RNA–Protein interactions for RNA: ENST00000576523.1

NCBP3-206, Transcript of nuclear cap binding subunit 3, human

TSL 2

Gene NCBP3, Length 249 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCBP3-206	ENST00000576523	SLC4A3	P48751	1232 aa		10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	GNAQ	P50148	359 aa		10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	FCGRT	P55899	365 aa		10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	WWC2	Q6AWC2	1192 aa		10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	SYNE3	Q6ZMZ3	975 aa		10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	FBXO11	Q86XK2	927 aa		10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	SPIRE2	Q8WWL2	714 aa		10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	TRERF1	Q96PN7	1200 aa		10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	PURB	Q96QR8	312 aa	Known RBP	10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	LZTS2	Q9BRK4	669 aa		10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	MROH8	Q9H579	483 aa		10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	A1CF	Q9NQ94	594 aa	Known RBP	10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	FLRT1	Q9NZU1	646 aa		10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	SRRD	Q9UH36	339 aa		10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	TRIM17	Q9Y577	477 aa		10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	MAFB	Q9Y5Q3	323 aa	Predicted RBP	10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	PTCH2	Q9Y6C5	1203 aa		10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	DDX49	Q9Y6V7	483 aa	Known RBP	10.1	□□□□□ -0.79
NCBP3-206	ENST00000576523	KAT6A	Q92794	2004 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	C2orf72	A6NCS6	295 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	SLC15A5	A6NIM6	579 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	PRPF3	O43395	683 aa	Known RBP	10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	FMNL1	O95466	1100 aa	Predicted RBP	10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	PGK2	P07205	417 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	ADORA2A	P29274	412 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	FLT3LG	P49771	235 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	CCNA1	P78396	465 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	GHRHR	Q02643	423 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	PPP2R5B	Q15173	497 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	ANKRD1	Q15327	319 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	CCL14	Q16627	93 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	TKFC	Q3LXA3	575 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	WDR78	Q5VTH9	848 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	SLC30A10	Q6XR72	485 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	CTU1	Q7Z7A3	348 aa	Known RBP	10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	NSUN7	Q8NE18	718 aa	Known RBP	10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	CHST13	Q8NET6	341 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	AIFM3	Q96NN9	605 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	SLK	Q9H2G2	1235 aa	Predicted RBP	10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	ACAD9	Q9H845	621 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	COL20A1	Q9P218	1284 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	LIMCH1	Q9UPQ0	1083 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	PTPN22	Q9Y2R2	807 aa		10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523		V9GY48	417 aa	Predicted RBP	10.09	□□□□□ -0.79
NCBP3-206	ENST00000576523	ABCB11	O95342	1321 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	SOWAHB	A6NEL2	793 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	STXBP3	O00186	592 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	EVI5	O60447	810 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	JAK2	O60674	1132 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	HOXC6	P09630	235 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	CNTN2	Q02246	1040 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	TRIM32	Q13049	653 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	ZNF792	Q3KQV3	632 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	CCDC83	Q8IWF9	413 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	FAM133A	Q8N9E0	248 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	TRIB2	Q92519	343 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	RRP36	Q96EU6	259 aa	Known RBP	10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	TMX3	Q96JJ7	454 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	MMP19	Q99542	508 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	AMN	Q9BXJ7	453 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	RNF26	Q9BY78	433 aa	Predicted RBP	10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	CYP39A1	Q9NYL5	469 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	TFIP11	Q9UBB9	837 aa	Known RBP	10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	PCDHA1	Q9Y5I3	950 aa		10.08	□□□□□ -0.8
NCBP3-206	ENST00000576523	CCDC196	A0A1B0GTZ2	297 aa		10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	GNRH1	P01148	92 aa		10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	ELN	P15502	786 aa		10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	CYP2B6	P20813	491 aa		10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	COPB2	P35606	906 aa		10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	RPS6	P62753	249 aa	Known RBP	10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	BAAT	Q14032	418 aa	Predicted RBP	10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	KIF22	Q14807	665 aa		10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	NPY5R	Q15761	445 aa		10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	PFKFB3	Q16875	520 aa	Predicted RBP	10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	PRPF38B	Q5VTL8	546 aa	Known RBP	10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	ABRA	Q8N0Z2	381 aa		10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	SMARCC2	Q8TAQ2	1214 aa		10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	NUDT12	Q9BQG2	462 aa		10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	SLC26A6	Q9BXS9	759 aa		10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	MCOLN1	Q9GZU1	580 aa		10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	GJB4	Q9NTQ9	266 aa		10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	RBM27	Q9P2N5	1060 aa	Known RBP	10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	STK36	Q9NRP7	1315 aa		10.07	□□□□□ -0.8
NCBP3-206	ENST00000576523	LOXHD1	Q8IVV2	1947 aa		10.06	□□□□□ -0.8
NCBP3-206	ENST00000576523	MEIS2	O14770	477 aa		10.06	□□□□□ -0.8
NCBP3-206	ENST00000576523	STRN	O43815	780 aa		10.06	□□□□□ -0.8
NCBP3-206	ENST00000576523	ST18	O60284	1047 aa		10.06	□□□□□ -0.8
NCBP3-206	ENST00000576523	AP1G2	O75843	785 aa		10.06	□□□□□ -0.8
NCBP3-206	ENST00000576523	FCER1A	P12319	257 aa		10.06	□□□□□ -0.8
NCBP3-206	ENST00000576523	SCG2	P13521	617 aa		10.06	□□□□□ -0.8
NCBP3-206	ENST00000576523	HSD17B4	P51659	736 aa		10.06	□□□□□ -0.8
NCBP3-206	ENST00000576523	PHLDB3	Q6NSJ2	640 aa		10.06	□□□□□ -0.8
NCBP3-206	ENST00000576523	NSMF	Q6X4W1	530 aa		10.06	□□□□□ -0.8
NCBP3-206	ENST00000576523	SYTL5	Q8TDW5	730 aa	Predicted RBP	10.06	□□□□□ -0.8
NCBP3-206	ENST00000576523	SOCS4	Q8WXH5	440 aa		10.06	□□□□□ -0.8
NCBP3-206	ENST00000576523	MAML3	Q96JK9	1138 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms