RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 CYP2C19P33261 490 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 ITIH3Q06033 890 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 KRT32Q14532 448 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 PDXDC2PQ6P474 469 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 RUFY3Q7L099 469 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 CCDC186Q7Z3E2 898 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 SRLQ86TD4 932 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 ATP11CQ8NB49 1132 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 RIOK1Q9BRS2 568 aaKnown RBP9.98□□□□□ -0.81
TVP23A-205ENST00000572428 OSBPL10Q9BXB5 764 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 TTC12Q9H892 705 aaPredicted RBP9.98□□□□□ -0.81
TVP23A-205ENST00000572428 PDRG1Q9NUG6 133 aa9.98□□□□□ -0.81
TVP23A-205ENST00000572428 WDR33Q9C0J8 1336 aaKnown RBP9.98□□□□□ -0.81
TVP23A-205ENST00000572428 FOSP01100 380 aaPredicted RBP9.97□□□□□ -0.81
TVP23A-205ENST00000572428 HSPD1P10809 573 aaKnown RBP9.97□□□□□ -0.81
TVP23A-205ENST00000572428 AK2P54819 239 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 ICA1Q05084 483 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 ANKRD1Q15327 319 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 STRIP1Q5VSL9 837 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 KIAA1614Q5VZ46 1190 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 CDCA2Q69YH5 1023 aaPredicted RBP9.97□□□□□ -0.81
TVP23A-205ENST00000572428 MCTP1Q6DN14 999 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 IRGCQ6NXR0 463 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 PEX5LQ8IYB4 626 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 MAGEB6Q8N7X4 407 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 JAKMIP1Q96N16 626 aaKnown RBP9.97□□□□□ -0.81
TVP23A-205ENST00000572428 STRBPQ96SI9 672 aaKnown RBP9.97□□□□□ -0.81
TVP23A-205ENST00000572428 GAKO14976 1311 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 FAM25EA8MYX2 175 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 PPP1R37O75864 691 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 IDH1O75874 414 aaKnown RBP9.97□□□□□ -0.81
TVP23A-205ENST00000572428 PECAM1P16284 738 aaPredicted RBP9.97□□□□□ -0.81
TVP23A-205ENST00000572428 RAB27AP51159 221 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 ADGRA1Q86SQ6 560 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 ANKRD49Q8WVL7 239 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 STON2Q8WXE9 905 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 CHAMP1Q96JM3 812 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 LMBRD1Q9NUN5 540 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 LRP2BPQ9P2M1 347 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 FARP1Q9Y4F1 1045 aaPredicted RBP9.97□□□□□ -0.81
TVP23A-205ENST00000572428 MTRF1O75570 445 aaKnown RBP9.97□□□□□ -0.81
TVP23A-205ENST00000572428 IBSPP21815 317 aaPredicted RBP9.97□□□□□ -0.81
TVP23A-205ENST00000572428 UBASH3AP57075 661 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 CTAG1AP78358 180 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 COX10Q12887 443 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 PKP1Q13835 747 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 MUM1L1Q5H9M0 696 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 MILR1Q7Z6M3 343 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 DZIP1Q86YF9 867 aaKnown RBP9.97□□□□□ -0.81
TVP23A-205ENST00000572428 NLGN2Q8NFZ4 835 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 KANSL2Q9H9L4 492 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 HDAC6Q9UBN7 1215 aa9.97□□□□□ -0.81
TVP23A-205ENST00000572428 GPAA1O43292 621 aa9.96□□□□□ -0.81
TVP23A-205ENST00000572428 RASA4O43374 803 aa9.96□□□□□ -0.81
TVP23A-205ENST00000572428 ECE2O60344 883 aa9.96□□□□□ -0.81
TVP23A-205ENST00000572428 PRDX5P30044 214 aa9.96□□□□□ -0.81
TVP23A-205ENST00000572428 UBXN2AP68543 259 aa9.96□□□□□ -0.81
TVP23A-205ENST00000572428 RASA2Q15283 850 aa9.96□□□□□ -0.81
TVP23A-205ENST00000572428 CCSAPQ6IQ19 270 aaPredicted RBP9.96□□□□□ -0.81
TVP23A-205ENST00000572428 PPP1R18Q6NYC8 613 aa9.96□□□□□ -0.81
TVP23A-205ENST00000572428 ZNF467Q7Z7K2 595 aaPredicted RBP9.96□□□□□ -0.81
TVP23A-205ENST00000572428 ARL6IP6Q8N6S5 226 aa9.96□□□□□ -0.81
TVP23A-205ENST00000572428 ZNF219Q9P2Y4 722 aaPredicted RBP9.96□□□□□ -0.81
TVP23A-205ENST00000572428 SIPA1L1O43166 1804 aa9.96□□□□□ -0.81
TVP23A-205ENST00000572428 A6NCN8 305 aa9.96□□□□□ -0.82
TVP23A-205ENST00000572428 GSTO1P78417 241 aa9.96□□□□□ -0.82
TVP23A-205ENST00000572428 DMPKQ09013 629 aa9.96□□□□□ -0.82
TVP23A-205ENST00000572428 POSTNQ15063 836 aa9.96□□□□□ -0.82
TVP23A-205ENST00000572428 GPR162Q16538 588 aa9.96□□□□□ -0.82
TVP23A-205ENST00000572428 KBTBD12Q3ZCT8 623 aa9.96□□□□□ -0.82
TVP23A-205ENST00000572428 DACT2Q5SW24 774 aa9.96□□□□□ -0.82
TVP23A-205ENST00000572428 CCDC129Q6ZRS4 1044 aa9.96□□□□□ -0.82
TVP23A-205ENST00000572428 TMCO5AQ8N6Q1 288 aa9.96□□□□□ -0.82
TVP23A-205ENST00000572428 DNAJC25Q9H1X3 360 aa9.96□□□□□ -0.82
TVP23A-205ENST00000572428 FBXL5Q9UKA1 691 aa9.96□□□□□ -0.82
TVP23A-205ENST00000572428 USTQ9Y2C2 406 aa9.96□□□□□ -0.82
TVP23A-205ENST00000572428 MYH8P13535 1937 aa9.96□□□□□ -0.82
TVP23A-205ENST00000572428 STXBP3O00186 592 aa9.95□□□□□ -0.82
TVP23A-205ENST00000572428 NFKBIEO00221 500 aa9.95□□□□□ -0.82
TVP23A-205ENST00000572428 IFRD1O00458 451 aaPredicted RBP9.95□□□□□ -0.82
TVP23A-205ENST00000572428 RIMBP2O15034 1052 aa9.95□□□□□ -0.82
TVP23A-205ENST00000572428 LDHBP07195 334 aaKnown RBP9.95□□□□□ -0.82
TVP23A-205ENST00000572428 HDAC4P56524 1084 aa9.95□□□□□ -0.82
TVP23A-205ENST00000572428 RCN1Q15293 331 aa9.95□□□□□ -0.82
TVP23A-205ENST00000572428 SLC35B4Q969S0 331 aa9.95□□□□□ -0.82
TVP23A-205ENST00000572428 RSRC1Q96IZ7 334 aaKnown RBP9.95□□□□□ -0.82
TVP23A-205ENST00000572428 KCTD5Q9NXV2 234 aa9.95□□□□□ -0.82
TVP23A-205ENST00000572428 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.95□□□□□ -0.82
TVP23A-205ENST00000572428 KIAA1468Q9P260 1216 aa9.95□□□□□ -0.82
TVP23A-205ENST00000572428 A0A1W2PRQ8 180 aa9.95□□□□□ -0.82
TVP23A-205ENST00000572428 YDJCA8MPS7 323 aa9.95□□□□□ -0.82
TVP23A-205ENST00000572428 LMOD1P29536 600 aaPredicted RBP9.95□□□□□ -0.82
TVP23A-205ENST00000572428 GNALP38405 381 aa9.95□□□□□ -0.82
TVP23A-205ENST00000572428 IARSP41252 1262 aaKnown RBP9.95□□□□□ -0.82
TVP23A-205ENST00000572428 ARHGEF6Q15052 776 aa9.95□□□□□ -0.82
TVP23A-205ENST00000572428 GRIK5Q16478 980 aa9.95□□□□□ -0.82
TVP23A-205ENST00000572428 AOC3Q16853 763 aa9.95□□□□□ -0.82
TVP23A-205ENST00000572428 NAA16Q6N069 864 aaPredicted RBP9.95□□□□□ -0.82
TVP23A-205ENST00000572428 TEX11Q8IYF3 940 aa9.95□□□□□ -0.82
TVP23A-205ENST00000572428 CERS5Q8N5B7 392 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms