RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 KCNA10Q16322 511 aa11.04□□□□□ -0.64
SF3B3-211ENST00000568291 RNF20Q5VTR2 975 aa11.04□□□□□ -0.64
SF3B3-211ENST00000568291 ANKRD33Q7Z3H0 272 aa11.04□□□□□ -0.64
SF3B3-211ENST00000568291 SRBD1Q8N5C6 995 aaKnown RBP11.04□□□□□ -0.64
SF3B3-211ENST00000568291 KLHDC9Q8NEP7 349 aa11.04□□□□□ -0.64
SF3B3-211ENST00000568291 JAKMIP1Q96N16 626 aaKnown RBP11.04□□□□□ -0.64
SF3B3-211ENST00000568291 LARP6Q9BRS8 491 aaKnown RBP11.04□□□□□ -0.64
SF3B3-211ENST00000568291 ABHD16BQ9H3Z7 469 aa11.04□□□□□ -0.64
SF3B3-211ENST00000568291 NAP1L2Q9ULW6 460 aaPredicted RBP11.04□□□□□ -0.64
SF3B3-211ENST00000568291 PCDHA1Q9Y5I3 950 aa11.04□□□□□ -0.64
SF3B3-211ENST00000568291 SNX14Q9Y5W7 946 aa11.04□□□□□ -0.64
SF3B3-211ENST00000568291 TTC28Q96AY4 2481 aa11.04□□□□□ -0.64
SF3B3-211ENST00000568291 MROH7Q68CQ1 1323 aa11.04□□□□□ -0.64
SF3B3-211ENST00000568291 UNC80Q8N2C7 3258 aa11.04□□□□□ -0.64
SF3B3-211ENST00000568291 ASB14A6NK59 587 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 ZBTB5O15062 677 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 DYNC1LI2O43237 492 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-211ENST00000568291 PPFIA3O75145 1194 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 SMPD1P17405 629 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 DNAJB2P25686 324 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 ALDH5A1P51649 535 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-211ENST00000568291 TNFAIP2Q03169 654 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 MKRN4PQ13434 485 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-211ENST00000568291 CCSAPQ6IQ19 270 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-211ENST00000568291 TAPT1Q6NXT6 567 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 MICU3Q86XE3 530 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 SYTL5Q8TDW5 730 aaPredicted RBP11.03□□□□□ -0.64
SF3B3-211ENST00000568291 PPP1R13LQ8WUF5 828 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 MTMR8Q96EF0 704 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 GLT1D1Q96MS3 346 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 TOX2Q96NM4 488 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 AMNQ9BXJ7 453 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 UPF3AQ9H1J1 476 aaKnown RBP11.03□□□□□ -0.64
SF3B3-211ENST00000568291 RIOX1Q9H6W3 641 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 SPC25Q9HBM1 224 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 TBX21Q9UL17 535 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 SLC12A7Q9Y666 1083 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 WDR19Q8NEZ3 1342 aa11.03□□□□□ -0.64
SF3B3-211ENST00000568291 A0A0U1RQG5 324 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-211ENST00000568291 RBAK-RBAKDNI3L0D1 243 aa11.02□□□□□ -0.65
SF3B3-211ENST00000568291 SORBS3O60504 671 aa11.02□□□□□ -0.65
SF3B3-211ENST00000568291 ASGR1P07306 291 aa11.02□□□□□ -0.65
SF3B3-211ENST00000568291 HSPA4P34932 840 aa11.02□□□□□ -0.65
SF3B3-211ENST00000568291 ERICH6BQ5W0A0 696 aa11.02□□□□□ -0.65
SF3B3-211ENST00000568291 DHX32Q7L7V1 743 aaKnown RBP11.02□□□□□ -0.65
SF3B3-211ENST00000568291 PCSK9Q8NBP7 692 aaKnown RBP11.02□□□□□ -0.65
SF3B3-211ENST00000568291 CTCFLQ8NI51 663 aaPredicted RBP11.02□□□□□ -0.65
SF3B3-211ENST00000568291 COPS5Q92905 334 aa11.02□□□□□ -0.65
SF3B3-211ENST00000568291 TMEM87BQ96K49 555 aa11.02□□□□□ -0.65
SF3B3-211ENST00000568291 MRPL11Q9Y3B7 192 aaKnown RBP11.02□□□□□ -0.65
SF3B3-211ENST00000568291 ELP1O95163 1332 aa11.02□□□□□ -0.65
SF3B3-211ENST00000568291 ABCB11O95342 1321 aa11.02□□□□□ -0.65
SF3B3-211ENST00000568291 PNMA6FA0A0J9YX94 578 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 KLF18A0A0U1RQI7 1052 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 CTAGE5O15320 804 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 DTNBO60941 627 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 DDAH1O94760 285 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 TIMP1P01033 207 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 EIF2AK2P19525 551 aaKnown RBP11.01□□□□□ -0.65
SF3B3-211ENST00000568291 LIFRP42702 1097 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 GJA9P57773 515 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 PDE4DQ08499 809 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 APOBRQ0VD83 1088 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 PPIGQ13427 754 aaKnown RBP eCLIP11.01□□□□□ -0.652e-12■□□□□ 9.2
SF3B3-211ENST00000568291 TSGA10IPQ3SY00 556 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 GNASQ5JWF2 1037 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 SEPT14Q6ZU15 432 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 Q6ZUG5 572 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 FCHSD1Q86WN1 690 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 FANCBQ8NB91 859 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 VTI1AQ96AJ9 217 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 RMDN3Q96TC7 470 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.01□□□□□ -0.651e-8■■□□□ 13
SF3B3-211ENST00000568291 USP26Q9BXU7 913 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 PPP1R12CQ9BZL4 782 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 ADD3Q9UEY8 706 aaKnown RBP11.01□□□□□ -0.65
SF3B3-211ENST00000568291 TANC1Q9C0D5 1861 aa11.01□□□□□ -0.65
SF3B3-211ENST00000568291 LAMA4Q16363 1823 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 HSFX4A0A1B0GTS1 333 aaPredicted RBP11□□□□□ -0.65
SF3B3-211ENST00000568291 HSFX3A0A1B0GWH4 333 aaPredicted RBP11□□□□□ -0.65
SF3B3-211ENST00000568291 ARVCFO00192 962 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 PITPNM1O00562 1244 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 TLR3O15455 904 aaKnown RBP11□□□□□ -0.65
SF3B3-211ENST00000568291 ARIH2O95376 493 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 MYCLP12524 364 aaPredicted RBP11□□□□□ -0.65
SF3B3-211ENST00000568291 KIF5BP33176 963 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 CDK7P50613 346 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 FGD1P98174 961 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 ARHGEF16Q5VV41 709 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 MFSD5Q6N075 450 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 APOA5Q6Q788 366 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 TLK2Q86UE8 772 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 MCF2L2Q86YR7 1114 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 FAM126BQ8IXS8 530 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 TMTC2Q8N394 836 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 IL31RAQ8NI17 732 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 MORC4Q8TE76 937 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 KCNB2Q92953 911 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 BRF1Q92994 677 aa11□□□□□ -0.65
SF3B3-211ENST00000568291 TIFAQ96CG3 184 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms