RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 KLRF2D3W0D1 207 aa22.04■■□□□ 1.12
SPSB3-210ENST00000568416 ARIH2O95376 493 aa22.04■■□□□ 1.12
SPSB3-210ENST00000568416 ACRP10323 421 aa22.04■■□□□ 1.12
SPSB3-210ENST00000568416 TXNP10599 105 aaKnown RBP22.04■■□□□ 1.12
SPSB3-210ENST00000568416 PSRC1Q6PGN9 363 aaPredicted RBP22.04■■□□□ 1.12
SPSB3-210ENST00000568416 ZNF365Q70YC5 407 aa22.04■■□□□ 1.12
SPSB3-210ENST00000568416 NSUN6Q8TEA1 469 aaKnown RBP22.04■■□□□ 1.12
SPSB3-210ENST00000568416 MTG1Q9BT17 334 aaPredicted RBP22.04■■□□□ 1.12
SPSB3-210ENST00000568416 NOC4LQ9BVI4 516 aaKnown RBP22.04■■□□□ 1.12
SPSB3-210ENST00000568416 ALDH8A1Q9H2A2 487 aaPredicted RBP22.04■■□□□ 1.12
SPSB3-210ENST00000568416 IL23AQ9NPF7 189 aa22.04■■□□□ 1.12
SPSB3-210ENST00000568416 TAF6LQ9Y6J9 622 aa22.04■■□□□ 1.12
SPSB3-210ENST00000568416 GHRHRQ02643 423 aa22.03■■□□□ 1.12
SPSB3-210ENST00000568416 TTLL4Q14679 1199 aa22.03■■□□□ 1.12
SPSB3-210ENST00000568416 BRDTQ58F21 947 aaPredicted RBP22.03■■□□□ 1.12
SPSB3-210ENST00000568416 CCDC62Q6P9F0 684 aa22.03■■□□□ 1.12
SPSB3-210ENST00000568416 AMNQ9BXJ7 453 aa22.03■■□□□ 1.12
SPSB3-210ENST00000568416 E7EWF7 191 aa22.02■■□□□ 1.12
SPSB3-210ENST00000568416 OPLAHO14841 1288 aa22.02■■□□□ 1.12
SPSB3-210ENST00000568416 PPP1R11O60927 126 aaPredicted RBP22.02■■□□□ 1.12
SPSB3-210ENST00000568416 STOX1Q6ZVD7 989 aa22.02■■□□□ 1.12
SPSB3-210ENST00000568416 IWS1Q96ST2 819 aa22.02■■□□□ 1.12
SPSB3-210ENST00000568416 RMDN3Q96TC7 470 aa22.02■■□□□ 1.12
SPSB3-210ENST00000568416 WNT8AQ9H1J5 351 aa22.02■■□□□ 1.12
SPSB3-210ENST00000568416 GPHNQ9NQX3 736 aaPredicted RBP22.02■■□□□ 1.12
SPSB3-210ENST00000568416 IFIT3O14879 490 aaKnown RBP22.01■■□□□ 1.11
SPSB3-210ENST00000568416 ZBTB5O15062 677 aa22.01■■□□□ 1.11
SPSB3-210ENST00000568416 KPNA6O60684 536 aa22.01■■□□□ 1.11
SPSB3-210ENST00000568416 DNAJB2P25686 324 aa22.01■■□□□ 1.11
SPSB3-210ENST00000568416 HSD17B4P51659 736 aa22.01■■□□□ 1.11
SPSB3-210ENST00000568416 CCL23P55773 120 aa22.01■■□□□ 1.11
SPSB3-210ENST00000568416 GRM4Q14833 912 aa22.01■■□□□ 1.11
SPSB3-210ENST00000568416 STXBP2Q15833 593 aa22.01■■□□□ 1.11
SPSB3-210ENST00000568416 SLC35G1Q2M3R5 365 aa22.01■■□□□ 1.11
SPSB3-210ENST00000568416 NCOA7Q8NI08 942 aa22.01■■□□□ 1.11
SPSB3-210ENST00000568416 HERVK_113Q902F9 699 aa22.01■■□□□ 1.11
SPSB3-210ENST00000568416 MAP4K1Q92918 833 aa22.01■■□□□ 1.11
SPSB3-210ENST00000568416 SENP2Q9HC62 589 aa22.01■■□□□ 1.11
SPSB3-210ENST00000568416 TRMT13Q9NUP7 481 aaKnown RBP22.01■■□□□ 1.11
SPSB3-210ENST00000568416 CFBP00751 764 aa22■■□□□ 1.11
SPSB3-210ENST00000568416 SUPT20HL2P0C7V6 817 aa22■■□□□ 1.11
SPSB3-210ENST00000568416 NBPF20Q3BBV1 942 aa22■■□□□ 1.11
SPSB3-210ENST00000568416 RALYLQ86SE5 291 aaKnown RBP22■■□□□ 1.11
SPSB3-210ENST00000568416 MYLIPQ8WY64 445 aa22■■□□□ 1.11
SPSB3-210ENST00000568416 RIOX1Q9H6W3 641 aa22■■□□□ 1.11
SPSB3-210ENST00000568416 ERICH2A1L162 156 aa21.99■■□□□ 1.11
SPSB3-210ENST00000568416 FGBP02675 491 aa21.99■■□□□ 1.11
SPSB3-210ENST00000568416 EIF2AK2P19525 551 aaKnown RBP21.99■■□□□ 1.11
SPSB3-210ENST00000568416 TROAPQ12815 778 aa21.99■■□□□ 1.11
SPSB3-210ENST00000568416 WTAPQ15007 396 aa21.99■■□□□ 1.11
SPSB3-210ENST00000568416 LY6KQ17RY6 165 aa21.99■■□□□ 1.11
SPSB3-210ENST00000568416 ARHGEF16Q5VV41 709 aa21.99■■□□□ 1.11
SPSB3-210ENST00000568416 SEPT14Q6ZU15 432 aa21.99■■□□□ 1.11
SPSB3-210ENST00000568416 PXMP2Q9NR77 195 aa21.99■■□□□ 1.11
SPSB3-210ENST00000568416 MAP3K20Q9NYL2 800 aaKnown RBP21.99■■□□□ 1.11
SPSB3-210ENST00000568416 GRXCR1A8MXD5 290 aa21.98■■□□□ 1.11
SPSB3-210ENST00000568416 GH1P01241 217 aa21.98■■□□□ 1.11
SPSB3-210ENST00000568416 CYP2C9P11712 490 aa21.98■■□□□ 1.11
SPSB3-210ENST00000568416 ANTXR2P58335 489 aa21.98■■□□□ 1.11
SPSB3-210ENST00000568416 PTPN11Q06124 597 aaPredicted RBP21.98■■□□□ 1.11
SPSB3-210ENST00000568416 ARHGAP1Q07960 439 aa21.98■■□□□ 1.11
SPSB3-210ENST00000568416 NFRKBQ6P4R8 1299 aa21.98■■□□□ 1.11
SPSB3-210ENST00000568416 CHST3Q7LGC8 479 aa21.98■■□□□ 1.11
SPSB3-210ENST00000568416 MB21D2Q8IYB1 491 aaPredicted RBP21.98■■□□□ 1.11
SPSB3-210ENST00000568416 TIFAQ96CG3 184 aa21.98■■□□□ 1.11
SPSB3-210ENST00000568416 VWCEQ96DN2 955 aa21.98■■□□□ 1.11
SPSB3-210ENST00000568416 PCDHA1Q9Y5I3 950 aa21.98■■□□□ 1.11
SPSB3-210ENST00000568416 RBM8AQ9Y5S9 174 aaKnown RBP21.98■■□□□ 1.11
SPSB3-210ENST00000568416 COL6A3P12111 3177 aa21.97■■□□□ 1.11
SPSB3-210ENST00000568416 DLL1O00548 723 aa21.97■■□□□ 1.11
SPSB3-210ENST00000568416 CYTH3O43739 400 aa21.97■■□□□ 1.11
SPSB3-210ENST00000568416 EIF3JO75822 258 aaKnown RBP21.97■■□□□ 1.11
SPSB3-210ENST00000568416 NR3C2P08235 984 aa21.97■■□□□ 1.11
SPSB3-210ENST00000568416 MMP3P08254 477 aa21.97■■□□□ 1.11
SPSB3-210ENST00000568416 SART3Q15020 963 aaKnown RBP21.97■■□□□ 1.11
SPSB3-210ENST00000568416 HOMER1Q86YM7 354 aa21.97■■□□□ 1.11
SPSB3-210ENST00000568416 SAMD3Q8N6K7 520 aa21.97■■□□□ 1.11
SPSB3-210ENST00000568416 PPP1R13LQ8WUF5 828 aa21.97■■□□□ 1.11
SPSB3-210ENST00000568416 AFG1LQ8WV93 481 aa21.97■■□□□ 1.11
SPSB3-210ENST00000568416 SCLYQ96I15 445 aa21.97■■□□□ 1.11
SPSB3-210ENST00000568416 PIGSQ96S52 555 aa21.97■■□□□ 1.11
SPSB3-210ENST00000568416 PBX4Q9BYU1 374 aa21.97■■□□□ 1.11
SPSB3-210ENST00000568416 CXXC1Q9P0U4 656 aaPredicted RBP21.97■■□□□ 1.11
SPSB3-210ENST00000568416 DDX41Q9UJV9 622 aaKnown RBP21.97■■□□□ 1.11
SPSB3-210ENST00000568416 PBX2P40425 430 aa21.96■■□□□ 1.11
SPSB3-210ENST00000568416 GRIN2CQ14957 1233 aa21.96■■□□□ 1.11
SPSB3-210ENST00000568416 FAM47CQ5HY64 1035 aa21.96■■□□□ 1.11
SPSB3-210ENST00000568416 TMEM67Q5HYA8 995 aa21.96■■□□□ 1.11
SPSB3-210ENST00000568416 IGDCC4Q8TDY8 1250 aa21.96■■□□□ 1.11
SPSB3-210ENST00000568416 PDCD2LQ9BRP1 358 aa21.96■■□□□ 1.11
SPSB3-210ENST00000568416 MTIF3Q9H2K0 278 aaKnown RBP21.96■■□□□ 1.11
SPSB3-210ENST00000568416 ZNF576Q9H609 170 aa21.96■■□□□ 1.11
SPSB3-210ENST00000568416 FOSL2P15408 326 aa21.95■■□□□ 1.1
SPSB3-210ENST00000568416 TRAF1Q13077 416 aa21.95■■□□□ 1.1
SPSB3-210ENST00000568416 OTOP2Q7RTS6 562 aa21.95■■□□□ 1.1
SPSB3-210ENST00000568416 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.95■■□□□ 1.1
SPSB3-210ENST00000568416 RPUSD2Q8IZ73 545 aaKnown RBP21.95■■□□□ 1.1
SPSB3-210ENST00000568416 MAFAQ8NHW3 353 aaPredicted RBP21.95■■□□□ 1.1
SPSB3-210ENST00000568416 RGS20O76081 388 aa21.94■■□□□ 1.1
SPSB3-210ENST00000568416 CATIPQ7Z7H3 387 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms