ 2.28
THRA-205ENST00000577288 C22orf23Q9BZE7 217 aa29.3■■■□□ 2.28
THRA-205ENST00000577288 GLT8D2Q9H1C3 349 aa29.3■■■□□ 2.28
THRA-205ENST00000577288 FRMPD4Q14CM0 1322 aa29.29■■■□□ 2.28
THRA-205ENST00000577288 MYADML2A6NDP7 307 aa29.29■■■□□ 2.28
THRA-205ENST00000577288 ACLYP53396 1101 aa29.29■■■□□ 2.28
THRA-205ENST00000577288 TMEM63BQ5T3F8 832 aa29.29■■■□□ 2.28
THRA-205ENST00000577288 TYW1BQ6NUM6 668 aa29.29■■■□□ 2.28
THRA-205ENST00000577288 TRIM22Q8IYM9 498 aa29.29■■■□□ 2.28
THRA-205ENST00000577288 FERMT2Q96AC1 680 aa29.29■■■□□ 2.28
THRA-205ENST00000577288 SLC26A6Q9BXS9 759 aa29.29■■■□□ 2.28
THRA-205ENST00000577288 SLKQ9H2G2 1235 aaPredicted RBP29.29■■■□□ 2.28
THRA-205ENST00000577288 UPF2Q9HAU5 1272 aaKnown RBP29.29■■■□□ 2.28
THRA-205ENST00000577288 RIC8AQ9NPQ8 531 aa29.29■■■□□ 2.28
THRA-205ENST00000577288 TPCN1Q9ULQ1 816 aa29.29■■■□□ 2.28
THRA-205ENST00000577288 CTAGE5O15320 804 aa29.28■■■□□ 2.28
THRA-205ENST00000577288 FSCN1Q16658 493 aaKnown RBP29.28■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms