RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 NSUN6Q8TEA1 469 aaKnown RBP22.87■■□□□ 1.25
SCARF1-208ENST00000574545 IWS1Q96ST2 819 aa22.87■■□□□ 1.25
SCARF1-208ENST00000574545 RMDN3Q96TC7 470 aa22.87■■□□□ 1.25
SCARF1-208ENST00000574545 MAP3K20Q9NYL2 800 aaKnown RBP22.87■■□□□ 1.25
SCARF1-208ENST00000574545 TBX21Q9UL17 535 aa22.87■■□□□ 1.25
SCARF1-208ENST00000574545 PNMA6FA0A0J9YX94 578 aa22.86■■□□□ 1.25
SCARF1-208ENST00000574545 DCDC2CA8MYV0 355 aa22.86■■□□□ 1.25
SCARF1-208ENST00000574545 ARIH2O95376 493 aa22.86■■□□□ 1.25
SCARF1-208ENST00000574545 CFBP00751 764 aa22.86■■□□□ 1.25
SCARF1-208ENST00000574545 SMARCA1P28370 1054 aa22.86■■□□□ 1.25
SCARF1-208ENST00000574545 CCDC62Q6P9F0 684 aa22.86■■□□□ 1.25
SCARF1-208ENST00000574545 HOMER1Q86YM7 354 aa22.86■■□□□ 1.25
SCARF1-208ENST00000574545 FAM126BQ8IXS8 530 aa22.86■■□□□ 1.25
SCARF1-208ENST00000574545 SAMD3Q8N6K7 520 aa22.86■■□□□ 1.25
SCARF1-208ENST00000574545 SCFD2Q8WU76 684 aa22.86■■□□□ 1.25
SCARF1-208ENST00000574545 MYL10Q9BUA6 226 aa22.86■■□□□ 1.25
SCARF1-208ENST00000574545 TMEM39AQ9NV64 488 aa22.86■■□□□ 1.25
SCARF1-208ENST00000574545 MROH7Q68CQ1 1323 aa22.85■■□□□ 1.25
SCARF1-208ENST00000574545 NKRFO15226 690 aaKnown RBP eCLIP22.85■■□□□ 1.25
SCARF1-208ENST00000574545 ZEB2O60315 1214 aa22.85■■□□□ 1.25
SCARF1-208ENST00000574545 CD4P01730 458 aa22.85■■□□□ 1.25
SCARF1-208ENST00000574545 RASEFQ8IZ41 740 aa22.85■■□□□ 1.25
SCARF1-208ENST00000574545 COPS5Q92905 334 aa22.85■■□□□ 1.25
SCARF1-208ENST00000574545 VTI1AQ96AJ9 217 aa22.85■■□□□ 1.25
SCARF1-208ENST00000574545 PXMP2Q9NR77 195 aa22.85■■□□□ 1.25
SCARF1-208ENST00000574545 LAMA2P24043 3122 aaKnown RBP22.85■■□□□ 1.25
SCARF1-208ENST00000574545 SPZ1Q9BXG8 430 aa22.84■■□□□ 1.25
SCARF1-208ENST00000574545 A6NJR5 290 aa22.83■■□□□ 1.25
SCARF1-208ENST00000574545 NR3C2P08235 984 aa22.83■■□□□ 1.25
SCARF1-208ENST00000574545 TXNP10599 105 aaKnown RBP22.83■■□□□ 1.25
SCARF1-208ENST00000574545 EXOSC10Q01780 885 aaKnown RBP22.83■■□□□ 1.25
SCARF1-208ENST00000574545 TRAF1Q13077 416 aa22.83■■□□□ 1.25
SCARF1-208ENST00000574545 ITGA7Q13683 1181 aa22.83■■□□□ 1.25
SCARF1-208ENST00000574545 TTLL4Q14679 1199 aa22.83■■□□□ 1.25
SCARF1-208ENST00000574545 PPP2R5BQ15173 497 aa22.83■■□□□ 1.25
SCARF1-208ENST00000574545 STXBP2Q15833 593 aa22.83■■□□□ 1.25
SCARF1-208ENST00000574545 RNF20Q5VTR2 975 aa22.83■■□□□ 1.25
SCARF1-208ENST00000574545 GPR153Q6NV75 609 aa22.83■■□□□ 1.25
SCARF1-208ENST00000574545 SGMS1Q86VZ5 419 aa22.83■■□□□ 1.25
SCARF1-208ENST00000574545 OR6J1Q8NGC5 347 aa22.83■■□□□ 1.25
SCARF1-208ENST00000574545 CTCFLQ8NI51 663 aaPredicted RBP22.83■■□□□ 1.25
SCARF1-208ENST00000574545 LRRC2Q9BYS8 371 aa22.83■■□□□ 1.25
SCARF1-208ENST00000574545 TIMP1P01033 207 aa22.82■■□□□ 1.24
SCARF1-208ENST00000574545 RAG1P15918 1043 aa22.82■■□□□ 1.24
SCARF1-208ENST00000574545 EIF2AK2P19525 551 aaKnown RBP22.82■■□□□ 1.24
SCARF1-208ENST00000574545 KIF5BP33176 963 aa22.82■■□□□ 1.24
SCARF1-208ENST00000574545 PURAQ00577 322 aaKnown RBP22.82■■□□□ 1.24
SCARF1-208ENST00000574545 SHHQ15465 462 aa22.82■■□□□ 1.24
SCARF1-208ENST00000574545 C9orf50Q5SZB4 431 aa22.82■■□□□ 1.24
SCARF1-208ENST00000574545 ARHGEF16Q5VV41 709 aa22.82■■□□□ 1.24
SCARF1-208ENST00000574545 SRBD1Q8N5C6 995 aaKnown RBP22.82■■□□□ 1.24
SCARF1-208ENST00000574545 KCNB2Q92953 911 aa22.82■■□□□ 1.24
SCARF1-208ENST00000574545 NEK1Q96PY6 1258 aa22.82■■□□□ 1.24
SCARF1-208ENST00000574545 PDCD2LQ9BRP1 358 aa22.82■■□□□ 1.24
SCARF1-208ENST00000574545 SEZ6LQ9BYH1 1024 aa22.82■■□□□ 1.24
SCARF1-208ENST00000574545 CCDC69A6NI79 296 aa22.81■■□□□ 1.24
SCARF1-208ENST00000574545 EIF3JO75822 258 aaKnown RBP22.81■■□□□ 1.24
SCARF1-208ENST00000574545 PLEKHA8P1O95397 391 aa22.81■■□□□ 1.24
SCARF1-208ENST00000574545 HOXA13P31271 388 aaPredicted RBP22.81■■□□□ 1.24
SCARF1-208ENST00000574545 CPT1AP50416 773 aa22.81■■□□□ 1.24
SCARF1-208ENST00000574545 EPHB4P54760 987 aa22.81■■□□□ 1.24
SCARF1-208ENST00000574545 PSMC6P62333 389 aa22.81■■□□□ 1.24
SCARF1-208ENST00000574545 ADCK5Q3MIX3 580 aa22.81■■□□□ 1.24
SCARF1-208ENST00000574545 LZTS2Q9BRK4 669 aa22.81■■□□□ 1.24
SCARF1-208ENST00000574545 POLR3EQ9NVU0 708 aa22.81■■□□□ 1.24
SCARF1-208ENST00000574545 RGS20O76081 388 aa22.8■■□□□ 1.24
SCARF1-208ENST00000574545 RXRAP19793 462 aa22.8■■□□□ 1.24
SCARF1-208ENST00000574545 NFXL1Q6ZNB6 911 aa22.8■■□□□ 1.24
SCARF1-208ENST00000574545 SEPT14Q6ZU15 432 aa22.8■■□□□ 1.24
SCARF1-208ENST00000574545 VSIG10LQ86VR7 867 aa22.8■■□□□ 1.24
SCARF1-208ENST00000574545 DDX41Q9UJV9 622 aaKnown RBP22.8■■□□□ 1.24
SCARF1-208ENST00000574545 KIAA1217Q5T5P2 1943 aa22.79■■□□□ 1.24
SCARF1-208ENST00000574545 GCOM1H8Y6P7 765 aaPredicted RBP22.79■■□□□ 1.24
SCARF1-208ENST00000574545 POLR2MP0CAP2 368 aa22.79■■□□□ 1.24
SCARF1-208ENST00000574545 CALM1P0DP23 149 aa22.79■■□□□ 1.24
SCARF1-208ENST00000574545 CALM2P0DP24 149 aa22.79■■□□□ 1.24
SCARF1-208ENST00000574545 CALM3P0DP25 149 aa22.79■■□□□ 1.24
SCARF1-208ENST00000574545 GNAQP50148 359 aa22.79■■□□□ 1.24
SCARF1-208ENST00000574545 LY6KQ17RY6 165 aa22.79■■□□□ 1.24
SCARF1-208ENST00000574545 MFSD5Q6N075 450 aa22.79■■□□□ 1.24
SCARF1-208ENST00000574545 DHX32Q7L7V1 743 aaKnown RBP22.79■■□□□ 1.24
SCARF1-208ENST00000574545 PIBF1Q8WXW3 757 aa22.79■■□□□ 1.24
SCARF1-208ENST00000574545 SLC12A7Q9Y666 1083 aa22.79■■□□□ 1.24
SCARF1-208ENST00000574545 SCN10AQ9Y5Y9 1956 aa22.79■■□□□ 1.24
SCARF1-208ENST00000574545 TLR3O15455 904 aaKnown RBP22.78■■□□□ 1.24
SCARF1-208ENST00000574545 ARHGAP1Q07960 439 aa22.78■■□□□ 1.24
SCARF1-208ENST00000574545 PGM5Q15124 567 aa22.78■■□□□ 1.24
SCARF1-208ENST00000574545 CMTR1Q8N1G2 835 aaKnown RBP22.78■■□□□ 1.24
SCARF1-208ENST00000574545 FANCBQ8NB91 859 aa22.78■■□□□ 1.24
SCARF1-208ENST00000574545 IL31RAQ8NI17 732 aa22.78■■□□□ 1.24
SCARF1-208ENST00000574545 RRP36Q96EU6 259 aaKnown RBP22.78■■□□□ 1.24
SCARF1-208ENST00000574545 MTG1Q9BT17 334 aaPredicted RBP22.78■■□□□ 1.24
SCARF1-208ENST00000574545 MYL3P08590 195 aa22.77■■□□□ 1.24
SCARF1-208ENST00000574545 FPGSQ05932 587 aa22.77■■□□□ 1.24
SCARF1-208ENST00000574545 RAB11FIP4Q86YS3 637 aa22.77■■□□□ 1.24
SCARF1-208ENST00000574545 TCEANC2Q96MN5 208 aa22.77■■□□□ 1.24
SCARF1-208ENST00000574545 FRMPD4Q14CM0 1322 aa22.77■■□□□ 1.24
SCARF1-208ENST00000574545 B4GALT4O60513 344 aa22.76■■□□□ 1.23
SCARF1-208ENST00000574545 KPNA6O60684 536 aa22.76■■□□□ 1.23
SCARF1-208ENST00000574545 GH1P01241 217 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms