RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 MAEAQ7L5Y9 396 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 SH2D3AQ9BRG2 576 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 PKD2L1Q9P0L9 805 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 ZEB2O60315 1214 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 SLC1A4P43007 532 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 RAPGEF1Q13905 1077 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 KSR1Q8IVT5 923 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 SPICE1Q8N0Z3 855 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 ELMO3Q96BJ8 720 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 PACSIN1Q9BY11 444 aa16.48■□□□□ 0.23
PRPF8-216ENST00000577001 SPATA31A1Q5TZJ5 1347 aa16.47■□□□□ 0.23
PRPF8-216ENST00000577001 RBAK-RBAKDNI3L0D1 243 aa16.47■□□□□ 0.23
PRPF8-216ENST00000577001 REXO1Q8N1G1 1221 aaKnown RBP16.47■□□□□ 0.23
PRPF8-216ENST00000577001 RPGRQ92834 1020 aaKnown RBP16.47■□□□□ 0.23
PRPF8-216ENST00000577001 ARHGAP20Q9P2F6 1191 aa16.47■□□□□ 0.23
PRPF8-216ENST00000577001 MYH14Q7Z406 1995 aaKnown RBP16.47■□□□□ 0.23
PRPF8-216ENST00000577001 PLEKHG2Q9H7P9 1386 aa16.47■□□□□ 0.23
PRPF8-216ENST00000577001 KRT86O43790 486 aa16.47■□□□□ 0.23
PRPF8-216ENST00000577001 POLR2FP61218 127 aaKnown RBP16.47■□□□□ 0.23
PRPF8-216ENST00000577001 SPAG1Q07617 926 aa16.47■□□□□ 0.23
PRPF8-216ENST00000577001 NEK8Q86SG6 692 aa16.47■□□□□ 0.23
PRPF8-216ENST00000577001 GOLGA6L1Q8N7Z2 621 aa16.47■□□□□ 0.23
PRPF8-216ENST00000577001 CALML4Q96GE6 196 aa16.47■□□□□ 0.23
PRPF8-216ENST00000577001 MMTAG2Q9BU76 263 aaKnown RBP16.47■□□□□ 0.23
PRPF8-216ENST00000577001 BARHL2Q9NY43 387 aa16.47■□□□□ 0.23
PRPF8-216ENST00000577001 CHORDC1Q9UHD1 332 aaPredicted RBP16.47■□□□□ 0.23
PRPF8-216ENST00000577001 CICQ96RK0 1608 aaPredicted RBP16.47■□□□□ 0.23
PRPF8-216ENST00000577001 BRD3Q15059 726 aa16.46■□□□□ 0.23
PRPF8-216ENST00000577001 NAA35Q5VZE5 725 aa16.46■□□□□ 0.23
PRPF8-216ENST00000577001 DDX12PQ92771 950 aa16.46■□□□□ 0.23
PRPF8-216ENST00000577001 SECISBP2LQ93073 1101 aaKnown RBP16.46■□□□□ 0.23
PRPF8-216ENST00000577001 NAA15Q9BXJ9 866 aaKnown RBP16.46■□□□□ 0.23
PRPF8-216ENST00000577001 USP17L10C9JJH3 530 aa16.46■□□□□ 0.23
PRPF8-216ENST00000577001 G3V3G9 751 aa16.46■□□□□ 0.23
PRPF8-216ENST00000577001 BMP15O95972 392 aa16.46■□□□□ 0.23
PRPF8-216ENST00000577001 MAGEA1P43355 309 aa16.46■□□□□ 0.23
PRPF8-216ENST00000577001 SF3B3Q15393 1217 aaKnown RBP16.46■□□□□ 0.23
PRPF8-216ENST00000577001 DCAF8Q5TAQ9 597 aa16.46■□□□□ 0.23
PRPF8-216ENST00000577001 MYH6P13533 1939 aa16.46■□□□□ 0.22
PRPF8-216ENST00000577001 BAG3O95817 575 aa16.46■□□□□ 0.22
PRPF8-216ENST00000577001 SV2BQ7L1I2 683 aa16.46■□□□□ 0.22
PRPF8-216ENST00000577001 ZFPM1Q8IX07 1006 aa16.46■□□□□ 0.22
PRPF8-216ENST00000577001 SMARCC1Q92922 1105 aaPredicted RBP16.46■□□□□ 0.22
PRPF8-216ENST00000577001 KIAA1024Q9UPX6 916 aa16.46■□□□□ 0.22
PRPF8-216ENST00000577001 CHMP2AO43633 222 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 ORC4O43929 436 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 CYLC1P35663 651 aaPredicted RBP16.45■□□□□ 0.22
PRPF8-216ENST00000577001 EHHADHQ08426 723 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 CNBD1Q8NA66 436 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 TRIM31Q9BZY9 425 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 C6orf50Q9HD87 102 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 POTEB3A0JP26 581 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 POTECB2RU33 542 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 KIF11P52732 1056 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 AMPD2Q01433 879 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 GRM4Q14833 912 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 ZYXQ15942 572 aaKnown RBP16.45■□□□□ 0.22
PRPF8-216ENST00000577001 DCAF17Q5H9S7 520 aaPredicted RBP16.45■□□□□ 0.22
PRPF8-216ENST00000577001 TMED8Q6PL24 325 aaPredicted RBP16.45■□□□□ 0.22
PRPF8-216ENST00000577001 POTEBQ6S5H4 581 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 TXLNBQ8N3L3 684 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 RDH13Q8NBN7 331 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 GIMAP8Q8ND71 665 aaPredicted RBP16.45■□□□□ 0.22
PRPF8-216ENST00000577001 ADAMTS1Q9UHI8 967 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 LAMB4A4D0S4 1761 aa16.45■□□□□ 0.22
PRPF8-216ENST00000577001 MYO1CO00159 1063 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 CLIC2O15247 247 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 EIF3JO75822 258 aaKnown RBP16.44■□□□□ 0.22
PRPF8-216ENST00000577001 NOP2P46087 812 aaKnown RBP16.44■□□□□ 0.22
PRPF8-216ENST00000577001 GRB10Q13322 594 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 MIIPQ5JXC2 388 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 GJB7Q6PEY0 223 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 FAM133AQ8N9E0 248 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 ZNF507Q8TCN5 953 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 SELENOOQ9BVL4 669 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 NDST4Q9H3R1 872 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 CCNE1P24864 410 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 DNM2P50570 870 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 HERC4Q5GLZ8 1057 aaPredicted RBP16.44■□□□□ 0.22
PRPF8-216ENST00000577001 MSL1Q68DK7 614 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 CCDC47Q96A33 483 aaKnown RBP16.44■□□□□ 0.22
PRPF8-216ENST00000577001 BCCIPQ9P287 314 aaKnown RBP eCLIP16.44■□□□□ 0.22
PRPF8-216ENST00000577001 CAPN11Q9UMQ6 739 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 PCDHA13Q9Y5I0 950 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 ABCA3Q99758 1704 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 TUBB4AP04350 444 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 HOXA13P31271 388 aaPredicted RBP16.44■□□□□ 0.22
PRPF8-216ENST00000577001 ZNF622Q969S3 477 aaKnown RBP eCLIP16.44■□□□□ 0.226e-7■□□□□ 9.1
PRPF8-216ENST00000577001 MTMR8Q96EF0 704 aa16.44■□□□□ 0.22
PRPF8-216ENST00000577001 LSM14BQ9BX40 385 aaKnown RBP16.44■□□□□ 0.22
PRPF8-216ENST00000577001 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.44■□□□□ 0.22
PRPF8-216ENST00000577001 ECM29Q5VYK3 1845 aa16.43■□□□□ 0.22
PRPF8-216ENST00000577001 MAP2K7O14733 419 aa16.43■□□□□ 0.22
PRPF8-216ENST00000577001 GDF11O95390 407 aa16.43■□□□□ 0.22
PRPF8-216ENST00000577001 USP14P54578 494 aa16.43■□□□□ 0.22
PRPF8-216ENST00000577001 PABPC4Q13310 644 aaKnown RBP eCLIP16.43■□□□□ 0.22
PRPF8-216ENST00000577001 TRAPPC11Q7Z392 1133 aa16.43■□□□□ 0.22
PRPF8-216ENST00000577001 DDX42Q86XP3 938 aaKnown RBP eCLIP16.43■□□□□ 0.22
PRPF8-216ENST00000577001 SEPT11Q9NVA2 429 aaKnown RBP16.43■□□□□ 0.22
PRPF8-216ENST00000577001 KBTBD4Q9NVX7 518 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms