RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 RMDN3Q96TC7 470 aa20.65■□□□□ 0.9
COMMD4-222ENST00000568034 TINF2Q9BSI4 451 aa20.65■□□□□ 0.9
COMMD4-222ENST00000568034 GLT8D2Q9H1C3 349 aa20.65■□□□□ 0.9
COMMD4-222ENST00000568034 C6orf50Q9HD87 102 aa20.65■□□□□ 0.9
COMMD4-222ENST00000568034 PXMP2Q9NR77 195 aa20.65■□□□□ 0.9
COMMD4-222ENST00000568034 TMEM260Q9NX78 707 aa20.65■□□□□ 0.9
COMMD4-222ENST00000568034 ADD3Q9UEY8 706 aaKnown RBP20.65■□□□□ 0.9
COMMD4-222ENST00000568034 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.65■□□□□ 0.9
COMMD4-222ENST00000568034 LOC102724159A0A0B4J2E5 919 aa20.64■□□□□ 0.89
COMMD4-222ENST00000568034 SNAI1O95863 264 aaPredicted RBP20.64■□□□□ 0.89
COMMD4-222ENST00000568034 HMGCRP04035 888 aa20.64■□□□□ 0.89
COMMD4-222ENST00000568034 GNA11P29992 359 aa20.64■□□□□ 0.89
COMMD4-222ENST00000568034 CYP2C19P33261 490 aa20.64■□□□□ 0.89
COMMD4-222ENST00000568034 FOSBP53539 338 aa20.64■□□□□ 0.89
COMMD4-222ENST00000568034 PWP2Q15269 919 aaKnown RBP20.64■□□□□ 0.89
COMMD4-222ENST00000568034 ARMCX2Q7L311 632 aa20.64■□□□□ 0.89
COMMD4-222ENST00000568034 IL31RAQ8NI17 732 aa20.64■□□□□ 0.89
COMMD4-222ENST00000568034 RASGRP4Q8TDF6 673 aa20.64■□□□□ 0.89
COMMD4-222ENST00000568034 PDCD2LQ9BRP1 358 aa20.64■□□□□ 0.89
COMMD4-222ENST00000568034 KATNBL1Q9H079 304 aa20.64■□□□□ 0.89
COMMD4-222ENST00000568034 PCDHA4Q9UN74 947 aa20.64■□□□□ 0.89
COMMD4-222ENST00000568034 SMC3Q9UQE7 1217 aa20.64■□□□□ 0.89
COMMD4-222ENST00000568034 INHAP05111 366 aa20.63■□□□□ 0.89
COMMD4-222ENST00000568034 XBP1P17861 261 aa20.63■□□□□ 0.89
COMMD4-222ENST00000568034 EIF2AK2P19525 551 aaKnown RBP20.63■□□□□ 0.89
COMMD4-222ENST00000568034 MAP3K21Q5TCX8 1036 aa20.63■□□□□ 0.89
COMMD4-222ENST00000568034 KRT40Q6A162 431 aa20.63■□□□□ 0.89
COMMD4-222ENST00000568034 FAM184AQ8NB25 1140 aa20.63■□□□□ 0.89
COMMD4-222ENST00000568034 NSUN6Q8TEA1 469 aaKnown RBP20.63■□□□□ 0.89
COMMD4-222ENST00000568034 PGBD1Q96JS3 809 aa20.63■□□□□ 0.89
COMMD4-222ENST00000568034 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.63■□□□□ 0.89
COMMD4-222ENST00000568034 BIN2Q9UBW5 565 aaPredicted RBP20.63■□□□□ 0.89
COMMD4-222ENST00000568034 PCDHA6Q9UN73 950 aa20.63■□□□□ 0.89
COMMD4-222ENST00000568034 PCDHA8Q9Y5H6 950 aa20.63■□□□□ 0.89
COMMD4-222ENST00000568034 ASB14A6NK59 587 aa20.62■□□□□ 0.89
COMMD4-222ENST00000568034 AP3B2Q13367 1082 aa20.62■□□□□ 0.89
COMMD4-222ENST00000568034 JAKMIP3Q5VZ66 844 aa20.62■□□□□ 0.89
COMMD4-222ENST00000568034 GALNT17Q6IS24 598 aa20.62■□□□□ 0.89
COMMD4-222ENST00000568034 BLIDQ8IZY5 108 aa20.62■□□□□ 0.89
COMMD4-222ENST00000568034 REXO1Q8N1G1 1221 aaKnown RBP20.62■□□□□ 0.89
COMMD4-222ENST00000568034 TRPV1Q8NER1 839 aa20.62■□□□□ 0.89
COMMD4-222ENST00000568034 OXER1Q8TDS5 423 aa20.62■□□□□ 0.89
COMMD4-222ENST00000568034 ARMC5Q96C12 935 aa20.62■□□□□ 0.89
COMMD4-222ENST00000568034 C8orf76Q96K31 380 aa20.62■□□□□ 0.89
COMMD4-222ENST00000568034 ANO3Q9BYT9 981 aa20.62■□□□□ 0.89
COMMD4-222ENST00000568034 MMP1P03956 469 aa20.61■□□□□ 0.89
COMMD4-222ENST00000568034 CYBAP13498 195 aa20.61■□□□□ 0.89
COMMD4-222ENST00000568034 UBXN2AP68543 259 aa20.61■□□□□ 0.89
COMMD4-222ENST00000568034 GUCY1B3Q02153 619 aa20.61■□□□□ 0.89
COMMD4-222ENST00000568034 CACNB2Q08289 660 aaPredicted RBP20.61■□□□□ 0.89
COMMD4-222ENST00000568034 PGM5Q15124 567 aa20.61■□□□□ 0.89
COMMD4-222ENST00000568034 SLC9C1Q4G0N8 1177 aa20.61■□□□□ 0.89
COMMD4-222ENST00000568034 ARHGEF16Q5VV41 709 aa20.61■□□□□ 0.89
COMMD4-222ENST00000568034 MFSD14CQ5VZR4 134 aa20.61■□□□□ 0.89
COMMD4-222ENST00000568034 FBXO18Q8NFZ0 1043 aa20.61■□□□□ 0.89
COMMD4-222ENST00000568034 BICD2Q8TD16 824 aa20.61■□□□□ 0.89
COMMD4-222ENST00000568034 TNFRSF25Q93038 417 aa20.61■□□□□ 0.89
COMMD4-222ENST00000568034 IWS1Q96ST2 819 aa20.61■□□□□ 0.89
COMMD4-222ENST00000568034 FOXD4L1Q9NU39 408 aa20.61■□□□□ 0.89
COMMD4-222ENST00000568034 CENPFP49454 3210 aa20.61■□□□□ 0.89
COMMD4-222ENST00000568034 SPDYE3A6NKU9 549 aa20.6■□□□□ 0.89
COMMD4-222ENST00000568034 FOSP01100 380 aaPredicted RBP20.6■□□□□ 0.89
COMMD4-222ENST00000568034 NR3C2P08235 984 aa20.6■□□□□ 0.89
COMMD4-222ENST00000568034 ZNF865P0CJ78 1059 aaPredicted RBP20.6■□□□□ 0.89
COMMD4-222ENST00000568034 PRKAR2AP13861 404 aaKnown RBP20.6■□□□□ 0.89
COMMD4-222ENST00000568034 CRYGNQ8WXF5 182 aa20.6■□□□□ 0.89
COMMD4-222ENST00000568034 ZNF333Q96JL9 665 aa20.6■□□□□ 0.89
COMMD4-222ENST00000568034 EDIL3O43854 480 aa20.59■□□□□ 0.89
COMMD4-222ENST00000568034 SREBF1P36956 1147 aa20.59■□□□□ 0.89
COMMD4-222ENST00000568034 MRPS9P82933 396 aaKnown RBP20.59■□□□□ 0.89
COMMD4-222ENST00000568034 PRAMEF19Q5SWL8 479 aa20.59■□□□□ 0.89
COMMD4-222ENST00000568034 VSIG10LQ86VR7 867 aa20.59■□□□□ 0.89
COMMD4-222ENST00000568034 FBXO16Q8IX29 292 aaPredicted RBP20.59■□□□□ 0.89
COMMD4-222ENST00000568034 RGS20O76081 388 aa20.58■□□□□ 0.89
COMMD4-222ENST00000568034 KRT2P35908 639 aa20.58■□□□□ 0.89
COMMD4-222ENST00000568034 NR5A1Q13285 461 aa20.58■□□□□ 0.89
COMMD4-222ENST00000568034 TRIM29Q14134 588 aa20.58■□□□□ 0.89
COMMD4-222ENST00000568034 MTFR1Q15390 333 aa20.58■□□□□ 0.89
COMMD4-222ENST00000568034 EARS2Q5JPH6 523 aaKnown RBP20.58■□□□□ 0.89
COMMD4-222ENST00000568034 DIS3L2Q8IYB7 885 aaKnown RBP20.58■□□□□ 0.89
COMMD4-222ENST00000568034 ABHD16BQ9H3Z7 469 aa20.58■□□□□ 0.89
COMMD4-222ENST00000568034 NRBP1Q9UHY1 535 aa20.58■□□□□ 0.89
COMMD4-222ENST00000568034 KIF3AQ9Y496 699 aa20.58■□□□□ 0.89
COMMD4-222ENST00000568034 MYH7BA7E2Y1 1941 aa20.57■□□□□ 0.88
COMMD4-222ENST00000568034 BTBD18B2RXH4 712 aa20.57■□□□□ 0.88
COMMD4-222ENST00000568034 CCND2P30279 289 aa20.57■□□□□ 0.88
COMMD4-222ENST00000568034 CCND3P30281 292 aaPredicted RBP20.57■□□□□ 0.88
COMMD4-222ENST00000568034 PDE4DQ08499 809 aa20.57■□□□□ 0.88
COMMD4-222ENST00000568034 ACVR2BQ13705 512 aa20.57■□□□□ 0.88
COMMD4-222ENST00000568034 PCNX4Q63HM2 1172 aa20.57■□□□□ 0.88
COMMD4-222ENST00000568034 MCTP2Q6DN12 878 aa20.57■□□□□ 0.88
COMMD4-222ENST00000568034 TAPT1Q6NXT6 567 aa20.57■□□□□ 0.88
COMMD4-222ENST00000568034 EEPD1Q7L9B9 569 aa20.57■□□□□ 0.88
COMMD4-222ENST00000568034 ZFP91Q96JP5 570 aaPredicted RBP20.57■□□□□ 0.88
COMMD4-222ENST00000568034 VTA1Q9NP79 307 aa20.57■□□□□ 0.88
COMMD4-222ENST00000568034 TSHZ2Q9NRE2 1034 aa20.57■□□□□ 0.88
COMMD4-222ENST00000568034 FAM205CA6NFA0 338 aa20.56■□□□□ 0.88
COMMD4-222ENST00000568034 MYCLP12524 364 aaPredicted RBP20.56■□□□□ 0.88
COMMD4-222ENST00000568034 STXBP2Q15833 593 aa20.56■□□□□ 0.88
COMMD4-222ENST00000568034 MPHOSPH6Q99547 160 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms