RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 RGS22Q8NE09 1264 aa10.61□□□□□ -0.71
SMG6-218ENST00000575454 CHMP4CQ96CF2 233 aa10.61□□□□□ -0.71
SMG6-218ENST00000575454 PURBQ96QR8 312 aaKnown RBP10.61□□□□□ -0.71
SMG6-218ENST00000575454 UBE2ZQ9H832 354 aaPredicted RBP10.61□□□□□ -0.71
SMG6-218ENST00000575454 IL17RBQ9NRM6 502 aa10.61□□□□□ -0.71
SMG6-218ENST00000575454 CTNNA3Q9UI47 895 aa10.61□□□□□ -0.71
SMG6-218ENST00000575454 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.6□□□□□ -0.71
SMG6-218ENST00000575454 NFIBO00712 420 aa10.6□□□□□ -0.71
SMG6-218ENST00000575454 ORC4O43929 436 aa10.6□□□□□ -0.71
SMG6-218ENST00000575454 ARHGEF15O94989 841 aa10.6□□□□□ -0.71
SMG6-218ENST00000575454 GJB5O95377 273 aa10.6□□□□□ -0.71
SMG6-218ENST00000575454 CXCL10P02778 98 aa10.6□□□□□ -0.71
SMG6-218ENST00000575454 TOP1P11387 765 aaKnown RBP10.6□□□□□ -0.71
SMG6-218ENST00000575454 CASTP20810 708 aaKnown RBP10.6□□□□□ -0.71
SMG6-218ENST00000575454 RBL2Q08999 1139 aa10.6□□□□□ -0.71
SMG6-218ENST00000575454 IKBKEQ14164 716 aa10.6□□□□□ -0.71
SMG6-218ENST00000575454 LRRC8DQ7L1W4 858 aa10.6□□□□□ -0.71
SMG6-218ENST00000575454 CRBNQ96SW2 442 aa10.6□□□□□ -0.71
SMG6-218ENST00000575454 KCNH6Q9H252 994 aa10.6□□□□□ -0.71
SMG6-218ENST00000575454 C11orf16Q9NQ32 467 aa10.6□□□□□ -0.71
SMG6-218ENST00000575454 ANAPC4Q9UJX5 808 aa10.6□□□□□ -0.71
SMG6-218ENST00000575454 MTMR7Q9Y216 660 aa10.6□□□□□ -0.71
SMG6-218ENST00000575454 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.6□□□□□ -0.71
SMG6-218ENST00000575454 TTC41PQ6P2S7 1318 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 WDR19Q8NEZ3 1342 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 SMCHD1A6NHR9 2005 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 FAM86C2PA6NEL3 165 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 GH1P01241 217 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 SSTR3P32745 418 aaPredicted RBP10.59□□□□□ -0.71
SMG6-218ENST00000575454 SLC16A2P36021 539 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 CHMP4BP1P59074 171 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 RPS6P62753 249 aaKnown RBP10.59□□□□□ -0.71
SMG6-218ENST00000575454 PTPROQ16827 1216 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 CSPP1Q1MSJ5 1256 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 ZMYM1Q5SVZ6 1142 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 SLC30A10Q6XR72 485 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 FAM178BQ8IXR5 827 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 C7orf31Q8N865 590 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 GDPD5Q8WTR4 605 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 CLEC4DQ8WXI8 215 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 FSD1Q9BTV5 496 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 KATNAL1Q9BW62 490 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 DCTPP1Q9H773 170 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 SUGCTQ9HAC7 445 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 FAM50BQ9Y247 325 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 INSL6Q9Y581 213 aa10.59□□□□□ -0.71
SMG6-218ENST00000575454 LCHNA4D1U4 455 aa10.58□□□□□ -0.72
SMG6-218ENST00000575454 NMT2O60551 498 aa10.58□□□□□ -0.72
SMG6-218ENST00000575454 FGRP09769 529 aa10.58□□□□□ -0.72
SMG6-218ENST00000575454 KCNA5P22460 613 aa10.58□□□□□ -0.72
SMG6-218ENST00000575454 DGKDQ16760 1214 aa10.58□□□□□ -0.72
SMG6-218ENST00000575454 TSHZ3Q63HK5 1081 aa10.58□□□□□ -0.72
SMG6-218ENST00000575454 TTBK2Q6IQ55 1244 aa10.58□□□□□ -0.72
SMG6-218ENST00000575454 ALYREFQ86V81 257 aaKnown RBP10.58□□□□□ -0.72
SMG6-218ENST00000575454 AFG1LQ8WV93 481 aa10.58□□□□□ -0.72
SMG6-218ENST00000575454 KHSRPQ92945 711 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMG6-218ENST00000575454 SEC62Q99442 399 aaKnown RBP10.58□□□□□ -0.72
SMG6-218ENST00000575454 GPCPD1Q9NPB8 672 aa10.58□□□□□ -0.72
SMG6-218ENST00000575454 TCP11L1Q9NUJ3 509 aa10.58□□□□□ -0.72
SMG6-218ENST00000575454 LINC01553A4QN01 128 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 MMP3P08254 477 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 CKBP12277 381 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 CTDSPL2Q05D32 466 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 PTK7Q13308 1070 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 PTCRAQ6ISU1 281 aaPredicted RBP10.57□□□□□ -0.72
SMG6-218ENST00000575454 GDF6Q6KF10 455 aaPredicted RBP10.57□□□□□ -0.72
SMG6-218ENST00000575454 CCDC62Q6P9F0 684 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 MCF2L2Q86YR7 1114 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 NSUN6Q8TEA1 469 aaKnown RBP10.57□□□□□ -0.72
SMG6-218ENST00000575454 COPS5Q92905 334 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 MRPL38Q96DV4 380 aaKnown RBP10.57□□□□□ -0.72
SMG6-218ENST00000575454 TTC14Q96N46 770 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 SAMD11Q96NU1 681 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 UIMC1Q96RL1 719 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 IWS1Q96ST2 819 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 TMEM47Q9BQJ4 181 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 CD320Q9NPF0 282 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 TOMM22Q9NS69 142 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 GTF2IRD1Q9UHL9 959 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 MTUS1Q9ULD2 1270 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 TRIOO75962 3097 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 FRMPD2Q68DX3 1309 aaPredicted RBP10.57□□□□□ -0.72
SMG6-218ENST00000575454 EMSYQ7Z589 1322 aa10.57□□□□□ -0.72
SMG6-218ENST00000575454 CFAP54Q96N23 3096 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 TCF20Q9UGU0 1960 aaKnown RBP10.56□□□□□ -0.72
SMG6-218ENST00000575454 MYO5AQ9Y4I1 1855 aaKnown RBP10.56□□□□□ -0.72
SMG6-218ENST00000575454 GRXCR2A6NFK2 248 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 NCK2O43639 380 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 NBNO60934 754 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 AMHP03971 560 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 PDHBP11177 359 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 PCP11498 1178 aaKnown RBP10.56□□□□□ -0.72
SMG6-218ENST00000575454 NT5C2P49902 561 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 DEFB103AP81534 67 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 ZNF543Q08ER8 600 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 LAMC2Q13753 1193 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 GPNMBQ14956 572 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 ALX1Q15699 326 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 STXBP2Q15833 593 aa10.56□□□□□ -0.72
SMG6-218ENST00000575454 TIGD5Q53EQ6 642 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms