RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 CHMLP26374 656 aa24.64■■□□□ 1.54
CHRNB1-206ENST00000574054 PURAQ00577 322 aaKnown RBP24.64■■□□□ 1.54
CHRNB1-206ENST00000574054 SYTL5Q8TDW5 730 aaPredicted RBP24.64■■□□□ 1.54
CHRNB1-206ENST00000574054 MTG1Q9BT17 334 aaPredicted RBP24.64■■□□□ 1.54
CHRNB1-206ENST00000574054 NOC4LQ9BVI4 516 aaKnown RBP24.64■■□□□ 1.54
CHRNB1-206ENST00000574054 ALDH8A1Q9H2A2 487 aaPredicted RBP24.64■■□□□ 1.54
CHRNB1-206ENST00000574054 U3KPZ7 1027 aaPredicted RBP24.64■■□□□ 1.54
CHRNB1-206ENST00000574054 TMEM265A0A087WTH1 108 aa24.63■■□□□ 1.53
CHRNB1-206ENST00000574054 PTH1RQ03431 593 aa24.63■■□□□ 1.53
CHRNB1-206ENST00000574054 TTLL4Q14679 1199 aa24.63■■□□□ 1.53
CHRNB1-206ENST00000574054 SEC23AQ15436 765 aa24.63■■□□□ 1.53
CHRNB1-206ENST00000574054 STAG2Q8N3U4 1231 aa24.63■■□□□ 1.53
CHRNB1-206ENST00000574054 NSUN6Q8TEA1 469 aaKnown RBP24.63■■□□□ 1.53
CHRNB1-206ENST00000574054 TAAR1Q96RJ0 339 aa24.63■■□□□ 1.53
CHRNB1-206ENST00000574054 TRMT13Q9NUP7 481 aaKnown RBP24.63■■□□□ 1.53
CHRNB1-206ENST00000574054 COL20A1Q9P218 1284 aa24.63■■□□□ 1.53
CHRNB1-206ENST00000574054 FAM47CQ5HY64 1035 aa24.62■■□□□ 1.53
CHRNB1-206ENST00000574054 SEPT14Q6ZU15 432 aa24.62■■□□□ 1.53
CHRNB1-206ENST00000574054 MAFAQ8NHW3 353 aaPredicted RBP24.62■■□□□ 1.53
CHRNB1-206ENST00000574054 RMDN3Q96TC7 470 aa24.62■■□□□ 1.53
CHRNB1-206ENST00000574054 MAF1Q9H063 256 aa24.62■■□□□ 1.53
CHRNB1-206ENST00000574054 CDH23Q9H251 3354 aa24.62■■□□□ 1.53
CHRNB1-206ENST00000574054 GRXCR1A8MXD5 290 aa24.61■■□□□ 1.53
CHRNB1-206ENST00000574054 KLRF2D3W0D1 207 aa24.61■■□□□ 1.53
CHRNB1-206ENST00000574054 ARIH2O95376 493 aa24.61■■□□□ 1.53
CHRNB1-206ENST00000574054 CYP21A2P08686 494 aa24.61■■□□□ 1.53
CHRNB1-206ENST00000574054 FOSL2P15408 326 aa24.61■■□□□ 1.53
CHRNB1-206ENST00000574054 TIFAQ96CG3 184 aa24.61■■□□□ 1.53
CHRNB1-206ENST00000574054 CHD9Q3L8U1 2897 aa24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 IFIT3O14879 490 aaKnown RBP24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 KPNA6O60684 536 aa24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 CFBP00751 764 aa24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 FGBP02675 491 aa24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 SUPT20HL2P0C7V6 817 aa24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 CYP2C9P11712 490 aa24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 EIF2AK2P19525 551 aaKnown RBP24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 CHMP4BP1P59074 171 aa24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 NBPF20Q3BBV1 942 aa24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 RASIP1Q5U651 963 aa24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 ARHGEF16Q5VV41 709 aa24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 RALYLQ86SE5 291 aaKnown RBP24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 PPP1R13LQ8WUF5 828 aa24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 AMNQ9BXJ7 453 aa24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 WNT8AQ9H1J5 351 aa24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 MTIF3Q9H2K0 278 aaKnown RBP24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 MAD2L2Q9UI95 211 aa24.6■■□□□ 1.53
CHRNB1-206ENST00000574054 A6NJR5 290 aa24.59■■□□□ 1.53
CHRNB1-206ENST00000574054 STXBP2Q15833 593 aa24.59■■□□□ 1.53
CHRNB1-206ENST00000574054 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.59■■□□□ 1.53
CHRNB1-206ENST00000574054 HERVK_113Q902F9 699 aa24.59■■□□□ 1.53
CHRNB1-206ENST00000574054 SCLYQ96I15 445 aa24.59■■□□□ 1.53
CHRNB1-206ENST00000574054 IWS1Q96ST2 819 aa24.59■■□□□ 1.53
CHRNB1-206ENST00000574054 ERICH2A1L162 156 aa24.58■■□□□ 1.53
CHRNB1-206ENST00000574054 PBX2P40425 430 aa24.58■■□□□ 1.53
CHRNB1-206ENST00000574054 LY6KQ17RY6 165 aa24.58■■□□□ 1.53
CHRNB1-206ENST00000574054 CCDC62Q6P9F0 684 aa24.58■■□□□ 1.53
CHRNB1-206ENST00000574054 CHST3Q7LGC8 479 aa24.58■■□□□ 1.53
CHRNB1-206ENST00000574054 OTOP2Q7RTS6 562 aa24.58■■□□□ 1.53
CHRNB1-206ENST00000574054 PBX4Q9BYU1 374 aa24.58■■□□□ 1.53
CHRNB1-206ENST00000574054 ZNF576Q9H609 170 aa24.58■■□□□ 1.53
CHRNB1-206ENST00000574054 CXXC1Q9P0U4 656 aaPredicted RBP24.58■■□□□ 1.53
CHRNB1-206ENST00000574054 TAF6LQ9Y6J9 622 aa24.58■■□□□ 1.53
CHRNB1-206ENST00000574054 MYH6P13533 1939 aa24.58■■□□□ 1.53
CHRNB1-206ENST00000574054 ZBTB5O15062 677 aa24.57■■□□□ 1.52
CHRNB1-206ENST00000574054 SGSM2O43147 1006 aa24.57■■□□□ 1.52
CHRNB1-206ENST00000574054 GH1P01241 217 aa24.57■■□□□ 1.52
CHRNB1-206ENST00000574054 GRIN2CQ14957 1233 aa24.57■■□□□ 1.52
CHRNB1-206ENST00000574054 HOMER1Q86YM7 354 aa24.57■■□□□ 1.52
CHRNB1-206ENST00000574054 RPUSD2Q8IZ73 545 aaKnown RBP24.57■■□□□ 1.52
CHRNB1-206ENST00000574054 AFG1LQ8WV93 481 aa24.57■■□□□ 1.52
CHRNB1-206ENST00000574054 PCDHA1Q9Y5I3 950 aa24.57■■□□□ 1.52
CHRNB1-206ENST00000574054 PALM3A6NDB9 673 aaPredicted RBP24.56■■□□□ 1.52
CHRNB1-206ENST00000574054 E7EWF7 191 aa24.56■■□□□ 1.52
CHRNB1-206ENST00000574054 PPP1R11O60927 126 aaPredicted RBP24.56■■□□□ 1.52
CHRNB1-206ENST00000574054 GRM4Q14833 912 aa24.56■■□□□ 1.52
CHRNB1-206ENST00000574054 WTAPQ15007 396 aa24.56■■□□□ 1.52
CHRNB1-206ENST00000574054 SART3Q15020 963 aaKnown RBP24.56■■□□□ 1.52
CHRNB1-206ENST00000574054 NFRKBQ6P4R8 1299 aa24.56■■□□□ 1.52
CHRNB1-206ENST00000574054 NCOA7Q8NI08 942 aa24.56■■□□□ 1.52
CHRNB1-206ENST00000574054 SENP2Q9HC62 589 aa24.56■■□□□ 1.52
CHRNB1-206ENST00000574054 PXMP2Q9NR77 195 aa24.56■■□□□ 1.52
CHRNB1-206ENST00000574054 SCN10AQ9Y5Y9 1956 aa24.55■■□□□ 1.52
CHRNB1-206ENST00000574054 NR3C2P08235 984 aa24.55■■□□□ 1.52
CHRNB1-206ENST00000574054 ARHGAP1Q07960 439 aa24.55■■□□□ 1.52
CHRNB1-206ENST00000574054 MTMR8Q96EF0 704 aa24.55■■□□□ 1.52
CHRNB1-206ENST00000574054 MSRAQ9UJ68 235 aa24.55■■□□□ 1.52
CHRNB1-206ENST00000574054 NOD1Q9Y239 953 aa24.55■■□□□ 1.52
CHRNB1-206ENST00000574054 ZBBXA8MT70 800 aa24.54■■□□□ 1.52
CHRNB1-206ENST00000574054 OPLAHO14841 1288 aa24.54■■□□□ 1.52
CHRNB1-206ENST00000574054 EIF3JO75822 258 aaKnown RBP24.54■■□□□ 1.52
CHRNB1-206ENST00000574054 MMP3P08254 477 aa24.54■■□□□ 1.52
CHRNB1-206ENST00000574054 HOXA13P31271 388 aaPredicted RBP24.54■■□□□ 1.52
CHRNB1-206ENST00000574054 HSD17B4P51659 736 aa24.54■■□□□ 1.52
CHRNB1-206ENST00000574054 TMEM67Q5HYA8 995 aa24.54■■□□□ 1.52
CHRNB1-206ENST00000574054 MYCLP12524 364 aaPredicted RBP24.53■■□□□ 1.52
CHRNB1-206ENST00000574054 RAB30Q15771 203 aa24.53■■□□□ 1.52
CHRNB1-206ENST00000574054 SLC35G1Q2M3R5 365 aa24.53■■□□□ 1.52
CHRNB1-206ENST00000574054 STOX1Q6ZVD7 989 aa24.53■■□□□ 1.52
CHRNB1-206ENST00000574054 DEFB128Q7Z7B8 93 aa24.53■■□□□ 1.52
CHRNB1-206ENST00000574054 CATIPQ7Z7H3 387 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms