RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 ACTR5Q9H9F9 607 aaPredicted RBP11.99□□□□□ -0.49
PALB2-206ENST00000568219 NEXMIFQ5QGS0 1516 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 PLCG1P19174 1290 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 SARSP49591 514 aaKnown RBP11.98□□□□□ -0.49
PALB2-206ENST00000568219 RABL6Q3YEC7 729 aaPredicted RBP11.98□□□□□ -0.49
PALB2-206ENST00000568219 TTMPQ5BVD1 217 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 CDKAL1Q5VV42 579 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 ZCRB1Q8TBF4 217 aaKnown RBP11.98□□□□□ -0.49
PALB2-206ENST00000568219 LPIN2Q92539 896 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 TAOK3Q9H2K8 898 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 SMIM24O75264 130 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 VPS41P49754 854 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 PMS1P54277 932 aaKnown RBP11.98□□□□□ -0.49
PALB2-206ENST00000568219 DYNLL1P63167 89 aaKnown RBP11.98□□□□□ -0.49
PALB2-206ENST00000568219 MKRN4PQ13434 485 aaPredicted RBP11.98□□□□□ -0.49
PALB2-206ENST00000568219 LRRC14Q15048 493 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 GRIPAP1Q4V328 841 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 DISC1Q9NRI5 854 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 TSKSQ9UJT2 592 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 FBXL5Q9UKA1 691 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 DAPK3O43293 454 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 DIAPH2O60879 1101 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 PRPF6O94906 941 aaKnown RBP11.98□□□□□ -0.49
PALB2-206ENST00000568219 CCNE1P24864 410 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 CCDC38Q502W7 563 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 MAEAQ7L5Y9 396 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 U2AF1L4Q8WU68 220 aaKnown RBP11.98□□□□□ -0.49
PALB2-206ENST00000568219 BIN2Q9UBW5 565 aaPredicted RBP11.98□□□□□ -0.49
PALB2-206ENST00000568219 AMACRQ9UHK6 382 aa11.98□□□□□ -0.49
PALB2-206ENST00000568219 TPX2Q9ULW0 747 aaKnown RBP11.98□□□□□ -0.49
PALB2-206ENST00000568219 H0Y3Z8 333 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 NTRK3Q16288 839 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 PAPD7Q5XG87 772 aaKnown RBP11.97□□□□□ -0.49
PALB2-206ENST00000568219 SEC16BQ96JE7 1060 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 SERPINA10Q9UK55 444 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 L3MBTL1Q9Y468 752 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 FAM107AO95990 144 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 GYG1P46976 350 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 HOOK3Q86VS8 718 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 RETREG2Q8NC44 543 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 SNX29Q8TEQ0 813 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 WHAMMQ8TF30 809 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 NSMCE1Q8WV22 266 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 LMBR1Q8WVP7 490 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 DNAJC17Q9NVM6 304 aaKnown RBP11.97□□□□□ -0.49
PALB2-206ENST00000568219 XDHP47989 1333 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 AGPSO00116 658 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 HIP1RO75146 1068 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 MMEP08473 750 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 PDHA1P08559 390 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 LONP1P36776 959 aaKnown RBP11.97□□□□□ -0.49
PALB2-206ENST00000568219 TFAP4Q01664 338 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 STK4Q13043 487 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 INTS8Q75QN2 995 aaKnown RBP11.97□□□□□ -0.49
PALB2-206ENST00000568219 KIF2BQ8N4N8 673 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 SAAL1Q96ER3 474 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 THAP9Q9H5L6 903 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 REXO2Q9Y3B8 237 aaKnown RBP11.97□□□□□ -0.49
PALB2-206ENST00000568219 PALLDQ8WX93 1383 aa11.97□□□□□ -0.49
PALB2-206ENST00000568219 MXRA7P84157 204 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 RASGRF1Q13972 1273 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 TRADDQ15628 312 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 SWT1Q5T5J6 900 aaKnown RBP11.96□□□□□ -0.49
PALB2-206ENST00000568219 SGMS1Q86VZ5 419 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 SGSM3Q96HU1 749 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 IFT74Q96LB3 600 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 PTPN22Q9Y2R2 807 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 MLH3Q9UHC1 1453 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 SPDYE3A6NKU9 549 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 NBPF26B4DH59 902 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 OPLAHO14841 1288 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 PPP2R2AP63151 447 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 AMPD2Q01433 879 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 MTMR3Q13615 1198 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 NBPF10Q6P3W6 841 aaKnown RBP11.96□□□□□ -0.49
PALB2-206ENST00000568219 CNPY4Q8N129 248 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 NBPF15Q8N660 670 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 TTLL11Q8NHH1 800 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 GDAP1Q8TB36 358 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 DHTKD1Q96HY7 919 aaPredicted RBP11.96□□□□□ -0.49
PALB2-206ENST00000568219 CRNKL1Q9BZJ0 848 aaKnown RBP11.96□□□□□ -0.49
PALB2-206ENST00000568219 MTRF1LQ9UGC7 380 aaKnown RBP11.96□□□□□ -0.49
PALB2-206ENST00000568219 ITIH6Q6UXX5 1313 aa11.96□□□□□ -0.49
PALB2-206ENST00000568219 RAD51CO43502 376 aa11.96□□□□□ -0.5
PALB2-206ENST00000568219 CIAO1O76071 339 aa11.96□□□□□ -0.5
PALB2-206ENST00000568219 GCFC2P16383 781 aaKnown RBP11.96□□□□□ -0.5
PALB2-206ENST00000568219 SMTNP53814 917 aa11.96□□□□□ -0.5
PALB2-206ENST00000568219 EIF6P56537 245 aaKnown RBP11.96□□□□□ -0.5
PALB2-206ENST00000568219 PLS1Q14651 629 aa11.96□□□□□ -0.5
PALB2-206ENST00000568219 VWA3BQ502W6 1294 aa11.96□□□□□ -0.5
PALB2-206ENST00000568219 ARMC2Q8NEN0 867 aa11.96□□□□□ -0.5
PALB2-206ENST00000568219 KIF9Q9HAQ2 790 aa11.96□□□□□ -0.5
PALB2-206ENST00000568219 ARPP21Q9UBL0 812 aaPredicted RBP11.96□□□□□ -0.5
PALB2-206ENST00000568219 TBX22Q9Y458 520 aa11.96□□□□□ -0.5
PALB2-206ENST00000568219 CPDO75976 1380 aa11.96□□□□□ -0.5
PALB2-206ENST00000568219 GJC1P36383 396 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 TAF11Q15544 211 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 CAPRIN2Q6IMN6 1127 aaKnown RBP11.95□□□□□ -0.5
PALB2-206ENST00000568219 ADSSL1Q8N142 457 aa11.95□□□□□ -0.5
PALB2-206ENST00000568219 FAM217BQ9NTX9 383 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms