RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 MPHOSPH6Q99547 160 aaKnown RBP17.55■□□□□ 0.4
RAB40B-203ENST00000570676 VAT1LQ9HCJ6 419 aa17.55■□□□□ 0.4
RAB40B-203ENST00000570676 TIMP1P01033 207 aa17.54■□□□□ 0.4
RAB40B-203ENST00000570676 FPGSQ05932 587 aa17.54■□□□□ 0.4
RAB40B-203ENST00000570676 COL9A3Q14050 684 aaPredicted RBP17.54■□□□□ 0.4
RAB40B-203ENST00000570676 WTAPQ15007 396 aa17.54■□□□□ 0.4
RAB40B-203ENST00000570676 PPP2R5BQ15173 497 aa17.54■□□□□ 0.4
RAB40B-203ENST00000570676 RASEFQ8IZ41 740 aa17.54■□□□□ 0.4
RAB40B-203ENST00000570676 DEFB123Q8N688 67 aa17.54■□□□□ 0.4
RAB40B-203ENST00000570676 SCFD2Q8WU76 684 aa17.54■□□□□ 0.4
RAB40B-203ENST00000570676 KCNB2Q92953 911 aa17.54■□□□□ 0.4
RAB40B-203ENST00000570676 TAAR1Q96RJ0 339 aa17.54■□□□□ 0.4
RAB40B-203ENST00000570676 AMNQ9BXJ7 453 aa17.54■□□□□ 0.4
RAB40B-203ENST00000570676 MRPL11Q9Y3B7 192 aaKnown RBP17.54■□□□□ 0.4
RAB40B-203ENST00000570676 SNX14Q9Y5W7 946 aa17.54■□□□□ 0.4
RAB40B-203ENST00000570676 ERICH2A1L162 156 aa17.53■□□□□ 0.4
RAB40B-203ENST00000570676 ZBTB5O15062 677 aa17.53■□□□□ 0.4
RAB40B-203ENST00000570676 NKRFO15226 690 aaKnown RBP eCLIP17.53■□□□□ 0.4
RAB40B-203ENST00000570676 CYTH3O43739 400 aa17.53■□□□□ 0.4
RAB40B-203ENST00000570676 ZEB2O60315 1214 aa17.53■□□□□ 0.4
RAB40B-203ENST00000570676 ARIH2O95376 493 aa17.53■□□□□ 0.4
RAB40B-203ENST00000570676 HSD17B4P51659 736 aa17.53■□□□□ 0.4
RAB40B-203ENST00000570676 PSMC6P62333 389 aa17.53■□□□□ 0.4
RAB40B-203ENST00000570676 PURAQ00577 322 aaKnown RBP17.53■□□□□ 0.4
RAB40B-203ENST00000570676 ITGA7Q13683 1181 aa17.53■□□□□ 0.4
RAB40B-203ENST00000570676 MCF2L2Q86YR7 1114 aa17.53■□□□□ 0.4
RAB40B-203ENST00000570676 OR6J1Q8NGC5 347 aa17.53■□□□□ 0.4
RAB40B-203ENST00000570676 IGDCC4Q8TDY8 1250 aa17.53■□□□□ 0.4
RAB40B-203ENST00000570676 COPS5Q92905 334 aa17.53■□□□□ 0.4
RAB40B-203ENST00000570676 RIOX1Q9H6W3 641 aa17.53■□□□□ 0.4
RAB40B-203ENST00000570676 TLR3O15455 904 aaKnown RBP17.52■□□□□ 0.4
RAB40B-203ENST00000570676 ANAPC15P60006 121 aa17.52■□□□□ 0.4
RAB40B-203ENST00000570676 SART3Q15020 963 aaKnown RBP17.52■□□□□ 0.4
RAB40B-203ENST00000570676 TMEM67Q5HYA8 995 aa17.52■□□□□ 0.4
RAB40B-203ENST00000570676 MFSD5Q6N075 450 aa17.52■□□□□ 0.4
RAB40B-203ENST00000570676 PIGSQ96S52 555 aa17.52■□□□□ 0.4
RAB40B-203ENST00000570676 LY9Q9HBG7 655 aa17.52■□□□□ 0.4
RAB40B-203ENST00000570676 MTMR10Q9NXD2 777 aa17.52■□□□□ 0.4
RAB40B-203ENST00000570676 MYH7BA7E2Y1 1941 aa17.51■□□□□ 0.39
RAB40B-203ENST00000570676 B4DLN1 442 aa17.51■□□□□ 0.39
RAB40B-203ENST00000570676 CFBP00751 764 aa17.51■□□□□ 0.39
RAB40B-203ENST00000570676 CPT1AP50416 773 aa17.51■□□□□ 0.39
RAB40B-203ENST00000570676 MRPL12P52815 198 aaKnown RBP17.51■□□□□ 0.39
RAB40B-203ENST00000570676 TTLL4Q14679 1199 aa17.51■□□□□ 0.39
RAB40B-203ENST00000570676 TSGA10IPQ3SY00 556 aa17.51■□□□□ 0.39
RAB40B-203ENST00000570676 FAM109BQ6ICB4 259 aaPredicted RBP17.51■□□□□ 0.39
RAB40B-203ENST00000570676 CCDC62Q6P9F0 684 aa17.51■□□□□ 0.39
RAB40B-203ENST00000570676 HOMER1Q86YM7 354 aa17.51■□□□□ 0.39
RAB40B-203ENST00000570676 NSUN6Q8TEA1 469 aaKnown RBP17.51■□□□□ 0.39
RAB40B-203ENST00000570676 GBF1Q92538 1859 aa17.51■□□□□ 0.39
RAB40B-203ENST00000570676 RNPC3Q96LT9 517 aaKnown RBP17.51■□□□□ 0.39
RAB40B-203ENST00000570676 RMDN3Q96TC7 470 aa17.51■□□□□ 0.39
RAB40B-203ENST00000570676 MTA3Q9BTC8 594 aa17.51■□□□□ 0.39
RAB40B-203ENST00000570676 SEZ6LQ9BYH1 1024 aa17.51■□□□□ 0.39
RAB40B-203ENST00000570676 PPP1R12CQ9BZL4 782 aa17.51■□□□□ 0.39
RAB40B-203ENST00000570676 GPHNQ9NQX3 736 aaPredicted RBP17.51■□□□□ 0.39
RAB40B-203ENST00000570676 POLR3EQ9NVU0 708 aa17.51■□□□□ 0.39
RAB40B-203ENST00000570676 UMODL1Q5DID0 1318 aa17.5■□□□□ 0.39
RAB40B-203ENST00000570676 A6NJR5 290 aa17.5■□□□□ 0.39
RAB40B-203ENST00000570676 B4GALT4O60513 344 aa17.5■□□□□ 0.39
RAB40B-203ENST00000570676 TXNP10599 105 aaKnown RBP17.5■□□□□ 0.39
RAB40B-203ENST00000570676 EIF2AK2P19525 551 aaKnown RBP17.5■□□□□ 0.39
RAB40B-203ENST00000570676 KRT32Q14532 448 aa17.5■□□□□ 0.39
RAB40B-203ENST00000570676 IWS1Q96ST2 819 aa17.5■□□□□ 0.39
RAB40B-203ENST00000570676 PXMP2Q9NR77 195 aa17.5■□□□□ 0.39
RAB40B-203ENST00000570676 PCDHA1Q9Y5I3 950 aa17.5■□□□□ 0.39
RAB40B-203ENST00000570676 SCN5AQ14524 2016 aa17.5■□□□□ 0.39
RAB40B-203ENST00000570676 SH2B2O14492 632 aaPredicted RBP17.49■□□□□ 0.39
RAB40B-203ENST00000570676 PRC1O43663 620 aa17.49■□□□□ 0.39
RAB40B-203ENST00000570676 DDAH1O94760 285 aa17.49■□□□□ 0.39
RAB40B-203ENST00000570676 MYL3P08590 195 aa17.49■□□□□ 0.39
RAB40B-203ENST00000570676 CSF2RAP15509 400 aa17.49■□□□□ 0.39
RAB40B-203ENST00000570676 PPIGQ13427 754 aaKnown RBP eCLIP17.49■□□□□ 0.39
RAB40B-203ENST00000570676 C16orf59Q7L2K0 433 aa17.49■□□□□ 0.39
RAB40B-203ENST00000570676 CATIPQ7Z7H3 387 aa17.49■□□□□ 0.39
RAB40B-203ENST00000570676 ZNF654Q8IZM8 581 aa17.49■□□□□ 0.39
RAB40B-203ENST00000570676 JAKMIP1Q96N16 626 aaKnown RBP17.49■□□□□ 0.39
RAB40B-203ENST00000570676 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.49■□□□□ 0.39
RAB40B-203ENST00000570676 MYL10Q9BUA6 226 aa17.49■□□□□ 0.39
RAB40B-203ENST00000570676 NOC4LQ9BVI4 516 aaKnown RBP17.49■□□□□ 0.39
RAB40B-203ENST00000570676 TRPV6Q9H1D0 765 aa17.49■□□□□ 0.39
RAB40B-203ENST00000570676 ALDH8A1Q9H2A2 487 aaPredicted RBP17.49■□□□□ 0.39
RAB40B-203ENST00000570676 DOCK5Q9H7D0 1870 aa17.48■□□□□ 0.39
RAB40B-203ENST00000570676 NR3C2P08235 984 aa17.48■□□□□ 0.39
RAB40B-203ENST00000570676 CYP2C18P33260 490 aa17.48■□□□□ 0.39
RAB40B-203ENST00000570676 SMAD3P84022 425 aaKnown RBP17.48■□□□□ 0.39
RAB40B-203ENST00000570676 ARHGAP1Q07960 439 aa17.48■□□□□ 0.39
RAB40B-203ENST00000570676 STXBP2Q15833 593 aa17.48■□□□□ 0.39
RAB40B-203ENST00000570676 ADCK5Q3MIX3 580 aa17.48■□□□□ 0.39
RAB40B-203ENST00000570676 ARHGEF16Q5VV41 709 aa17.48■□□□□ 0.39
RAB40B-203ENST00000570676 SEPT14Q6ZU15 432 aa17.48■□□□□ 0.39
RAB40B-203ENST00000570676 IL31RAQ8NI17 732 aa17.48■□□□□ 0.39
RAB40B-203ENST00000570676 IL17RAQ96F46 866 aa17.48■□□□□ 0.39
RAB40B-203ENST00000570676 GUCD1Q96NT3 240 aa17.48■□□□□ 0.39
RAB40B-203ENST00000570676 MAP3K14Q99558 947 aa17.48■□□□□ 0.39
RAB40B-203ENST00000570676 KIF2CQ99661 725 aa17.48■□□□□ 0.39
RAB40B-203ENST00000570676 PDCD2LQ9BRP1 358 aa17.48■□□□□ 0.39
RAB40B-203ENST00000570676 MTG1Q9BT17 334 aaPredicted RBP17.48■□□□□ 0.39
RAB40B-203ENST00000570676 HIPK3Q9H422 1215 aa17.48■□□□□ 0.39
RAB40B-203ENST00000570676 MAP3K20Q9NYL2 800 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms