RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 EEF2P13639 858 aaKnown RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 GCFC2P16383 781 aaKnown RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 SFPQP23246 707 aaKnown RBP eCLIP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 PBX1P40424 430 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 PPP1R2P41236 205 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 STAT6P42226 847 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 AMPD3Q01432 767 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 MAP3K10Q02779 954 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 SPAG1Q07617 926 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 PDE4CQ08493 712 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 TPD52L1Q16890 204 aaPredicted RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 CFAP100Q494V2 611 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 CCDC93Q567U6 631 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 DNTTIP2Q5QJE6 756 aaKnown RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 C6orf132Q5T0Z8 1188 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 JAKMIP3Q5VZ66 844 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 SLFN13Q68D06 897 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 SPECC1LQ69YQ0 1117 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 TTBK2Q6IQ55 1244 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 RSBN1LQ6PCB5 846 aaPredicted RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 FOXR2Q6PJQ5 311 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 MOXD1Q6UVY6 613 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 CABP7Q86V35 215 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 FCHSD1Q86WN1 690 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 ADSSL1Q8N142 457 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 LRRC47Q8N1G4 583 aaKnown RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 GIMAP8Q8ND71 665 aaPredicted RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 TBCKQ8TEA7 893 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 NOC3LQ8WTT2 800 aaKnown RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 FAM151AQ8WW52 585 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 CUL5Q93034 780 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 DHTKD1Q96HY7 919 aaPredicted RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 MMTAG2Q9BU76 263 aaKnown RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 PSTPIP2Q9H939 334 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 SAMSN1Q9NSI8 373 aaKnown RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 BIN2Q9UBW5 565 aaPredicted RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 ADD3Q9UEY8 706 aaKnown RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 HERC5Q9UII4 1024 aaKnown RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 COLQQ9Y215 455 aaPredicted RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 CD2APQ9Y5K6 639 aa6.06□□□□□ -1.44
SF3B3-213ENST00000569687 GOLGB1Q14789 3259 aaKnown RBP6.06□□□□□ -1.44
SF3B3-213ENST00000569687 FRMPD2Q68DX3 1309 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-213ENST00000569687 PVALEFA0A1B0GWK0 134 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 USP17L10C9JJH3 530 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 F5H6K3 240 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 PPIP5K2O43314 1243 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 STX10O60499 249 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 AP1G2O75843 785 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 FOSP01100 380 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-213ENST00000569687 TNNT1P13805 278 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 CASP1P29466 404 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 RBM5P52756 815 aaKnown RBP eCLIP6.05□□□□□ -1.44
SF3B3-213ENST00000569687 KLRC3Q07444 240 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 TRAF1Q13077 416 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 SEPT2Q15019 361 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 KARSQ15046 597 aaKnown RBP6.05□□□□□ -1.44
SF3B3-213ENST00000569687 SYCP1Q15431 976 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 QPCTQ16769 361 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 AOC3Q16853 763 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 ABCB5Q2M3G0 1257 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 TUSC1Q2TAM9 212 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 LETM2Q2VYF4 491 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 FILIP1LQ4L180 1135 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 HYIQ5T013 277 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 E4F1Q66K89 784 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-213ENST00000569687 ILDR2Q71H61 639 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 RASGRP2Q7LDG7 609 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 FAM83AQ86UY5 434 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 HOMER1Q86YM7 354 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 AGBL3Q8NEM8 1001 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 CRYGNQ8WXF5 182 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 COA7Q96BR5 231 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 ZBED3Q96IU2 234 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-213ENST00000569687 RAB34Q9BZG1 259 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 LRRC27Q9C0I9 530 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 THAP9Q9H5L6 903 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 TDRD3Q9H7E2 651 aaKnown RBP6.05□□□□□ -1.44
SF3B3-213ENST00000569687 PRM3Q9NNZ6 103 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 TMEM260Q9NX78 707 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 PIM2Q9P1W9 311 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 STK17AQ9UEE5 414 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 HDAC9Q9UKV0 1011 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 PCDHAC2Q9Y5I4 1007 aa6.05□□□□□ -1.44
SF3B3-213ENST00000569687 BAZ2BQ9UIF8 2168 aaKnown RBP6.05□□□□□ -1.44
SF3B3-213ENST00000569687 BRCA1P38398 1863 aaKnown RBP6.05□□□□□ -1.44
SF3B3-213ENST00000569687 ITIH6Q6UXX5 1313 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 GREB1LQ9C091 1923 aaPredicted RBP6.04□□□□□ -1.44
SF3B3-213ENST00000569687 UQCRHLA0A096LP55 91 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 PP2D1A8MPX8 630 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 TMEM232C9JQI7 657 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 PIK3CDO00329 1044 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 MPHOSPH10O00566 681 aaKnown RBP6.04□□□□□ -1.44
SF3B3-213ENST00000569687 SOCS7O14512 581 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 TBX3O15119 743 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 ARHGAP6O43182 974 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 CTIFO43310 598 aaKnown RBP6.04□□□□□ -1.44
SF3B3-213ENST00000569687 UQCRHP07919 91 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 PLCG1P19174 1290 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 CDC25AP30304 524 aa6.04□□□□□ -1.44
SF3B3-213ENST00000569687 SLC16A2P36021 539 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms