RNA–Protein interactions for RNA: ENST00000571947.5

TRAPPC1-204, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-204ENST00000571947 SPDYE3A6NKU9 549 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 C19orf81C9J6K1 198 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 TBX3O15119 743 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 ICAM1P05362 532 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 MYL1P05976 194 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 FDX1P10109 184 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 TAL1P17542 331 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 PTPRAP18433 802 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 CDC25BP30305 580 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 CIITAP33076 1130 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 TPM4P67936 248 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 ARHGAP4P98171 946 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 SPP2Q13103 211 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 SEMA3FQ13275 785 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 Q4G0T1 1027 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 NAALADL2Q58DX5 795 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 PRAMEF18Q5VWM3 479 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 C9orf131Q5VYM1 1079 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 LDHDQ86WU2 507 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 SAMD3Q8N6K7 520 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 ZNF280CQ8ND82 737 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 RASSF8Q8NHQ8 419 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 STAMQ92783 540 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 HAS1Q92839 578 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 ZKSCAN4Q969J2 545 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 KLRG1Q96E93 195 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 CALML4Q96GE6 196 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 MRFAP1L1Q96HT8 127 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 C12orf42Q96LP6 360 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 WRNIP1Q96S55 665 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 MTRQ99707 1265 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 MMTAG2Q9BU76 263 aaKnown RBP6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 TRIM5Q9C035 493 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 TTC12Q9H892 705 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 EHMT1Q9H9B1 1298 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 KCNMB3Q9NPA1 279 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 PICK1Q9NRD5 415 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 EMILIN3Q9NT22 766 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 KBTBD4Q9NVX7 518 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 LRWD1Q9UFC0 647 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 PNMA2Q9UL42 364 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 SSUH2Q9Y2M2 353 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 ZNF536O15090 1300 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 PLXNB2O15031 1838 aa6.92□□□□□ -1.3
TRAPPC1-204ENST00000571947 GCOM1H8Y6P7 765 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 MARCH6O60337 910 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 USP2O75604 605 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 CFBP00751 764 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 RPN1P04843 607 aaKnown RBP6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 PTMAP06454 111 aaKnown RBP6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 TPM3P06753 285 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 POLR2MP0CAP2 368 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 PLCG1P19174 1290 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 VCAM1P19320 739 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 ERCC5P28715 1186 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 CASP1P29466 404 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 HOXA13P31271 388 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 BACE1P56817 501 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 MYL5Q02045 173 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 GHRHRQ02643 423 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 GRB10Q13322 594 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 MTMR2Q13614 643 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 CUL4BQ13620 913 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 KCNB1Q14721 858 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 HYIQ5T013 277 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 ZSCAN30Q86W11 494 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 SLFN12Q8IYM2 578 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 FAM43AQ8N2R8 423 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 ENOX1Q8TC92 643 aaKnown RBP6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 LRRC15Q8TF66 581 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 TBC1D5Q92609 795 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 DCPSQ96C86 337 aaKnown RBP6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 L3MBTL3Q96JM7 780 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 PNMA5Q96PV4 448 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 C7orf25Q9BPX7 421 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 TANGO6Q9C0B7 1094 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 HSD3B7Q9H2F3 369 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 RPAP3Q9H6T3 665 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 SLC38A10Q9HBR0 1119 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 RMND1Q9NWS8 449 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 STK17AQ9UEE5 414 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 CCPG1Q9ULG6 757 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 PPP1R9AQ9ULJ8 1098 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 PCDHA12Q9UN75 941 aa6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 ZC3H4Q9UPT8 1303 aaKnown RBP6.91□□□□□ -1.3
TRAPPC1-204ENST00000571947 IGLV3-22A0A075B6J6 115 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 POTEMA6NI47 508 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 GOLGA6L6A8MZA4 724 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 ESPNB1AK53 854 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 PPP1R3GB7ZBB8 358 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 KLRC4O43908 158 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 ZBED4O75132 1171 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 FLOT1O75955 427 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 ZNF76P36508 570 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 HSD17B4P51659 736 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 MAP3K9P80192 1104 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 AMPD3Q01432 767 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 DGKZQ13574 1117 aa6.9□□□□□ -1.3
TRAPPC1-204ENST00000571947 TMEM119Q4V9L6 283 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms