RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SALL4Q9UJQ4 1053 aa19.4■□□□□ 0.7
SCARF1-205ENST00000571272 LRRC53A6NM62 1247 aa19.4■□□□□ 0.7
SCARF1-205ENST00000571272 NONOQ15233 471 aaKnown RBP eCLIP19.4■□□□□ 0.7
SCARF1-205ENST00000571272 SIK3Q9Y2K2 1263 aa19.4■□□□□ 0.7
SCARF1-205ENST00000571272 IRAK1P51617 712 aa19.39■□□□□ 0.7
SCARF1-205ENST00000571272 AMPD3Q01432 767 aa19.39■□□□□ 0.7
SCARF1-205ENST00000571272 GALNT17Q6IS24 598 aa19.39■□□□□ 0.7
SCARF1-205ENST00000571272 MAGEF1Q9HAY2 307 aa19.39■□□□□ 0.7
SCARF1-205ENST00000571272 SAP30BPQ9UHR5 308 aaKnown RBP19.39■□□□□ 0.7
SCARF1-205ENST00000571272 BUB1O43683 1085 aa19.39■□□□□ 0.69
SCARF1-205ENST00000571272 MAGEA1P43355 309 aa19.39■□□□□ 0.69
SCARF1-205ENST00000571272 CCT5P48643 541 aa19.39■□□□□ 0.69
SCARF1-205ENST00000571272 DNA2P51530 1060 aa19.39■□□□□ 0.69
SCARF1-205ENST00000571272 DIXDC1Q155Q3 683 aa19.39■□□□□ 0.69
SCARF1-205ENST00000571272 POTEDQ86YR6 584 aa19.39■□□□□ 0.69
SCARF1-205ENST00000571272 CCDC155Q8N6L0 562 aa19.39■□□□□ 0.69
SCARF1-205ENST00000571272 PALM3A6NDB9 673 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-205ENST00000571272 NOP2P46087 812 aaKnown RBP19.38■□□□□ 0.69
SCARF1-205ENST00000571272 NAP1L1P55209 391 aaKnown RBP19.38■□□□□ 0.69
SCARF1-205ENST00000571272 SEMA3FQ13275 785 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 TTC31Q49AM3 519 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-205ENST00000571272 CENPPQ6IPU0 288 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 TBCKQ8TEA7 893 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 TGFBRAP1Q8WUH2 860 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 CALML4Q96GE6 196 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 ZMYND12Q9H0C1 365 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 BIN2Q9UBW5 565 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-205ENST00000571272 DOT1LQ8TEK3 1739 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 RASSF7Q02833 373 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 GFPT1Q06210 699 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-205ENST00000571272 DDB1Q16531 1140 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 NEK8Q86SG6 692 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 TSEN2Q8NCE0 465 aaKnown RBP19.38■□□□□ 0.69
SCARF1-205ENST00000571272 ANKS1AQ92625 1134 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 SCN7AQ01118 1682 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 MYMKA6NI61 221 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 HNRNPH3P31942 346 aaKnown RBP19.38■□□□□ 0.69
SCARF1-205ENST00000571272 TMED8Q6PL24 325 aaPredicted RBP19.38■□□□□ 0.69
SCARF1-205ENST00000571272 USP17L2Q6R6M4 530 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 SV2BQ7L1I2 683 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 KRT25Q7Z3Z0 450 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 SLC51AQ86UW1 340 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 PLCD3Q8N3E9 789 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 MS4A14Q96JA4 679 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 ALS2CR12Q96Q35 445 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 HYOU1Q9Y4L1 999 aa19.38■□□□□ 0.69
SCARF1-205ENST00000571272 SHOX2O60902 331 aaPredicted RBP19.37■□□□□ 0.69
SCARF1-205ENST00000571272 LRRC41Q15345 812 aa19.37■□□□□ 0.69
SCARF1-205ENST00000571272 ZPR1O75312 459 aa19.37■□□□□ 0.69
SCARF1-205ENST00000571272 HAUS3Q68CZ6 603 aa19.37■□□□□ 0.69
SCARF1-205ENST00000571272 TMC4Q7Z404 712 aa19.37■□□□□ 0.69
SCARF1-205ENST00000571272 MAPKAPK5Q8IW41 473 aa19.37■□□□□ 0.69
SCARF1-205ENST00000571272 GLIS3Q8NEA6 775 aa19.37■□□□□ 0.69
SCARF1-205ENST00000571272 CAPS2Q9BXY5 557 aa19.37■□□□□ 0.69
SCARF1-205ENST00000571272 TANGO6Q9C0B7 1094 aa19.37■□□□□ 0.69
SCARF1-205ENST00000571272 TMEM260Q9NX78 707 aa19.37■□□□□ 0.69
SCARF1-205ENST00000571272 TCP1P17987 556 aaKnown RBP19.36■□□□□ 0.69
SCARF1-205ENST00000571272 TBC1D9BQ66K14 1250 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 ARL8AQ96BM9 186 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 MTMR8Q96EF0 704 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 RBM12Q9NTZ6 932 aaKnown RBP19.36■□□□□ 0.69
SCARF1-205ENST00000571272 BLOC1S4Q9NUP1 217 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 STIM2Q9P246 746 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 KIAA1551Q9HCM1 1747 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 LAMB1P07942 1786 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 KCNQ2O43526 872 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 GRIK5Q16478 980 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 MAN2A1Q16706 1144 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 CLEC4GQ6UXB4 293 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 CACNA2D4Q7Z3S7 1137 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 BCAS4Q8TDM0 211 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 PPM1EQ8WY54 764 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 C6orf50Q9HD87 102 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 NLRC4Q9NPP4 1024 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 MYH1P12882 1939 aa19.36■□□□□ 0.69
SCARF1-205ENST00000571272 PPP1R2P41236 205 aa19.35■□□□□ 0.69
SCARF1-205ENST00000571272 PAFAH1B1P43034 410 aa19.35■□□□□ 0.69
SCARF1-205ENST00000571272 GNGT1P63211 74 aa19.35■□□□□ 0.69
SCARF1-205ENST00000571272 PPFIA1Q13136 1202 aa19.35■□□□□ 0.69
SCARF1-205ENST00000571272 GRB10Q13322 594 aa19.35■□□□□ 0.69
SCARF1-205ENST00000571272 TDRD12Q587J7 1177 aaKnown RBP19.35■□□□□ 0.69
SCARF1-205ENST00000571272 MARCH10Q8NA82 808 aaPredicted RBP19.35■□□□□ 0.69
SCARF1-205ENST00000571272 TLR10Q9BXR5 811 aa19.35■□□□□ 0.69
SCARF1-205ENST00000571272 PRLRP16471 622 aa19.35■□□□□ 0.69
SCARF1-205ENST00000571272 SLC1A4P43007 532 aa19.35■□□□□ 0.69
SCARF1-205ENST00000571272 SOGA3Q5TF21 947 aa19.35■□□□□ 0.69
SCARF1-205ENST00000571272 C8orf74Q6P047 294 aa19.35■□□□□ 0.69
SCARF1-205ENST00000571272 EFCC1Q9HA90 598 aa19.35■□□□□ 0.69
SCARF1-205ENST00000571272 POLD4Q9HCU8 107 aa19.35■□□□□ 0.69
SCARF1-205ENST00000571272 CASZ1Q86V15 1759 aa19.35■□□□□ 0.69
SCARF1-205ENST00000571272 LDHBP07195 334 aaKnown RBP19.34■□□□□ 0.69
SCARF1-205ENST00000571272 CCDC84Q86UT8 332 aaPredicted RBP19.34■□□□□ 0.69
SCARF1-205ENST00000571272 BAP1Q92560 729 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 CDK5RAP3Q96JB5 506 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 PIGSQ96S52 555 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 RUFY1Q96T51 708 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 UBA5Q9GZZ9 404 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 RASA1P20936 1047 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 GNA11P29992 359 aa19.34■□□□□ 0.69
SCARF1-205ENST00000571272 EPHB4P54760 987 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms