RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 RPS6P62753 249 aaKnown RBP22.33■■□□□ 1.17
SCARF1-204ENST00000570902 TFF2Q03403 129 aa22.33■■□□□ 1.17
SCARF1-204ENST00000570902 C1QTNF1Q9BXJ1 281 aa22.33■■□□□ 1.17
SCARF1-204ENST00000570902 BDP1A6H8Y1 2624 aa22.32■■□□□ 1.16
SCARF1-204ENST00000570902 BAIAP3O94812 1187 aa22.32■■□□□ 1.16
SCARF1-204ENST00000570902 PDHBP11177 359 aa22.32■■□□□ 1.16
SCARF1-204ENST00000570902 HERC6Q8IVU3 1022 aa22.32■■□□□ 1.16
SCARF1-204ENST00000570902 TTC14Q96N46 770 aa22.32■■□□□ 1.16
SCARF1-204ENST00000570902 COG5Q9UP83 839 aa22.32■■□□□ 1.16
SCARF1-204ENST00000570902 PCDHB15Q9Y5E8 787 aa22.32■■□□□ 1.16
SCARF1-204ENST00000570902 TRANK1O15050 2925 aa22.32■■□□□ 1.16
SCARF1-204ENST00000570902 RFXAPO00287 272 aa22.31■■□□□ 1.16
SCARF1-204ENST00000570902 FGAP02671 866 aa22.31■■□□□ 1.16
SCARF1-204ENST00000570902 TXNP10599 105 aaKnown RBP22.31■■□□□ 1.16
SCARF1-204ENST00000570902 ZNF543Q08ER8 600 aa22.31■■□□□ 1.16
SCARF1-204ENST00000570902 CCDC155Q8N6L0 562 aa22.31■■□□□ 1.16
SCARF1-204ENST00000570902 NECAB3Q96P71 396 aaPredicted RBP22.31■■□□□ 1.16
SCARF1-204ENST00000570902 CERS4Q9HA82 394 aa22.31■■□□□ 1.16
SCARF1-204ENST00000570902 RAPGEFL1Q9UHV5 662 aa22.31■■□□□ 1.16
SCARF1-204ENST00000570902 REV3LO60673 3130 aa22.31■■□□□ 1.16
SCARF1-204ENST00000570902 NCOR1O75376 2440 aa22.31■■□□□ 1.16
SCARF1-204ENST00000570902 SCN5AQ14524 2016 aa22.31■■□□□ 1.16
SCARF1-204ENST00000570902 SALL3Q9BXA9 1300 aa22.31■■□□□ 1.16
SCARF1-204ENST00000570902 TANC1Q9C0D5 1861 aa22.3■■□□□ 1.16
SCARF1-204ENST00000570902 PCP11498 1178 aaKnown RBP22.3■■□□□ 1.16
SCARF1-204ENST00000570902 KCNQ1P51787 676 aa22.3■■□□□ 1.16
SCARF1-204ENST00000570902 TAP1Q03518 808 aa22.3■■□□□ 1.16
SCARF1-204ENST00000570902 MCMDC2Q4G0Z9 681 aa22.3■■□□□ 1.16
SCARF1-204ENST00000570902 TICAM2Q86XR7 235 aa22.3■■□□□ 1.16
SCARF1-204ENST00000570902 RGS22Q8NE09 1264 aa22.3■■□□□ 1.16
SCARF1-204ENST00000570902 ARNTL2Q8WYA1 636 aa22.3■■□□□ 1.16
SCARF1-204ENST00000570902 ZMYM6O95789 1325 aa22.3■■□□□ 1.16
SCARF1-204ENST00000570902 CAGE1Q8TC20 777 aa22.29■■□□□ 1.16
SCARF1-204ENST00000570902 AFAP1L1Q8TED9 768 aa22.29■■□□□ 1.16
SCARF1-204ENST00000570902 COPS5Q92905 334 aa22.29■■□□□ 1.16
SCARF1-204ENST00000570902 MAF1Q9H063 256 aa22.29■■□□□ 1.16
SCARF1-204ENST00000570902 EPOPA6NHQ4 379 aa22.28■■□□□ 1.16
SCARF1-204ENST00000570902 SNHG28P0DPA3 235 aa22.28■■□□□ 1.16
SCARF1-204ENST00000570902 PLA2G5P39877 138 aa22.28■■□□□ 1.16
SCARF1-204ENST00000570902 KCNJ6P48051 423 aa22.28■■□□□ 1.16
SCARF1-204ENST00000570902 PTGISQ16647 500 aa22.28■■□□□ 1.16
SCARF1-204ENST00000570902 GPATCH4Q5T3I0 446 aaKnown RBP22.28■■□□□ 1.16
SCARF1-204ENST00000570902 PPP1R13LQ8WUF5 828 aa22.28■■□□□ 1.16
SCARF1-204ENST00000570902 TCF20Q9UGU0 1960 aaKnown RBP22.27■■□□□ 1.16
SCARF1-204ENST00000570902 TLL1O43897 1013 aa22.27■■□□□ 1.16
SCARF1-204ENST00000570902 HSPD1P10809 573 aaKnown RBP22.27■■□□□ 1.16
SCARF1-204ENST00000570902 CHMP4BP1P59074 171 aa22.27■■□□□ 1.16
SCARF1-204ENST00000570902 MFSD6Q6ZSS7 791 aa22.27■■□□□ 1.16
SCARF1-204ENST00000570902 FAM122AQ96E09 287 aa22.27■■□□□ 1.16
SCARF1-204ENST00000570902 ARIH2O95376 493 aa22.26■■□□□ 1.15
SCARF1-204ENST00000570902 PARNO95453 639 aaKnown RBP22.26■■□□□ 1.15
SCARF1-204ENST00000570902 USH1GQ495M9 461 aa22.26■■□□□ 1.15
SCARF1-204ENST00000570902 ANKRD45Q5TZF3 282 aa22.26■■□□□ 1.15
SCARF1-204ENST00000570902 SESTD1Q86VW0 696 aa22.26■■□□□ 1.15
SCARF1-204ENST00000570902 HLA-CQ95604 372 aa22.26■■□□□ 1.15
SCARF1-204ENST00000570902 FAM227BQ96M60 508 aa22.26■■□□□ 1.15
SCARF1-204ENST00000570902 YTHDC1Q96MU7 727 aaKnown RBP22.26■■□□□ 1.15
SCARF1-204ENST00000570902 RNF41Q9H4P4 317 aaPredicted RBP22.26■■□□□ 1.15
SCARF1-204ENST00000570902 PRRC2BQ5JSZ5 2229 aaKnown RBP22.25■■□□□ 1.15
SCARF1-204ENST00000570902 A0A0D9SFI3 127 aa22.25■■□□□ 1.15
SCARF1-204ENST00000570902 GH1P01241 217 aa22.25■■□□□ 1.15
SCARF1-204ENST00000570902 HAND2P61296 217 aa22.25■■□□□ 1.15
SCARF1-204ENST00000570902 CCDC62Q6P9F0 684 aa22.25■■□□□ 1.15
SCARF1-204ENST00000570902 AFG1LQ8WV93 481 aa22.25■■□□□ 1.15
SCARF1-204ENST00000570902 ARHGEF15O94989 841 aa22.24■■□□□ 1.15
SCARF1-204ENST00000570902 MMP3P08254 477 aa22.24■■□□□ 1.15
SCARF1-204ENST00000570902 SELPP16109 830 aa22.24■■□□□ 1.15
SCARF1-204ENST00000570902 CASTP20810 708 aaKnown RBP22.24■■□□□ 1.15
SCARF1-204ENST00000570902 NT5C2P49902 561 aa22.24■■□□□ 1.15
SCARF1-204ENST00000570902 PDE1AP54750 535 aa22.24■■□□□ 1.15
SCARF1-204ENST00000570902 WDR5P61964 334 aaKnown RBP22.24■■□□□ 1.15
SCARF1-204ENST00000570902 GRB10Q13322 594 aa22.24■■□□□ 1.15
SCARF1-204ENST00000570902 KRT40Q6A162 431 aa22.24■■□□□ 1.15
SCARF1-204ENST00000570902 NSUN6Q8TEA1 469 aaKnown RBP22.24■■□□□ 1.15
SCARF1-204ENST00000570902 ABCB11O95342 1321 aa22.24■■□□□ 1.15
SCARF1-204ENST00000570902 GDF6Q6KF10 455 aaPredicted RBP22.23■■□□□ 1.15
SCARF1-204ENST00000570902 SEPT14Q6ZU15 432 aa22.23■■□□□ 1.15
SCARF1-204ENST00000570902 LRRC8DQ7L1W4 858 aa22.23■■□□□ 1.15
SCARF1-204ENST00000570902 DGKHQ86XP1 1220 aa22.23■■□□□ 1.15
SCARF1-204ENST00000570902 MCF2L2Q86YR7 1114 aa22.23■■□□□ 1.15
SCARF1-204ENST00000570902 ESR2Q92731 530 aa22.23■■□□□ 1.15
SCARF1-204ENST00000570902 IWS1Q96ST2 819 aa22.23■■□□□ 1.15
SCARF1-204ENST00000570902 ZBED2Q9BTP6 218 aa22.23■■□□□ 1.15
SCARF1-204ENST00000570902 LMCD1Q9NZU5 365 aa22.23■■□□□ 1.15
SCARF1-204ENST00000570902 CCDC171Q6TFL3 1326 aa22.23■■□□□ 1.15
SCARF1-204ENST00000570902 GOLGA8HP0CJ92 632 aa22.22■■□□□ 1.15
SCARF1-204ENST00000570902 ARHGAP1Q07960 439 aa22.22■■□□□ 1.15
SCARF1-204ENST00000570902 STXBP2Q15833 593 aa22.22■■□□□ 1.15
SCARF1-204ENST00000570902 CDC37Q16543 378 aaPredicted RBP22.22■■□□□ 1.15
SCARF1-204ENST00000570902 DGKDQ16760 1214 aa22.22■■□□□ 1.15
SCARF1-204ENST00000570902 LY6KQ17RY6 165 aa22.22■■□□□ 1.15
SCARF1-204ENST00000570902 CCDC178Q5BJE1 867 aa22.22■■□□□ 1.15
SCARF1-204ENST00000570902 CNKSR3Q6P9H4 555 aa22.22■■□□□ 1.15
SCARF1-204ENST00000570902 ZNF589Q86UQ0 364 aaPredicted RBP22.22■■□□□ 1.15
SCARF1-204ENST00000570902 CTAGE1Q96RT6 745 aa22.22■■□□□ 1.15
SCARF1-204ENST00000570902 KATNAL1Q9BW62 490 aa22.22■■□□□ 1.15
SCARF1-204ENST00000570902 MFAP1P55081 439 aaKnown RBP22.21■■□□□ 1.15
SCARF1-204ENST00000570902 RBL2Q08999 1139 aa22.21■■□□□ 1.15
SCARF1-204ENST00000570902 TBC1D10CQ8IV04 446 aa22.21■■□□□ 1.15
SCARF1-204ENST00000570902 C7orf31Q8N865 590 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms