RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 OR6J1Q8NGC5 347 aa16.19■□□□□ 0.18
GTF3C1-211ENST00000569653 MTMR8Q96EF0 704 aa16.19■□□□□ 0.18
GTF3C1-211ENST00000569653 ALDH8A1Q9H2A2 487 aaPredicted RBP16.19■□□□□ 0.18
GTF3C1-211ENST00000569653 VAT1LQ9HCJ6 419 aa16.19■□□□□ 0.18
GTF3C1-211ENST00000569653 TRMT13Q9NUP7 481 aaKnown RBP16.19■□□□□ 0.18
GTF3C1-211ENST00000569653 CTNNA3Q9UI47 895 aa16.19■□□□□ 0.18
GTF3C1-211ENST00000569653 PTPRSQ13332 1948 aa16.19■□□□□ 0.18
GTF3C1-211ENST00000569653 RAD50Q92878 1312 aa16.19■□□□□ 0.18
GTF3C1-211ENST00000569653 TLR3O15455 904 aaKnown RBP16.18■□□□□ 0.18
GTF3C1-211ENST00000569653 PARP1P09874 1014 aaKnown RBP16.18■□□□□ 0.18
GTF3C1-211ENST00000569653 DNAJB2P25686 324 aa16.18■□□□□ 0.18
GTF3C1-211ENST00000569653 CCL23P55773 120 aa16.18■□□□□ 0.18
GTF3C1-211ENST00000569653 PPIGQ13427 754 aaKnown RBP eCLIP16.18■□□□□ 0.183e-7■■□□□ 13.2
GTF3C1-211ENST00000569653 GRIN2CQ14957 1233 aa16.18■□□□□ 0.18
GTF3C1-211ENST00000569653 DNERQ8NFT8 737 aa16.18■□□□□ 0.18
GTF3C1-211ENST00000569653 KRT23Q9C075 422 aa16.18■□□□□ 0.18
GTF3C1-211ENST00000569653 HIPK3Q9H422 1215 aa16.18■□□□□ 0.18
GTF3C1-211ENST00000569653 MAD2L2Q9UI95 211 aa16.18■□□□□ 0.18
GTF3C1-211ENST00000569653 ABCB11O95342 1321 aa16.18■□□□□ 0.18
GTF3C1-211ENST00000569653 DOCK5Q9H7D0 1870 aa16.17■□□□□ 0.18
GTF3C1-211ENST00000569653 A6NJR5 290 aa16.17■□□□□ 0.18
GTF3C1-211ENST00000569653 DLL1O00548 723 aa16.17■□□□□ 0.18
GTF3C1-211ENST00000569653 MYL3P08590 195 aa16.17■□□□□ 0.18
GTF3C1-211ENST00000569653 CYP2C9P11712 490 aa16.17■□□□□ 0.18
GTF3C1-211ENST00000569653 NT5C2P49902 561 aa16.17■□□□□ 0.18
GTF3C1-211ENST00000569653 ANTXR2P58335 489 aa16.17■□□□□ 0.18
GTF3C1-211ENST00000569653 CCDC178Q5BJE1 867 aa16.17■□□□□ 0.18
GTF3C1-211ENST00000569653 SCFD2Q8WU76 684 aa16.17■□□□□ 0.18
GTF3C1-211ENST00000569653 SCLYQ96I15 445 aa16.17■□□□□ 0.18
GTF3C1-211ENST00000569653 CTAGE1Q96RT6 745 aa16.17■□□□□ 0.18
GTF3C1-211ENST00000569653 UBAC1Q9BSL1 405 aa16.17■□□□□ 0.18
GTF3C1-211ENST00000569653 PBX4Q9BYU1 374 aa16.17■□□□□ 0.18
GTF3C1-211ENST00000569653 IL23AQ9NPF7 189 aa16.17■□□□□ 0.18
GTF3C1-211ENST00000569653 PNMA2Q9UL42 364 aa16.17■□□□□ 0.18
GTF3C1-211ENST00000569653 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.16■□□□□ 0.18
GTF3C1-211ENST00000569653 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.16■□□□□ 0.18
GTF3C1-211ENST00000569653 PALM3A6NDB9 673 aaPredicted RBP16.16■□□□□ 0.18
GTF3C1-211ENST00000569653 SGSM2O43147 1006 aa16.16■□□□□ 0.18
GTF3C1-211ENST00000569653 TXNP10599 105 aaKnown RBP16.16■□□□□ 0.18
GTF3C1-211ENST00000569653 ARHGAP1Q07960 439 aa16.16■□□□□ 0.18
GTF3C1-211ENST00000569653 PPP2R5BQ15173 497 aa16.16■□□□□ 0.18
GTF3C1-211ENST00000569653 IFIT1BQ5T764 474 aaKnown RBP16.16■□□□□ 0.18
GTF3C1-211ENST00000569653 CHST3Q7LGC8 479 aa16.16■□□□□ 0.18
GTF3C1-211ENST00000569653 SKAP1Q86WV1 359 aa16.16■□□□□ 0.18
GTF3C1-211ENST00000569653 TMEM199Q8N511 208 aa16.16■□□□□ 0.18
GTF3C1-211ENST00000569653 CNNM2Q9H8M5 875 aa16.16■□□□□ 0.18
GTF3C1-211ENST00000569653 KLRF2D3W0D1 207 aa16.15■□□□□ 0.18
GTF3C1-211ENST00000569653 CYTH3O43739 400 aa16.15■□□□□ 0.18
GTF3C1-211ENST00000569653 ZEB2O60315 1214 aa16.15■□□□□ 0.18
GTF3C1-211ENST00000569653 GHRHRQ02643 423 aa16.15■□□□□ 0.18
GTF3C1-211ENST00000569653 LY6KQ17RY6 165 aa16.15■□□□□ 0.18
GTF3C1-211ENST00000569653 NBPF20Q3BBV1 942 aa16.15■□□□□ 0.18
GTF3C1-211ENST00000569653 FBXO11Q86XK2 927 aa16.15■□□□□ 0.18
GTF3C1-211ENST00000569653 USP38Q8NB14 1042 aa16.15■□□□□ 0.18
GTF3C1-211ENST00000569653 IL31RAQ8NI17 732 aa16.15■□□□□ 0.18
GTF3C1-211ENST00000569653 HERVK_113Q902F9 699 aa16.15■□□□□ 0.18
GTF3C1-211ENST00000569653 TTC28Q96AY4 2481 aa16.15■□□□□ 0.18
GTF3C1-211ENST00000569653 MTG1Q9BT17 334 aaPredicted RBP16.15■□□□□ 0.18
GTF3C1-211ENST00000569653 GPHNQ9NQX3 736 aaPredicted RBP16.15■□□□□ 0.18
GTF3C1-211ENST00000569653 POLR3EQ9NVU0 708 aa16.15■□□□□ 0.18
GTF3C1-211ENST00000569653 TMEM265A0A087WTH1 108 aa16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 E7EWF7 191 aa16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 DHX16O60231 1041 aaKnown RBP16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 RGS20O76081 388 aa16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 EIF2AK2P19525 551 aaKnown RBP16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 CPT1AP50416 773 aa16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 HSD17B4P51659 736 aa16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 GRM4Q14833 912 aa16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 PSRC1Q6PGN9 363 aaPredicted RBP16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 SEPT14Q6ZU15 432 aa16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 MAFAQ8NHW3 353 aaPredicted RBP16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 AFG1LQ8WV93 481 aa16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 KAT2BQ92831 832 aa16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 TIFAQ96CG3 184 aa16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 RMDN3Q96TC7 470 aa16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 YBX2Q9Y2T7 364 aaKnown RBP16.14■□□□□ 0.17
GTF3C1-211ENST00000569653 NKRFO15226 690 aaKnown RBP eCLIP16.13■□□□□ 0.17
GTF3C1-211ENST00000569653 TROAPQ12815 778 aa16.13■□□□□ 0.17
GTF3C1-211ENST00000569653 OTOP2Q7RTS6 562 aa16.13■□□□□ 0.17
GTF3C1-211ENST00000569653 MB21D2Q8IYB1 491 aaPredicted RBP16.13■□□□□ 0.17
GTF3C1-211ENST00000569653 NSUN6Q8TEA1 469 aaKnown RBP16.13■□□□□ 0.17
GTF3C1-211ENST00000569653 PIGSQ96S52 555 aa16.13■□□□□ 0.17
GTF3C1-211ENST00000569653 ZNF576Q9H609 170 aa16.13■□□□□ 0.17
GTF3C1-211ENST00000569653 PXMP2Q9NR77 195 aa16.13■□□□□ 0.17
GTF3C1-211ENST00000569653 CFBP00751 764 aa16.12■□□□□ 0.17
GTF3C1-211ENST00000569653 MMP3P08254 477 aa16.12■□□□□ 0.17
GTF3C1-211ENST00000569653 FOSL2P15408 326 aa16.12■□□□□ 0.17
GTF3C1-211ENST00000569653 HOXA13P31271 388 aaPredicted RBP16.12■□□□□ 0.17
GTF3C1-211ENST00000569653 TTLL4Q14679 1199 aa16.12■□□□□ 0.17
GTF3C1-211ENST00000569653 GPKOWQ92917 476 aaPredicted RBP eCLIP16.12■□□□□ 0.17
GTF3C1-211ENST00000569653 MAP4K1Q92918 833 aa16.12■□□□□ 0.17
GTF3C1-211ENST00000569653 ZFP91Q96JP5 570 aaPredicted RBP16.12■□□□□ 0.17
GTF3C1-211ENST00000569653 AMNQ9BXJ7 453 aa16.12■□□□□ 0.17
GTF3C1-211ENST00000569653 COL25A1Q9BXS0 654 aaPredicted RBP16.12■□□□□ 0.17
GTF3C1-211ENST00000569653 SEZ6LQ9BYH1 1024 aa16.12■□□□□ 0.17
GTF3C1-211ENST00000569653 RIOX1Q9H6W3 641 aa16.12■□□□□ 0.17
GTF3C1-211ENST00000569653 DDX41Q9UJV9 622 aaKnown RBP16.12■□□□□ 0.17
GTF3C1-211ENST00000569653 MRPL11Q9Y3B7 192 aaKnown RBP16.12■□□□□ 0.17
GTF3C1-211ENST00000569653 IFIT3O14879 490 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms