RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 IL23AQ9NPF7 189 aa25■■□□□ 1.59
UBFD1-210ENST00000571064 TMEM232C9JQI7 657 aa24.99■■□□□ 1.59
UBFD1-210ENST00000571064 NCOR1O75376 2440 aa24.99■■□□□ 1.59
UBFD1-210ENST00000571064 GRM4Q14833 912 aa24.99■■□□□ 1.59
UBFD1-210ENST00000571064 CCDC144BQ3MJ40 725 aa24.99■■□□□ 1.59
UBFD1-210ENST00000571064 GNASQ5JWF2 1037 aa24.99■■□□□ 1.59
UBFD1-210ENST00000571064 STAG2Q8N3U4 1231 aa24.99■■□□□ 1.59
UBFD1-210ENST00000571064 LARP6Q9BRS8 491 aaKnown RBP24.99■■□□□ 1.59
UBFD1-210ENST00000571064 UPF3AQ9H1J1 476 aaKnown RBP24.99■■□□□ 1.59
UBFD1-210ENST00000571064 SLC28A3Q9HAS3 691 aa24.99■■□□□ 1.59
UBFD1-210ENST00000571064 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.99■■□□□ 1.59
UBFD1-210ENST00000571064 TLR3O15455 904 aaKnown RBP24.98■■□□□ 1.59
UBFD1-210ENST00000571064 DDAH1O94760 285 aa24.98■■□□□ 1.59
UBFD1-210ENST00000571064 RXRAP19793 462 aa24.98■■□□□ 1.59
UBFD1-210ENST00000571064 NEK4P51957 841 aa24.98■■□□□ 1.59
UBFD1-210ENST00000571064 GJA9P57773 515 aa24.98■■□□□ 1.59
UBFD1-210ENST00000571064 FGD1P98174 961 aa24.98■■□□□ 1.59
UBFD1-210ENST00000571064 APOA5Q6Q788 366 aa24.98■■□□□ 1.59
UBFD1-210ENST00000571064 SLF1Q9BQI6 1058 aa24.98■■□□□ 1.59
UBFD1-210ENST00000571064 CPVLQ9H3G5 476 aa24.98■■□□□ 1.59
UBFD1-210ENST00000571064 SPC25Q9HBM1 224 aa24.98■■□□□ 1.59
UBFD1-210ENST00000571064 MAD2L2Q9UI95 211 aa24.98■■□□□ 1.59
UBFD1-210ENST00000571064 FEM1BQ9UK73 627 aa24.98■■□□□ 1.59
UBFD1-210ENST00000571064 SLC12A7Q9Y666 1083 aa24.98■■□□□ 1.59
UBFD1-210ENST00000571064 TCF20Q9UGU0 1960 aaKnown RBP24.98■■□□□ 1.59
UBFD1-210ENST00000571064 KLF18A0A0U1RQI7 1052 aa24.97■■□□□ 1.59
UBFD1-210ENST00000571064 PALM3A6NDB9 673 aaPredicted RBP24.97■■□□□ 1.59
UBFD1-210ENST00000571064 PLA2G6O60733 806 aa24.97■■□□□ 1.59
UBFD1-210ENST00000571064 CD4P01730 458 aa24.97■■□□□ 1.59
UBFD1-210ENST00000571064 FGBP02675 491 aa24.97■■□□□ 1.59
UBFD1-210ENST00000571064 PARP1P09874 1014 aaKnown RBP24.97■■□□□ 1.59
UBFD1-210ENST00000571064 SLC16A2P36021 539 aa24.97■■□□□ 1.59
UBFD1-210ENST00000571064 EVCP57679 992 aa24.97■■□□□ 1.59
UBFD1-210ENST00000571064 BTNL9Q6UXG8 535 aa24.97■■□□□ 1.59
UBFD1-210ENST00000571064 ZNF467Q7Z7K2 595 aaPredicted RBP24.97■■□□□ 1.59
UBFD1-210ENST00000571064 FGD4Q96M96 766 aa24.97■■□□□ 1.59
UBFD1-210ENST00000571064 ABHD16BQ9H3Z7 469 aa24.97■■□□□ 1.59
UBFD1-210ENST00000571064 ISY1Q9ULR0 285 aaKnown RBP24.97■■□□□ 1.59
UBFD1-210ENST00000571064 GBF1Q92538 1859 aa24.97■■□□□ 1.59
UBFD1-210ENST00000571064 UMODL1Q5DID0 1318 aa24.96■■□□□ 1.59
UBFD1-210ENST00000571064 CTAGE5O15320 804 aa24.96■■□□□ 1.59
UBFD1-210ENST00000571064 AK2P54819 239 aa24.96■■□□□ 1.59
UBFD1-210ENST00000571064 SLC35G1Q2M3R5 365 aa24.96■■□□□ 1.59
UBFD1-210ENST00000571064 ASPRV1Q53RT3 343 aa24.96■■□□□ 1.59
UBFD1-210ENST00000571064 OTOP2Q7RTS6 562 aa24.96■■□□□ 1.59
UBFD1-210ENST00000571064 CPXCR1Q8N123 301 aa24.96■■□□□ 1.59
UBFD1-210ENST00000571064 MICALL1Q8N3F8 863 aa24.96■■□□□ 1.59
UBFD1-210ENST00000571064 MCM3APO60318 1980 aa24.95■■□□□ 1.58
UBFD1-210ENST00000571064 BMP1P13497 986 aa24.95■■□□□ 1.58
UBFD1-210ENST00000571064 STAT2P52630 851 aa24.95■■□□□ 1.58
UBFD1-210ENST00000571064 RABGGTBP53611 331 aa24.95■■□□□ 1.58
UBFD1-210ENST00000571064 BEX3Q00994 111 aa24.95■■□□□ 1.58
UBFD1-210ENST00000571064 TFF2Q03403 129 aa24.95■■□□□ 1.58
UBFD1-210ENST00000571064 GPATCH4Q5T3I0 446 aaKnown RBP24.95■■□□□ 1.58
UBFD1-210ENST00000571064 CCDC144CPQ8IYA2 1237 aa24.95■■□□□ 1.58
UBFD1-210ENST00000571064 KIFC2Q96AC6 838 aa24.95■■□□□ 1.58
UBFD1-210ENST00000571064 MAP3K14Q99558 947 aa24.95■■□□□ 1.58
UBFD1-210ENST00000571064 UBA5Q9GZZ9 404 aa24.95■■□□□ 1.58
UBFD1-210ENST00000571064 MTIF3Q9H2K0 278 aaKnown RBP24.95■■□□□ 1.58
UBFD1-210ENST00000571064 PRR12Q9ULL5 1215 aa24.95■■□□□ 1.58
UBFD1-210ENST00000571064 CHD7Q9P2D1 2997 aa24.95■■□□□ 1.58
UBFD1-210ENST00000571064 ARMCX2Q7L311 632 aa24.94■■□□□ 1.58
UBFD1-210ENST00000571064 FAM160B2Q86V87 743 aa24.94■■□□□ 1.58
UBFD1-210ENST00000571064 MICU3Q86XE3 530 aa24.94■■□□□ 1.58
UBFD1-210ENST00000571064 PRPF38AQ8NAV1 312 aaKnown RBP24.94■■□□□ 1.58
UBFD1-210ENST00000571064 CHURC1Q8WUH1 139 aa24.94■■□□□ 1.58
UBFD1-210ENST00000571064 TSPYL2Q9H2G4 693 aaPredicted RBP24.94■■□□□ 1.58
UBFD1-210ENST00000571064 HIPK3Q9H422 1215 aa24.94■■□□□ 1.58
UBFD1-210ENST00000571064 ZBTB43O43298 467 aa24.93■■□□□ 1.58
UBFD1-210ENST00000571064 MYOGP15173 224 aa24.93■■□□□ 1.58
UBFD1-210ENST00000571064 SNAP25P60880 206 aa24.93■■□□□ 1.58
UBFD1-210ENST00000571064 RABEP1Q15276 862 aa24.93■■□□□ 1.58
UBFD1-210ENST00000571064 SYDE2Q5VT97 1194 aa24.93■■□□□ 1.58
UBFD1-210ENST00000571064 ANKRD35Q8N283 1001 aa24.93■■□□□ 1.58
UBFD1-210ENST00000571064 FANCBQ8NB91 859 aa24.93■■□□□ 1.58
UBFD1-210ENST00000571064 RAVER2Q9HCJ3 691 aaKnown RBP24.93■■□□□ 1.58
UBFD1-210ENST00000571064 FAM217BQ9NTX9 383 aaPredicted RBP24.93■■□□□ 1.58
UBFD1-210ENST00000571064 TPCN1Q9ULQ1 816 aa24.93■■□□□ 1.58
UBFD1-210ENST00000571064 BDP1A6H8Y1 2624 aa24.93■■□□□ 1.58
UBFD1-210ENST00000571064 KLRF2D3W0D1 207 aa24.92■■□□□ 1.58
UBFD1-210ENST00000571064 CALM1P0DP23 149 aa24.92■■□□□ 1.58
UBFD1-210ENST00000571064 CALM2P0DP24 149 aa24.92■■□□□ 1.58
UBFD1-210ENST00000571064 CALM3P0DP25 149 aa24.92■■□□□ 1.58
UBFD1-210ENST00000571064 PDIA3P30101 505 aaKnown RBP24.92■■□□□ 1.58
UBFD1-210ENST00000571064 KCNQ1P51787 676 aa24.92■■□□□ 1.58
UBFD1-210ENST00000571064 CCL23P55773 120 aa24.92■■□□□ 1.58
UBFD1-210ENST00000571064 IKQ13123 557 aaPredicted RBP24.92■■□□□ 1.58
UBFD1-210ENST00000571064 CXCL17Q6UXB2 119 aa24.92■■□□□ 1.58
UBFD1-210ENST00000571064 SYNE3Q6ZMZ3 975 aa24.92■■□□□ 1.58
UBFD1-210ENST00000571064 C1QTNF1Q9BXJ1 281 aa24.92■■□□□ 1.58
UBFD1-210ENST00000571064 KATNBL1Q9H079 304 aa24.92■■□□□ 1.58
UBFD1-210ENST00000571064 XIRP2A4UGR9 3374 aa24.91■■□□□ 1.58
UBFD1-210ENST00000571064 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.91■■□□□ 1.58
UBFD1-210ENST00000571064 GOLGA8BA8MQT2 603 aa24.91■■□□□ 1.58
UBFD1-210ENST00000571064 ATP2A1O14983 1001 aa24.91■■□□□ 1.58
UBFD1-210ENST00000571064 ZBED4O75132 1171 aa24.91■■□□□ 1.58
UBFD1-210ENST00000571064 PLEKHA8P1O95397 391 aa24.91■■□□□ 1.58
UBFD1-210ENST00000571064 CDC27P30260 824 aa24.91■■□□□ 1.58
UBFD1-210ENST00000571064 PPP2R2DQ66LE6 453 aa24.91■■□□□ 1.58
UBFD1-210ENST00000571064 SLC43A3Q8NBI5 491 aa24.91■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms