RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 NSUN6Q8TEA1 469 aaKnown RBP13.91□□□□□ -0.18
USP43-206ENST00000575346 SCFD2Q8WU76 684 aa13.91□□□□□ -0.18
USP43-206ENST00000575346 TAAR1Q96RJ0 339 aa13.91□□□□□ -0.18
USP43-206ENST00000575346 PNMA6FA0A0J9YX94 578 aa13.9□□□□□ -0.18
USP43-206ENST00000575346 DCDC2CA8MYV0 355 aa13.9□□□□□ -0.18
USP43-206ENST00000575346 PQBP1O60828 265 aaKnown RBP13.9□□□□□ -0.18
USP43-206ENST00000575346 COL9A3Q14050 684 aaPredicted RBP13.9□□□□□ -0.18
USP43-206ENST00000575346 SGMS1Q86VZ5 419 aa13.9□□□□□ -0.18
USP43-206ENST00000575346 PIGSQ96S52 555 aa13.9□□□□□ -0.18
USP43-206ENST00000575346 RMDN3Q96TC7 470 aa13.9□□□□□ -0.18
USP43-206ENST00000575346 SPZ1Q9BXG8 430 aa13.9□□□□□ -0.18
USP43-206ENST00000575346 PRDM5Q9NQX1 630 aaPredicted RBP13.9□□□□□ -0.18
USP43-206ENST00000575346 PCDHA1Q9Y5I3 950 aa13.9□□□□□ -0.18
USP43-206ENST00000575346 COL6A3P12111 3177 aa13.89□□□□□ -0.19
USP43-206ENST00000575346 CFBP00751 764 aa13.89□□□□□ -0.19
USP43-206ENST00000575346 PTGS1P23219 599 aa13.89□□□□□ -0.19
USP43-206ENST00000575346 ITGB8P26012 769 aa13.89□□□□□ -0.19
USP43-206ENST00000575346 KIF5BP33176 963 aa13.89□□□□□ -0.19
USP43-206ENST00000575346 PPP2R5BQ15173 497 aa13.89□□□□□ -0.19
USP43-206ENST00000575346 CCDC62Q6P9F0 684 aa13.89□□□□□ -0.19
USP43-206ENST00000575346 CXCL17Q6UXB2 119 aa13.89□□□□□ -0.19
USP43-206ENST00000575346 FAM126BQ8IXS8 530 aa13.89□□□□□ -0.19
USP43-206ENST00000575346 CTCFLQ8NI51 663 aaPredicted RBP13.89□□□□□ -0.19
USP43-206ENST00000575346 BADQ92934 168 aa13.89□□□□□ -0.19
USP43-206ENST00000575346 LZTS2Q9BRK4 669 aa13.89□□□□□ -0.19
USP43-206ENST00000575346 GPHNQ9NQX3 736 aaPredicted RBP13.89□□□□□ -0.19
USP43-206ENST00000575346 TBX21Q9UL17 535 aa13.89□□□□□ -0.19
USP43-206ENST00000575346 GRIN2DO15399 1336 aa13.89□□□□□ -0.19
USP43-206ENST00000575346 KIAA1217Q5T5P2 1943 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 CD4P01730 458 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 CALM1P0DP23 149 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 CALM2P0DP24 149 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 CALM3P0DP25 149 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 GNAQP50148 359 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 CPT1AP50416 773 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 TTLL4Q14679 1199 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 STXBP2Q15833 593 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 ARHGEF16Q5VV41 709 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 HOMER1Q86YM7 354 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 KCNB2Q92953 911 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 NEK1Q96PY6 1258 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 PXMP2Q9NR77 195 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 TMEM39AQ9NV64 488 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 POLR3EQ9NVU0 708 aa13.88□□□□□ -0.19
USP43-206ENST00000575346 BAZ2BQ9UIF8 2168 aaKnown RBP13.88□□□□□ -0.19
USP43-206ENST00000575346 CCDC69A6NI79 296 aa13.87□□□□□ -0.19
USP43-206ENST00000575346 A6NJR5 290 aa13.87□□□□□ -0.19
USP43-206ENST00000575346 EIF3JO75822 258 aaKnown RBP13.87□□□□□ -0.19
USP43-206ENST00000575346 ARIH2O95376 493 aa13.87□□□□□ -0.19
USP43-206ENST00000575346 TIMP1P01033 207 aa13.87□□□□□ -0.19
USP43-206ENST00000575346 NR3C2P08235 984 aa13.87□□□□□ -0.19
USP43-206ENST00000575346 TXNP10599 105 aaKnown RBP13.87□□□□□ -0.19
USP43-206ENST00000575346 RAG1P15918 1043 aa13.87□□□□□ -0.19
USP43-206ENST00000575346 PURAQ00577 322 aaKnown RBP13.87□□□□□ -0.19
USP43-206ENST00000575346 EXOSC10Q01780 885 aaKnown RBP13.87□□□□□ -0.19
USP43-206ENST00000575346 ITGA7Q13683 1181 aa13.87□□□□□ -0.19
USP43-206ENST00000575346 RASEFQ8IZ41 740 aa13.87□□□□□ -0.19
USP43-206ENST00000575346 DEFB123Q8N688 67 aa13.87□□□□□ -0.19
USP43-206ENST00000575346 OR6J1Q8NGC5 347 aa13.87□□□□□ -0.19
USP43-206ENST00000575346 VTI1AQ96AJ9 217 aa13.87□□□□□ -0.19
USP43-206ENST00000575346 PDCD2LQ9BRP1 358 aa13.87□□□□□ -0.19
USP43-206ENST00000575346 MYL10Q9BUA6 226 aa13.87□□□□□ -0.19
USP43-206ENST00000575346 A0A0C4DFX4 3053 aa13.87□□□□□ -0.19
USP43-206ENST00000575346 GCOM1H8Y6P7 765 aaPredicted RBP13.86□□□□□ -0.19
USP43-206ENST00000575346 TLR3O15455 904 aaKnown RBP13.86□□□□□ -0.19
USP43-206ENST00000575346 KPNA6O60684 536 aa13.86□□□□□ -0.19
USP43-206ENST00000575346 POLR2MP0CAP2 368 aa13.86□□□□□ -0.19
USP43-206ENST00000575346 EIF2AK2P19525 551 aaKnown RBP13.86□□□□□ -0.19
USP43-206ENST00000575346 KRT32Q14532 448 aa13.86□□□□□ -0.19
USP43-206ENST00000575346 BRDTQ58F21 947 aaPredicted RBP13.86□□□□□ -0.19
USP43-206ENST00000575346 ERICH6BQ5W0A0 696 aa13.86□□□□□ -0.19
USP43-206ENST00000575346 NFXL1Q6ZNB6 911 aa13.86□□□□□ -0.19
USP43-206ENST00000575346 Q7L0L9 218 aa13.86□□□□□ -0.19
USP43-206ENST00000575346 DHX32Q7L7V1 743 aaKnown RBP13.86□□□□□ -0.19
USP43-206ENST00000575346 VSIG10LQ86VR7 867 aa13.86□□□□□ -0.19
USP43-206ENST00000575346 SRBD1Q8N5C6 995 aaKnown RBP13.86□□□□□ -0.19
USP43-206ENST00000575346 SLC12A7Q9Y666 1083 aa13.86□□□□□ -0.19
USP43-206ENST00000575346 FRMPD4Q14CM0 1322 aa13.86□□□□□ -0.19
USP43-206ENST00000575346 SCN10AQ9Y5Y9 1956 aa13.85□□□□□ -0.19
USP43-206ENST00000575346 EPB41L2O43491 1005 aaKnown RBP13.85□□□□□ -0.19
USP43-206ENST00000575346 NEFLP07196 543 aa13.85□□□□□ -0.19
USP43-206ENST00000575346 PGM5Q15124 567 aa13.85□□□□□ -0.19
USP43-206ENST00000575346 SHHQ15465 462 aa13.85□□□□□ -0.19
USP43-206ENST00000575346 ADCK5Q3MIX3 580 aa13.85□□□□□ -0.19
USP43-206ENST00000575346 MFSD5Q6N075 450 aa13.85□□□□□ -0.19
USP43-206ENST00000575346 SEPT14Q6ZU15 432 aa13.85□□□□□ -0.19
USP43-206ENST00000575346 FANCBQ8NB91 859 aa13.85□□□□□ -0.19
USP43-206ENST00000575346 COPS5Q92905 334 aa13.85□□□□□ -0.19
USP43-206ENST00000575346 EMID1Q96A84 441 aaPredicted RBP13.85□□□□□ -0.19
USP43-206ENST00000575346 RRP36Q96EU6 259 aaKnown RBP13.85□□□□□ -0.19
USP43-206ENST00000575346 MTG1Q9BT17 334 aaPredicted RBP13.85□□□□□ -0.19
USP43-206ENST00000575346 DDX41Q9UJV9 622 aaKnown RBP13.85□□□□□ -0.19
USP43-206ENST00000575346 PIK3CDO00329 1044 aa13.84□□□□□ -0.19
USP43-206ENST00000575346 RGS20O76081 388 aa13.84□□□□□ -0.19
USP43-206ENST00000575346 PLEKHA8P1O95397 391 aa13.84□□□□□ -0.19
USP43-206ENST00000575346 GH1P01241 217 aa13.84□□□□□ -0.19
USP43-206ENST00000575346 HMGB1P09429 215 aaKnown RBP13.84□□□□□ -0.19
USP43-206ENST00000575346 HOXA13P31271 388 aaPredicted RBP13.84□□□□□ -0.19
USP43-206ENST00000575346 HSPA4P34932 840 aa13.84□□□□□ -0.19
USP43-206ENST00000575346 ARHGAP1Q07960 439 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms