RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 PDE4DQ08499 809 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 TCP11X2Q5H9J9 407 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 FAM83AQ86UY5 434 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 SPICE1Q8N0Z3 855 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 ANKRD20A12PQ8NF67 263 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 MTFR1LQ9H019 292 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 TMX2Q9Y320 296 aa20.34■□□□□ 0.85
SMPD3-211ENST00000568373 CYP3A7-CYP3A51PA0A087WV96 503 aa20.33■□□□□ 0.85
SMPD3-211ENST00000568373 KCNJ18B7U540 433 aa20.33■□□□□ 0.85
SMPD3-211ENST00000568373 MARCH6O60337 910 aa20.33■□□□□ 0.85
SMPD3-211ENST00000568373 TBC1D12O60347 775 aa20.33■□□□□ 0.85
SMPD3-211ENST00000568373 CYP3A7P24462 503 aa20.33■□□□□ 0.85
SMPD3-211ENST00000568373 KCNJ12Q14500 433 aa20.33■□□□□ 0.85
SMPD3-211ENST00000568373 USH1GQ495M9 461 aa20.33■□□□□ 0.85
SMPD3-211ENST00000568373 LARP4BQ92615 738 aaKnown RBP20.33■□□□□ 0.85
SMPD3-211ENST00000568373 DHTKD1Q96HY7 919 aaPredicted RBP20.33■□□□□ 0.85
SMPD3-211ENST00000568373 PCDHA12Q9UN75 941 aa20.33■□□□□ 0.85
SMPD3-211ENST00000568373 TRIM49BA6NDI0 452 aa20.33■□□□□ 0.84
SMPD3-211ENST00000568373 KIF2AO00139 706 aaPredicted RBP20.33■□□□□ 0.84
SMPD3-211ENST00000568373 ARHGAP6O43182 974 aa20.33■□□□□ 0.84
SMPD3-211ENST00000568373 CCP110O43303 1012 aa20.33■□□□□ 0.84
SMPD3-211ENST00000568373 CCT6AP40227 531 aaKnown RBP20.33■□□□□ 0.84
SMPD3-211ENST00000568373 PMS1P54277 932 aaKnown RBP20.33■□□□□ 0.84
SMPD3-211ENST00000568373 ADKP55263 362 aaKnown RBP20.33■□□□□ 0.84
SMPD3-211ENST00000568373 TMEM119Q4V9L6 283 aa20.33■□□□□ 0.84
SMPD3-211ENST00000568373 MOXD1Q6UVY6 613 aa20.33■□□□□ 0.84
SMPD3-211ENST00000568373 FCHSD1Q86WN1 690 aa20.33■□□□□ 0.84
SMPD3-211ENST00000568373 ACER1Q8TDN7 264 aa20.33■□□□□ 0.84
SMPD3-211ENST00000568373 CRYGNQ8WXF5 182 aa20.33■□□□□ 0.84
SMPD3-211ENST00000568373 MBOAT7Q96N66 472 aa20.33■□□□□ 0.84
SMPD3-211ENST00000568373 BAG1Q99933 345 aaPredicted RBP20.33■□□□□ 0.84
SMPD3-211ENST00000568373 NUDT12Q9BQG2 462 aa20.33■□□□□ 0.84
SMPD3-211ENST00000568373 TMEM39BQ9GZU3 492 aa20.33■□□□□ 0.84
SMPD3-211ENST00000568373 GOPCQ9HD26 462 aa20.33■□□□□ 0.84
SMPD3-211ENST00000568373 PRR12Q9ULL5 1215 aa20.33■□□□□ 0.84
SMPD3-211ENST00000568373 MMP14P50281 582 aa20.32■□□□□ 0.84
SMPD3-211ENST00000568373 STAT2P52630 851 aa20.32■□□□□ 0.84
SMPD3-211ENST00000568373 COPB1P53618 953 aaKnown RBP20.32■□□□□ 0.84
SMPD3-211ENST00000568373 MCM6Q14566 821 aa20.32■□□□□ 0.84
SMPD3-211ENST00000568373 RAD54LQ92698 747 aa20.32■□□□□ 0.84
SMPD3-211ENST00000568373 ZBED3Q96IU2 234 aaPredicted RBP20.32■□□□□ 0.84
SMPD3-211ENST00000568373 ITIH6Q6UXX5 1313 aa20.32■□□□□ 0.84
SMPD3-211ENST00000568373 N4BP3O15049 544 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 STX10O60499 249 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 PPP1R2P41236 205 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 TTI2Q6NXR4 508 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 CNNM4Q6P4Q7 775 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 IRF2BP1Q8IU81 584 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 CDAN1Q8IWY9 1227 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 P2RX7Q99572 595 aaKnown RBP20.31■□□□□ 0.84
SMPD3-211ENST00000568373 KCNMB3Q9NPA1 279 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 MYMKA6NI61 221 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 AKR1B15C9JRZ8 316 aaPredicted RBP20.31■□□□□ 0.84
SMPD3-211ENST00000568373 FOSP01100 380 aaPredicted RBP20.31■□□□□ 0.84
SMPD3-211ENST00000568373 ARHGAP4P98171 946 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 STK4Q13043 487 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 DALRD3Q5D0E6 543 aaKnown RBP20.31■□□□□ 0.84
SMPD3-211ENST00000568373 KIAA1755Q5JYT7 1200 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 PPFIBP1Q86W92 1011 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 ZNF592Q92610 1267 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 GJA10Q969M2 543 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 TAOK3Q9H2K8 898 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 THAP9Q9H5L6 903 aa20.31■□□□□ 0.84
SMPD3-211ENST00000568373 FER1L6Q2WGJ9 1857 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 COBLL1Q53SF7 1204 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 CIAPIN1Q6FI81 312 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 TRIM47Q96LD4 638 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 PANX2Q96RD6 677 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 TAB2Q9NYJ8 693 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 PVALEFA0A1B0GWK0 134 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 SPDYE3A6NKU9 549 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 WNT10BO00744 389 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 FCER1AP12319 257 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 PTGER2P43116 358 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 UNC13DQ70J99 1090 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 KCNK18Q7Z418 384 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 NOC3LQ8WTT2 800 aaKnown RBP20.3■□□□□ 0.84
SMPD3-211ENST00000568373 SGIP1Q9BQI5 828 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 LRRC27Q9C0I9 530 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 VPS16Q9H269 839 aa20.3■□□□□ 0.84
SMPD3-211ENST00000568373 PPP1R1BQ9UD71 204 aaPredicted RBP20.3■□□□□ 0.84
SMPD3-211ENST00000568373 BICDL2A1A5D9 508 aa20.29■□□□□ 0.84
SMPD3-211ENST00000568373 OPLAHO14841 1288 aa20.29■□□□□ 0.84
SMPD3-211ENST00000568373 CCNE1P24864 410 aa20.29■□□□□ 0.84
SMPD3-211ENST00000568373 EEF1GP26641 437 aaKnown RBP20.29■□□□□ 0.84
SMPD3-211ENST00000568373 SREBF1P36956 1147 aa20.29■□□□□ 0.84
SMPD3-211ENST00000568373 RBL2Q08999 1139 aa20.29■□□□□ 0.84
SMPD3-211ENST00000568373 NBPF9Q3BBW0 867 aa20.29■□□□□ 0.84
SMPD3-211ENST00000568373 HYIQ5T013 277 aa20.29■□□□□ 0.84
SMPD3-211ENST00000568373 FAM83BQ5T0W9 1011 aa20.29■□□□□ 0.84
SMPD3-211ENST00000568373 MIGA2Q7L4E1 593 aa20.29■□□□□ 0.84
SMPD3-211ENST00000568373 SLFN12Q8IYM2 578 aa20.29■□□□□ 0.84
SMPD3-211ENST00000568373 JDP2Q8WYK2 163 aa20.29■□□□□ 0.84
SMPD3-211ENST00000568373 P2RX5Q93086 422 aa20.29■□□□□ 0.84
SMPD3-211ENST00000568373 PGAP2Q9UHJ9 254 aa20.29■□□□□ 0.84
SMPD3-211ENST00000568373 KDM3AQ9Y4C1 1321 aa20.29■□□□□ 0.84
SMPD3-211ENST00000568373 BRCA1P38398 1863 aaKnown RBP20.29■□□□□ 0.84
SMPD3-211ENST00000568373 CAP2P40123 477 aa20.28■□□□□ 0.84
SMPD3-211ENST00000568373 TRAF1Q13077 416 aa20.28■□□□□ 0.84
SMPD3-211ENST00000568373 ECM1Q16610 540 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms