RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 ANKRD35Q8N283 1001 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 MSL3Q8N5Y2 521 aaKnown RBP7.72□□□□□ -1.17
SMG6-204ENST00000570606 PRPF38AQ8NAV1 312 aaKnown RBP7.72□□□□□ -1.17
SMG6-204ENST00000570606 CEP95Q96GE4 821 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 FSD1Q9BTV5 496 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 NACAP1Q9BZK3 213 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 SPC25Q9HBM1 224 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 RAVER2Q9HCJ3 691 aaKnown RBP7.72□□□□□ -1.17
SMG6-204ENST00000570606 HOMER2Q9NSB8 354 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 TMEM39AQ9NV64 488 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 CLIP2Q9UDT6 1046 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 FEM1BQ9UK73 627 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 FAM184BQ9ULE4 1060 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 TACC3Q9Y6A5 838 aa7.72□□□□□ -1.17
SMG6-204ENST00000570606 EYSQ5T1H1 3165 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 IGKV6D-41A0A0C4DH26 115 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 DCDC2CA8MYV0 355 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 ERC2O15083 957 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 ADAMTS4O75173 837 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 TTLL1O95922 423 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 S1PR4O95977 384 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 C6orf222P0C671 652 aaPredicted RBP7.71□□□□□ -1.18
SMG6-204ENST00000570606 TSPY3P0CV98 308 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 TSPY8P0CW00 308 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 ACLYP53396 1101 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 SMAD3P84022 425 aaKnown RBP7.71□□□□□ -1.18
SMG6-204ENST00000570606 PDE4BQ07343 736 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 SLFN13Q68D06 897 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 GMCL1P1Q8NEA9 526 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 MAFAQ8NHW3 353 aaPredicted RBP7.71□□□□□ -1.18
SMG6-204ENST00000570606 FAM174AQ8TBP5 190 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 ADAM32Q8TC27 787 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 NUP133Q8WUM0 1156 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 CDX2Q99626 313 aaPredicted RBP7.71□□□□□ -1.18
SMG6-204ENST00000570606 TSEN34Q9BSV6 310 aaKnown RBP7.71□□□□□ -1.18
SMG6-204ENST00000570606 NAPBQ9H115 298 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 SLC38A10Q9HBR0 1119 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 FBXO40Q9UH90 709 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 MROH7Q68CQ1 1323 aa7.71□□□□□ -1.18
SMG6-204ENST00000570606 PRUNE2Q8WUY3 3088 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 LCTP09848 1927 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 VCANP13611 3396 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 A0A0U1RQG5 324 aaPredicted RBP7.7□□□□□ -1.18
SMG6-204ENST00000570606 MYADML2A6NDP7 307 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 TMEM232C9JQI7 657 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 ATP2A1O14983 1001 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 KIAA0355O15063 1070 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 DUSP11O75319 330 aaKnown RBP7.7□□□□□ -1.18
SMG6-204ENST00000570606 BMP3P12645 472 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 FOSL2P15408 326 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 STAT2P52630 851 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 OAZ1P54368 228 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 ACVR2BQ13705 512 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 KCNA10Q16322 511 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 MAMDC4Q6UXC1 1216 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 NOL8Q76FK4 1167 aaKnown RBP7.7□□□□□ -1.18
SMG6-204ENST00000570606 ARMCX2Q7L311 632 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 IFNL3Q8IZI9 196 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 CHST13Q8NET6 341 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 MYLIPQ8WY64 445 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 VTI1AQ96AJ9 217 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 CHMP4CQ96CF2 233 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 GLT1D1Q96MS3 346 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 DCTPP1Q9H773 170 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 ACAD9Q9H845 621 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 MTMR4Q9NYA4 1195 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 SYNPO2Q9UMS6 1093 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 RIPK3Q9Y572 518 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 TTC41PQ6P2S7 1318 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 GBF1Q92538 1859 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 NCOR1O75376 2440 aa7.7□□□□□ -1.18
SMG6-204ENST00000570606 DNAJC25-GNG10A0A024R161 153 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 TMEM265A0A087WTH1 108 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 TSPY2A6NKD2 308 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 PATL2C9JE40 543 aaKnown RBP7.69□□□□□ -1.18
SMG6-204ENST00000570606 TLR3O15455 904 aaKnown RBP7.69□□□□□ -1.18
SMG6-204ENST00000570606 ATG7O95352 703 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 SNAI1O95863 264 aaPredicted RBP7.69□□□□□ -1.18
SMG6-204ENST00000570606 ASGR1P07306 291 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 ITGB8P26012 769 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 CST5P28325 142 aaPredicted RBP7.69□□□□□ -1.18
SMG6-204ENST00000570606 SLC1A4P43007 532 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 EPHB4P54760 987 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 MCCD1P59942 119 aaPredicted RBP7.69□□□□□ -1.18
SMG6-204ENST00000570606 PPARAQ07869 468 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 FAAP100Q0VG06 881 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 PPIGQ13427 754 aaKnown RBP eCLIP7.69□□□□□ -1.185e-6■■□□□ 13.2
SMG6-204ENST00000570606 CCDC144BQ3MJ40 725 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 CCDC174Q6PII3 467 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 ANKRD33Q7Z3H0 272 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 FAM160B2Q86V87 743 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 CCDC144CPQ8IYA2 1237 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 PCSK9Q8NBP7 692 aaKnown RBP7.69□□□□□ -1.18
SMG6-204ENST00000570606 KLHDC9Q8NEP7 349 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 NEDD1Q8NHV4 660 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 TOX2Q96NM4 488 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 SEC62Q99442 399 aaKnown RBP7.69□□□□□ -1.18
SMG6-204ENST00000570606 ARHGAP9Q9BRR9 750 aa7.69□□□□□ -1.18
SMG6-204ENST00000570606 TTYH1Q9H313 450 aaPredicted RBP7.69□□□□□ -1.18
SMG6-204ENST00000570606 SEMA6BQ9H3T3 888 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms