RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 FAM126BQ8IXS8 530 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 RASEFQ8IZ41 740 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 SRBD1Q8N5C6 995 aaKnown RBP6.28□□□□□ -1.4
CHD3-212ENST00000570758 SLC43A3Q8NBI5 491 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 IL31RAQ8NI17 732 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 PPP1R13LQ8WUF5 828 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 VTI1AQ96AJ9 217 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 TMEM87BQ96K49 555 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 TCEANC2Q96MN5 208 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 RMDN3Q96TC7 470 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 MAP3K14Q99558 947 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 MTA3Q9BTC8 594 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 MAF1Q9H063 256 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 PXMP2Q9NR77 195 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 TMEM39AQ9NV64 488 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 TBX21Q9UL17 535 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 PCDHA1Q9Y5I3 950 aa6.28□□□□□ -1.4
CHD3-212ENST00000570758 BAZ2BQ9UIF8 2168 aaKnown RBP6.27□□□□□ -1.41
CHD3-212ENST00000570758 MYH6P13533 1939 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 PNMA6FA0A0J9YX94 578 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 CCDC69A6NI79 296 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 GCOM1H8Y6P7 765 aaPredicted RBP6.27□□□□□ -1.41
CHD3-212ENST00000570758 NKRFO15226 690 aaKnown RBP eCLIP6.27□□□□□ -1.41
CHD3-212ENST00000570758 ZEB2O60315 1214 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 CABYRO75952 493 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 CD4P01730 458 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 NR3C2P08235 984 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 MYL3P08590 195 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 POLR2MP0CAP2 368 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 RAG1P15918 1043 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 LIFRP42702 1097 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 EXOSC10Q01780 885 aaKnown RBP6.27□□□□□ -1.41
CHD3-212ENST00000570758 ITGA7Q13683 1181 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 TTLL4Q14679 1199 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 PPP2R5BQ15173 497 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 LY6KQ17RY6 165 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 LRIT3Q3SXY7 679 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 TSGA10IPQ3SY00 556 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 ARHGEF16Q5VV41 709 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 SEPT14Q6ZU15 432 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 CMTR1Q8N1G2 835 aaKnown RBP6.27□□□□□ -1.41
CHD3-212ENST00000570758 TMTC2Q8N394 836 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 CTCFLQ8NI51 663 aaPredicted RBP6.27□□□□□ -1.41
CHD3-212ENST00000570758 NSUN6Q8TEA1 469 aaKnown RBP6.27□□□□□ -1.41
CHD3-212ENST00000570758 SCFD2Q8WU76 684 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 KCNB2Q92953 911 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 ZFP91Q96JP5 570 aaPredicted RBP6.27□□□□□ -1.41
CHD3-212ENST00000570758 TOX2Q96NM4 488 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 NEK1Q96PY6 1258 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 IWS1Q96ST2 819 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 MPHOSPH6Q99547 160 aaKnown RBP6.27□□□□□ -1.41
CHD3-212ENST00000570758 PDCD2LQ9BRP1 358 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 SPZ1Q9BXG8 430 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 TRPV6Q9H1D0 765 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 BRPF3Q9ULD4 1205 aa6.27□□□□□ -1.41
CHD3-212ENST00000570758 MROH7Q68CQ1 1323 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 hCG_1642624A0A1W2PR95 340 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 A6NJR5 290 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 B4DLN1 442 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 B4GALT4O60513 344 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 EIF3JO75822 258 aaKnown RBP6.26□□□□□ -1.41
CHD3-212ENST00000570758 RGS20O76081 388 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 TIMP1P01033 207 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 NEFLP07196 543 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 TXNP10599 105 aaKnown RBP6.26□□□□□ -1.41
CHD3-212ENST00000570758 MYCLP12524 364 aaPredicted RBP6.26□□□□□ -1.41
CHD3-212ENST00000570758 CPA1P15085 419 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 SMARCA1P28370 1054 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 KIF5BP33176 963 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 CYP2C18P33260 490 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 CPT1AP50416 773 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 MRPL12P52815 198 aaKnown RBP6.26□□□□□ -1.41
CHD3-212ENST00000570758 PURAQ00577 322 aaKnown RBP6.26□□□□□ -1.41
CHD3-212ENST00000570758 ARHGAP1Q07960 439 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 PGM5Q15124 567 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 STXBP2Q15833 593 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 RNF20Q5VTR2 975 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 TMTC3Q6ZXV5 915 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 Q7L0L9 218 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 DHX32Q7L7V1 743 aaKnown RBP6.26□□□□□ -1.41
CHD3-212ENST00000570758 SGMS1Q86VZ5 419 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 FCHSD1Q86WN1 690 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 MICU3Q86XE3 530 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 SAMD3Q8N6K7 520 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 AFG1LQ8WV93 481 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 GPKOWQ92917 476 aaPredicted RBP eCLIP6.26□□□□□ -1.41
CHD3-212ENST00000570758 RRP36Q96EU6 259 aaKnown RBP6.26□□□□□ -1.41
CHD3-212ENST00000570758 LZTS2Q9BRK4 669 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 MTG1Q9BT17 334 aaPredicted RBP6.26□□□□□ -1.41
CHD3-212ENST00000570758 PPP1R12CQ9BZL4 782 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 POLR3EQ9NVU0 708 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 MAP3K20Q9NYL2 800 aaKnown RBP6.26□□□□□ -1.41
CHD3-212ENST00000570758 SLC12A7Q9Y666 1083 aa6.26□□□□□ -1.41
CHD3-212ENST00000570758 FRMPD4Q14CM0 1322 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 UMODL1Q5DID0 1318 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 MEIS2O14770 477 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 TLR3O15455 904 aaKnown RBP6.25□□□□□ -1.41
CHD3-212ENST00000570758 SORBS3O60504 671 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 KPNA6O60684 536 aa6.25□□□□□ -1.41
CHD3-212ENST00000570758 GH1P01241 217 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms