RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 ASB14A6NK59 587 aa13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 CABYRO75952 493 aa13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 ICAM1P05362 532 aa13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 PDE4BQ07343 736 aa13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 RAB30Q15771 203 aa13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 CCDC85BQ15834 202 aaPredicted RBP13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 RCSD1Q6JBY9 416 aa13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 SPRED2Q7Z698 418 aa13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 ADAMTS19Q8TE59 1207 aa13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 ATXN2LQ8WWM7 1075 aaKnown RBP13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 CLEC4DQ8WXI8 215 aa13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 NECAB3Q96P71 396 aaPredicted RBP13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 CTAGE1Q96RT6 745 aa13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 GAS2L1Q99501 681 aaPredicted RBP13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 ZNF287Q9HBT7 754 aa13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 VTA1Q9NP79 307 aa13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 ANAPC4Q9UJX5 808 aa13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 STX8Q9UNK0 236 aa13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 CTDP1Q9Y5B0 961 aaPredicted RBP13.19□□□□□ -0.3
CHRFAM7A-206ENST00000569278 LAMA4Q16363 1823 aa13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 RBM47A0AV96 593 aaKnown RBP13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 FGBP02675 491 aa13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 CYP2C9P11712 490 aa13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 SLC16A2P36021 539 aa13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 ALDH5A1P51649 535 aaPredicted RBP13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 PURAQ00577 322 aaKnown RBP13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 BAATQ14032 418 aaPredicted RBP13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 DUSP28Q4G0W2 176 aa13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 BTNL9Q6UXG8 535 aa13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 NSMFQ6X4W1 530 aa13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 NOL8Q76FK4 1167 aaKnown RBP13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 CHURC1Q8WUH1 139 aa13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 GPATCH3Q96I76 525 aa13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 FSD1Q9BTV5 496 aa13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 CCPG1Q9ULG6 757 aa13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 Q9Y3F1 56 aa13.18□□□□□ -0.3
CHRFAM7A-206ENST00000569278 ORC4O43929 436 aa13.17□□□□□ -0.3
CHRFAM7A-206ENST00000569278 COL9A1P20849 921 aa13.17□□□□□ -0.3
CHRFAM7A-206ENST00000569278 EDNRBP24530 442 aa13.17□□□□□ -0.3
CHRFAM7A-206ENST00000569278 TFF2Q03403 129 aa13.17□□□□□ -0.3
CHRFAM7A-206ENST00000569278 IQSEC1Q6DN90 963 aa13.17□□□□□ -0.3
CHRFAM7A-206ENST00000569278 CHD1LQ86WJ1 897 aa13.17□□□□□ -0.3
CHRFAM7A-206ENST00000569278 IPO9Q96P70 1041 aaKnown RBP13.17□□□□□ -0.3
CHRFAM7A-206ENST00000569278 NACAP1Q9BZK3 213 aa13.17□□□□□ -0.3
CHRFAM7A-206ENST00000569278 UPF2Q9HAU5 1272 aaKnown RBP13.17□□□□□ -0.3
CHRFAM7A-206ENST00000569278 ISY1Q9ULR0 285 aaKnown RBP13.17□□□□□ -0.3
CHRFAM7A-206ENST00000569278 TNKSO95271 1327 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 FRMPD2Q68DX3 1309 aaPredicted RBP13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 A0A0D9SFI3 127 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 TSPY2A6NKD2 308 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 RFXAPO00287 272 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 ARIH2O95376 493 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 MX1P20591 662 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 IKQ13123 557 aaPredicted RBP13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 GPNMBQ14956 572 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 KRT40Q6A162 431 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 KIAA1211Q6ZU35 1233 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 DCAF4Q8WV16 495 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 COPS5Q92905 334 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 TMEM47Q9BQJ4 181 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 AP5M1Q9H0R1 490 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 MSRAQ9UJ68 235 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 PCDHA11Q9Y5I1 949 aa13.16□□□□□ -0.3
CHRFAM7A-206ENST00000569278 CA3P07451 260 aa13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 SNHG28P0DPA3 235 aa13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 PDHBP11177 359 aa13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 BMP1P13497 986 aa13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 IGFBP4P22692 258 aa13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 KCNQ1P51787 676 aa13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 CCDC96Q2M329 555 aa13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 TCTN1Q2MV58 587 aa13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 SYDE2Q5VT97 1194 aa13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 PPP2R2DQ66LE6 453 aa13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 ZNF589Q86UQ0 364 aaPredicted RBP13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 FAM227BQ96M60 508 aa13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 UHRF1Q96T88 793 aaPredicted RBP13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 WDR11Q9BZH6 1224 aa13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 SLC28A3Q9HAS3 691 aa13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 SLC4A7Q9Y6M7 1214 aa13.15□□□□□ -0.3
CHRFAM7A-206ENST00000569278 BRWD1Q9NSI6 2320 aa13.14□□□□□ -0.31
CHRFAM7A-206ENST00000569278 RANBP6O60518 1105 aaKnown RBP13.14□□□□□ -0.31
CHRFAM7A-206ENST00000569278 ATP2A2P16615 1042 aaKnown RBP13.14□□□□□ -0.31
CHRFAM7A-206ENST00000569278 MRPS5P82675 430 aaKnown RBP13.14□□□□□ -0.31
CHRFAM7A-206ENST00000569278 ALX1Q15699 326 aa13.14□□□□□ -0.31
CHRFAM7A-206ENST00000569278 TBC1D10CQ8IV04 446 aa13.14□□□□□ -0.31
CHRFAM7A-206ENST00000569278 SEZ6LQ9BYH1 1024 aa13.14□□□□□ -0.31
CHRFAM7A-206ENST00000569278 MTCH2Q9Y6C9 303 aa13.14□□□□□ -0.31
CHRFAM7A-206ENST00000569278 TRIP12Q14669 1992 aaPredicted RBP13.14□□□□□ -0.31
CHRFAM7A-206ENST00000569278 KIAA1217Q5T5P2 1943 aa13.13□□□□□ -0.31
CHRFAM7A-206ENST00000569278 LPXNO60711 386 aa13.13□□□□□ -0.31
CHRFAM7A-206ENST00000569278 SLC3A2P08195 630 aaKnown RBP13.13□□□□□ -0.31
CHRFAM7A-206ENST00000569278 POU3F3P20264 500 aaPredicted RBP13.13□□□□□ -0.31
CHRFAM7A-206ENST00000569278 RPS6P62753 249 aaKnown RBP13.13□□□□□ -0.31
CHRFAM7A-206ENST00000569278 NBPF20Q3BBV1 942 aa13.13□□□□□ -0.31
CHRFAM7A-206ENST00000569278 C8orf34Q49A92 452 aa13.13□□□□□ -0.31
CHRFAM7A-206ENST00000569278 DEFB128Q7Z7B8 93 aa13.13□□□□□ -0.31
CHRFAM7A-206ENST00000569278 OR6J1Q8NGC5 347 aa13.13□□□□□ -0.31
CHRFAM7A-206ENST00000569278 DHX38Q92620 1227 aaKnown RBP13.13□□□□□ -0.31
CHRFAM7A-206ENST00000569278 MTIF3Q9H2K0 278 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms