RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 ACRP10323 421 aa10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 SEC23AQ15436 765 aa10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 TMEM67Q5HYA8 995 aa10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 CHST3Q7LGC8 479 aa10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 CATIPQ7Z7H3 387 aa10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 RPUSD2Q8IZ73 545 aaKnown RBP10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 STAG2Q8N3U4 1231 aa10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 SLC43A3Q8NBI5 491 aa10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 SYTL5Q8TDW5 730 aaPredicted RBP10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 TBC1D5Q92609 795 aa10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 IWS1Q96ST2 819 aa10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.38□□□□□ -0.751e-15■□□□□ 10.6
NPLOC4-204ENST00000570324 TRPV6Q9H1D0 765 aa10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 NOD1Q9Y239 953 aa10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 PCDHA1Q9Y5I3 950 aa10.38□□□□□ -0.75
NPLOC4-204ENST00000570324 ZBTB5O15062 677 aa10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 B4GALT4O60513 344 aa10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 GH1P01241 217 aa10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 FGBP02675 491 aa10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 MYCLP12524 364 aaPredicted RBP10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 EIF2AK2P19525 551 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 EDNRBP24530 442 aa10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 CCL23P55773 120 aa10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 PURAQ00577 322 aaKnown RBP10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 CASC1Q6TDU7 716 aa10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 ZNF365Q70YC5 407 aa10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 COPS5Q92905 334 aa10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 GUCD1Q96NT3 240 aa10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 SEMA6BQ9H3T3 888 aa10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 IL23AQ9NPF7 189 aa10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 MAD2L2Q9UI95 211 aa10.37□□□□□ -0.75
NPLOC4-204ENST00000570324 GRIN2DO15399 1336 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 TMEM265A0A087WTH1 108 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 PALM3A6NDB9 673 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 A6NJR5 290 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 GCOM1H8Y6P7 765 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 EIF3JO75822 258 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 NR3C2P08235 984 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 POLR2MP0CAP2 368 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 CASTP20810 708 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 GRM4Q14833 912 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 LY6KQ17RY6 165 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 NBPF20Q3BBV1 942 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 TMEM240Q5SV17 173 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 NFXL1Q6ZNB6 911 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 RETREG2Q8NC44 543 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 CTCFLQ8NI51 663 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 MAP4K1Q92918 833 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 PIGSQ96S52 555 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 CDX2Q99626 313 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 NOC4LQ9BVI4 516 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 ALDH8A1Q9H2A2 487 aaPredicted RBP10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 MAP3K20Q9NYL2 800 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 COL20A1Q9P218 1284 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 GTF3C3Q9Y5Q9 886 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 RBM8AQ9Y5S9 174 aaKnown RBP10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 MRVI1Q9Y6F6 885 aa10.36□□□□□ -0.75
NPLOC4-204ENST00000570324 PNMA6FA0A0J9YX94 578 aa10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 CCDC69A6NI79 296 aa10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 ZBBXA8MT70 800 aa10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 CYP2C9P11712 490 aa10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 DNAJB2P25686 324 aa10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 KIF5BP33176 963 aa10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 PTPN11Q06124 597 aaPredicted RBP10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 C16orf59Q7L2K0 433 aa10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 OTOP2Q7RTS6 562 aa10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 TMTC2Q8N394 836 aa10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 SAMD3Q8N6K7 520 aa10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 AFG1LQ8WV93 481 aa10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 PIBF1Q8WXW3 757 aa10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 MYLIPQ8WY64 445 aa10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 PXMP2Q9NR77 195 aa10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 TRMT13Q9NUP7 481 aaKnown RBP10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 MSRAQ9UJ68 235 aa10.35□□□□□ -0.75
NPLOC4-204ENST00000570324 UMODL1Q5DID0 1318 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 DLL1O00548 723 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 PRC1O43663 620 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 ARIH2O95376 493 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 ACTN1P12814 892 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 FOSL2P15408 326 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 CCND2P30279 289 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 HOXA13P31271 388 aaPredicted RBP10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 MCM5P33992 734 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 HSD17B4P51659 736 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 LAMC2Q13753 1193 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 RAB30Q15771 203 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 DGKDQ16760 1214 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 NFRKBQ6P4R8 1299 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 CCDC62Q6P9F0 684 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 KCNV1Q6PIU1 500 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 FCHSD1Q86WN1 690 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 DHX37Q8IY37 1157 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 CCDC155Q8N6L0 562 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 HERVK_113Q902F9 699 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 CUL5Q93034 780 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 TIFAQ96CG3 184 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 RRP36Q96EU6 259 aaKnown RBP10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 SCLYQ96I15 445 aa10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 TTYH1Q9H313 450 aaPredicted RBP10.34□□□□□ -0.75
NPLOC4-204ENST00000570324 RIOX1Q9H6W3 641 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms