RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 HOXA10P31260 410 aaPredicted RBP7.87□□□□□ -1.15
UBR1-208ENST00000569066 FLT3P36888 993 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 DNM2P50570 870 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 TTF1Q15361 905 aaPredicted RBP7.87□□□□□ -1.15
UBR1-208ENST00000569066 WAPLQ7Z5K2 1190 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 NLRP10Q86W26 655 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 NAT16Q8N8M0 369 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.87□□□□□ -1.15
UBR1-208ENST00000569066 USP7Q93009 1102 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 TTC1Q99614 292 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 KCNJ15Q99712 375 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 ZFYVE21Q9BQ24 234 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 METTL22Q9BUU2 404 aaPredicted RBP7.87□□□□□ -1.15
UBR1-208ENST00000569066 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.87□□□□□ -1.15
UBR1-208ENST00000569066 SLC5A4Q9NY91 659 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 CBLCQ9ULV8 474 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 CCDC66A2RUB6 948 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 CYP26A1O43174 497 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 PMLP29590 882 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 CLCN7P51798 805 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 ITKQ08881 620 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 LRRC41Q15345 812 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 TMEM177Q53S58 311 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 DDX53Q86TM3 631 aaKnown RBP7.87□□□□□ -1.15
UBR1-208ENST00000569066 DPF3Q92784 378 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 CHAMP1Q96JM3 812 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 GPR101Q96P66 508 aaPredicted RBP7.87□□□□□ -1.15
UBR1-208ENST00000569066 ALG1Q9BT22 464 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 JAM3Q9BX67 310 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 VTA1Q9NP79 307 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 ATG3Q9NT62 314 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 EBF1Q9UH73 591 aa7.87□□□□□ -1.15
UBR1-208ENST00000569066 KCNK3O14649 394 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 IGLV1-40P01703 118 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 BPIP17213 487 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 FSTP19883 344 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 FPR2P25090 351 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 BCL6P41182 706 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 SMC1BQ8NDV3 1235 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 MMP19Q99542 508 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 B4E1Z4 1266 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 RNF225M0QZC1 329 aaPredicted RBP7.86□□□□□ -1.15
UBR1-208ENST00000569066 NPTXRO95502 500 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 F2P00734 622 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 SCNN1BP51168 640 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 KIZQ2M2Z5 673 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 FSTL4Q6MZW2 842 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 ZDHHC13Q8IUH4 622 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 NETO1Q8TDF5 533 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 IFT22Q9H7X7 185 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 MKNK2Q9HBH9 465 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 THG1LQ9NWX6 298 aaKnown RBP7.86□□□□□ -1.15
UBR1-208ENST00000569066 GULP1Q9UBP9 304 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 FBLN5Q9UBX5 448 aa7.86□□□□□ -1.15
UBR1-208ENST00000569066 GRK2P25098 689 aa7.85□□□□□ -1.15
UBR1-208ENST00000569066 GRK3P35626 688 aa7.85□□□□□ -1.15
UBR1-208ENST00000569066 IL2P60568 153 aa7.85□□□□□ -1.15
UBR1-208ENST00000569066 IFI16Q16666 785 aaKnown RBP7.85□□□□□ -1.15
UBR1-208ENST00000569066 THAP5Q7Z6K1 395 aa7.85□□□□□ -1.15
UBR1-208ENST00000569066 CNTD1Q8N815 330 aa7.85□□□□□ -1.15
UBR1-208ENST00000569066 OR2W6PQ8NHA6 318 aa7.85□□□□□ -1.15
UBR1-208ENST00000569066 CELF4Q9BZC1 486 aaKnown RBP7.85□□□□□ -1.15
UBR1-208ENST00000569066 SPTLC3Q9NUV7 552 aa7.85□□□□□ -1.15
UBR1-208ENST00000569066 RASSF7Q02833 373 aa7.85□□□□□ -1.15
UBR1-208ENST00000569066 RNF111Q6ZNA4 994 aa7.85□□□□□ -1.15
UBR1-208ENST00000569066 OVCH1Q7RTY7 1134 aa7.85□□□□□ -1.15
UBR1-208ENST00000569066 TEX2Q8IWB9 1127 aa7.85□□□□□ -1.15
UBR1-208ENST00000569066 PRR19A6NJB7 356 aa7.84□□□□□ -1.15
UBR1-208ENST00000569066 PPP1R11O60927 126 aaPredicted RBP7.84□□□□□ -1.15
UBR1-208ENST00000569066 CPEP16870 476 aa7.84□□□□□ -1.15
UBR1-208ENST00000569066 CHTF18Q8WVB6 975 aa7.84□□□□□ -1.15
UBR1-208ENST00000569066 TRHDEQ9UKU6 1024 aa7.84□□□□□ -1.15
UBR1-208ENST00000569066 FKBP9O95302 570 aa7.83□□□□□ -1.16
UBR1-208ENST00000569066 ATP2A2P16615 1042 aaKnown RBP7.83□□□□□ -1.16
UBR1-208ENST00000569066 MECP2P51608 486 aaKnown RBP7.83□□□□□ -1.16
UBR1-208ENST00000569066 MCL1Q07820 350 aa7.83□□□□□ -1.16
UBR1-208ENST00000569066 RNF219Q5W0B1 726 aaPredicted RBP7.83□□□□□ -1.16
UBR1-208ENST00000569066 FKBP9P1Q75LS8 142 aa7.83□□□□□ -1.16
UBR1-208ENST00000569066 SPATS2Q86XZ4 545 aaKnown RBP7.83□□□□□ -1.16
UBR1-208ENST00000569066 BRINP1O60477 761 aa7.83□□□□□ -1.16
UBR1-208ENST00000569066 TGFB1P01137 390 aa7.83□□□□□ -1.16
UBR1-208ENST00000569066 PDE6AP16499 860 aa7.83□□□□□ -1.16
UBR1-208ENST00000569066 YBX3P16989 372 aaKnown RBP eCLIP7.83□□□□□ -1.16
UBR1-208ENST00000569066 CHST14Q8NCH0 376 aa7.83□□□□□ -1.16
UBR1-208ENST00000569066 EMC7Q9NPA0 242 aa7.83□□□□□ -1.16
UBR1-208ENST00000569066 CLDND1Q9NY35 253 aa7.83□□□□□ -1.16
UBR1-208ENST00000569066 PIM2Q9P1W9 311 aa7.83□□□□□ -1.16
UBR1-208ENST00000569066 FAN1Q9Y2M0 1017 aa7.83□□□□□ -1.16
UBR1-208ENST00000569066 PTPDC1A2A3K4 754 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 GABRDO14764 452 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 CREB3L3Q68CJ9 461 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 NECAB2Q7Z6G3 386 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 ORAI3Q9BRQ5 295 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 YIPF4Q9BSR8 244 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 G6PC3Q9BUM1 346 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 CATSPERZQ9NTU4 200 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 MARCH2Q9P0N8 246 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 GAS7O60861 476 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 PRKD3O94806 890 aa7.82□□□□□ -1.16
UBR1-208ENST00000569066 TBC1D8O95759 1140 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms