RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 FAM109BQ6ICB4 259 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 MCF2L2Q86YR7 1114 aa14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 SLC43A3Q8NBI5 491 aa14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 RGS22Q8NE09 1264 aa14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 NCOA7Q8NI08 942 aa14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 SCFD2Q8WU76 684 aa14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 PIGSQ96S52 555 aa14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 RMDN3Q96TC7 470 aa14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 MPHOSPH6Q99547 160 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 TRMT13Q9NUP7 481 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 COL6A3P12111 3177 aa14.23□□□□□ -0.13
GTF3C1-208ENST00000567843 BAZ2BQ9UIF8 2168 aaKnown RBP14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 LOC102724159A0A0B4J2E5 919 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 PALM3A6NDB9 673 aaPredicted RBP14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 GRXCR1A8MXD5 290 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 OPLAHO14841 1288 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 SORBS3O60504 671 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 CYP2C9P11712 490 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 HOXA13P31271 388 aaPredicted RBP14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 CPT1AP50416 773 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 PURAQ00577 322 aaKnown RBP14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 GRM4Q14833 912 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 PWP2Q15269 919 aaKnown RBP14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 LY6KQ17RY6 165 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 ARHGEF16Q5VV41 709 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 ZNF365Q70YC5 407 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 TMEM199Q8N511 208 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 MAP4K1Q92918 833 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 MYL10Q9BUA6 226 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 AMNQ9BXJ7 453 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 TTYH1Q9H313 450 aaPredicted RBP14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 SEMA6BQ9H3T3 888 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 HIPK3Q9H422 1215 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 POLR3EQ9NVU0 708 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 STXBP5LQ9Y2K9 1186 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 PCDHA1Q9Y5I3 950 aa14.22□□□□□ -0.13
GTF3C1-208ENST00000567843 B4DLN1 442 aa14.21□□□□□ -0.13
GTF3C1-208ENST00000567843 RBAK-RBAKDNI3L0D1 243 aa14.21□□□□□ -0.13
GTF3C1-208ENST00000567843 ZBTB5O15062 677 aa14.21□□□□□ -0.13
GTF3C1-208ENST00000567843 MYCLP12524 364 aaPredicted RBP14.21□□□□□ -0.13
GTF3C1-208ENST00000567843 MRPL12P52815 198 aaKnown RBP14.21□□□□□ -0.13
GTF3C1-208ENST00000567843 SMAD3P84022 425 aaKnown RBP14.21□□□□□ -0.13
GTF3C1-208ENST00000567843 PPIGQ13427 754 aaKnown RBP eCLIP14.21□□□□□ -0.139e-10■□□□□ 9.5
GTF3C1-208ENST00000567843 TTLL4Q14679 1199 aa14.21□□□□□ -0.13
GTF3C1-208ENST00000567843 NBPF20Q3BBV1 942 aa14.21□□□□□ -0.13
GTF3C1-208ENST00000567843 TMEM240Q5SV17 173 aa14.21□□□□□ -0.13
GTF3C1-208ENST00000567843 RAB11FIP4Q86YS3 637 aa14.21□□□□□ -0.13
GTF3C1-208ENST00000567843 NSUN6Q8TEA1 469 aaKnown RBP14.21□□□□□ -0.13
GTF3C1-208ENST00000567843 AFG1LQ8WV93 481 aa14.21□□□□□ -0.13
GTF3C1-208ENST00000567843 SCLYQ96I15 445 aa14.21□□□□□ -0.13
GTF3C1-208ENST00000567843 MTG1Q9BT17 334 aaPredicted RBP14.21□□□□□ -0.13
GTF3C1-208ENST00000567843 ALDH8A1Q9H2A2 487 aaPredicted RBP14.21□□□□□ -0.13
GTF3C1-208ENST00000567843 CYTH3O43739 400 aa14.2□□□□□ -0.14
GTF3C1-208ENST00000567843 SART3Q15020 963 aaKnown RBP14.2□□□□□ -0.14
GTF3C1-208ENST00000567843 STXBP2Q15833 593 aa14.2□□□□□ -0.14
GTF3C1-208ENST00000567843 FCHSD1Q86WN1 690 aa14.2□□□□□ -0.14
GTF3C1-208ENST00000567843 MB21D2Q8IYB1 491 aaPredicted RBP14.2□□□□□ -0.14
GTF3C1-208ENST00000567843 IGDCC4Q8TDY8 1250 aa14.2□□□□□ -0.14
GTF3C1-208ENST00000567843 MYLIPQ8WY64 445 aa14.2□□□□□ -0.14
GTF3C1-208ENST00000567843 CDX2Q99626 313 aaPredicted RBP14.2□□□□□ -0.14
GTF3C1-208ENST00000567843 NOC4LQ9BVI4 516 aaKnown RBP14.2□□□□□ -0.14
GTF3C1-208ENST00000567843 LSG1Q9H089 658 aaKnown RBP14.2□□□□□ -0.14
GTF3C1-208ENST00000567843 WNT8AQ9H1J5 351 aa14.2□□□□□ -0.14
GTF3C1-208ENST00000567843 PXMP2Q9NR77 195 aa14.2□□□□□ -0.14
GTF3C1-208ENST00000567843 A6NJR5 290 aa14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 NKRFO15226 690 aaKnown RBP eCLIP14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 PRC1O43663 620 aa14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 NR3C2P08235 984 aa14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 RXRAP19793 462 aa14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 PBX2P40425 430 aa14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 TROAPQ12815 778 aa14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 BRDTQ58F21 947 aaPredicted RBP14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 CCDC62Q6P9F0 684 aa14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 OTOP2Q7RTS6 562 aa14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 CATIPQ7Z7H3 387 aa14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 MTMR8Q96EF0 704 aa14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 ESYT1Q9BSJ8 1104 aa14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 LRRC2Q9BYS8 371 aa14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 IL23AQ9NPF7 189 aa14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 ANO2Q9NQ90 1003 aa14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 CXXC1Q9P0U4 656 aaPredicted RBP14.19□□□□□ -0.14
GTF3C1-208ENST00000567843 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.18□□□□□ -0.14
GTF3C1-208ENST00000567843 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.18□□□□□ -0.14
GTF3C1-208ENST00000567843 SLC27A2O14975 620 aa14.18□□□□□ -0.14
GTF3C1-208ENST00000567843 GH1P01241 217 aa14.18□□□□□ -0.14
GTF3C1-208ENST00000567843 HSD17B4P51659 736 aa14.18□□□□□ -0.14
GTF3C1-208ENST00000567843 ARHGAP1Q07960 439 aa14.18□□□□□ -0.14
GTF3C1-208ENST00000567843 NFXL1Q6ZNB6 911 aa14.18□□□□□ -0.14
GTF3C1-208ENST00000567843 CMTR1Q8N1G2 835 aaKnown RBP14.18□□□□□ -0.14
GTF3C1-208ENST00000567843 IL31RAQ8NI17 732 aa14.18□□□□□ -0.14
GTF3C1-208ENST00000567843 IWS1Q96ST2 819 aa14.18□□□□□ -0.14
GTF3C1-208ENST00000567843 RIOX1Q9H6W3 641 aa14.18□□□□□ -0.14
GTF3C1-208ENST00000567843 LY9Q9HBG7 655 aa14.18□□□□□ -0.14
GTF3C1-208ENST00000567843 DDX41Q9UJV9 622 aaKnown RBP14.18□□□□□ -0.14
GTF3C1-208ENST00000567843 MRVI1Q9Y6F6 885 aa14.18□□□□□ -0.14
GTF3C1-208ENST00000567843 CUL9Q8IWT3 2517 aa14.18□□□□□ -0.14
GTF3C1-208ENST00000567843 PNMA6FA0A0J9YX94 578 aa14.17□□□□□ -0.14
GTF3C1-208ENST00000567843 FGBP02675 491 aa14.17□□□□□ -0.14
GTF3C1-208ENST00000567843 MMP3P08254 477 aa14.17□□□□□ -0.14
GTF3C1-208ENST00000567843 DNAJB2P25686 324 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms