RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 SLC30A10Q6XR72 485 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 KIAA1211Q6ZU35 1233 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 NOL8Q76FK4 1167 aaKnown RBP5.58□□□□□ -1.52
CLK3-219ENST00000567805 CYB5R4Q7L1T6 521 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 EEPD1Q7L9B9 569 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 MCF2L2Q86YR7 1114 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 FBXO16Q8IX29 292 aaPredicted RBP5.58□□□□□ -1.52
CLK3-219ENST00000567805 TRIM43Q96BQ3 446 aaPredicted RBP5.58□□□□□ -1.52
CLK3-219ENST00000567805 PURBQ96QR8 312 aaKnown RBP5.58□□□□□ -1.52
CLK3-219ENST00000567805 UBA5Q9GZZ9 404 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 AP5M1Q9H0R1 490 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 CPVLQ9H3G5 476 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 JMJD4Q9H9V9 463 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 MAD2L2Q9UI95 211 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 MRPL11Q9Y3B7 192 aaKnown RBP5.58□□□□□ -1.52
CLK3-219ENST00000567805 UNC80Q8N2C7 3258 aa5.58□□□□□ -1.52
CLK3-219ENST00000567805 BAZ2BQ9UIF8 2168 aaKnown RBP5.57□□□□□ -1.52
CLK3-219ENST00000567805 SCN10AQ9Y5Y9 1956 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 A0A0U1RQG5 324 aaPredicted RBP5.57□□□□□ -1.52
CLK3-219ENST00000567805 RBM47A0AV96 593 aaKnown RBP5.57□□□□□ -1.52
CLK3-219ENST00000567805 PALM3A6NDB9 673 aaPredicted RBP5.57□□□□□ -1.52
CLK3-219ENST00000567805 KLRF2D3W0D1 207 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 ARVCFO00192 962 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 SOX1O00570 391 aaPredicted RBP5.57□□□□□ -1.52
CLK3-219ENST00000567805 IFIT3O14879 490 aaKnown RBP5.57□□□□□ -1.52
CLK3-219ENST00000567805 NKRFO15226 690 aaKnown RBP eCLIP5.57□□□□□ -1.52
CLK3-219ENST00000567805 CTAGE5O15320 804 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 DYNC1LI2O43237 492 aaPredicted RBP5.57□□□□□ -1.52
CLK3-219ENST00000567805 GTPBP6O43824 516 aaPredicted RBP5.57□□□□□ -1.52
CLK3-219ENST00000567805 DHX16O60231 1041 aaKnown RBP5.57□□□□□ -1.52
CLK3-219ENST00000567805 CABYRO75952 493 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 RAG1P15918 1043 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 SMPD1P17405 629 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 EDNRBP24530 442 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 CPT1AP50416 773 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 CDK7P50613 346 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 BEX3Q00994 111 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 PDE4DQ08499 809 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 FAAP100Q0VG06 881 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 TRAF1Q13077 416 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 GRM4Q14833 912 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 WTAPQ15007 396 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 QRICH1Q2TAL8 776 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 DUSP28Q4G0W2 176 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 BMP2KLQ5H9B9 411 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 STOX1Q6ZVD7 989 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 SH3RF1Q7Z6J0 888 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 CATIPQ7Z7H3 387 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 FBXO11Q86XK2 927 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 STAG2Q8N3U4 1231 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 SAMD3Q8N6K7 520 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 SCFD2Q8WU76 684 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 BADQ92934 168 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 VTI1AQ96AJ9 217 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 MTMR8Q96EF0 704 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 LRCH3Q96II8 777 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 MAP3K14Q99558 947 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 ESYT1Q9BSJ8 1104 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 MTA3Q9BTC8 594 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 AMNQ9BXJ7 453 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 SEZ6LQ9BYH1 1024 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 WDR11Q9BZH6 1224 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 LSG1Q9H089 658 aaKnown RBP5.57□□□□□ -1.52
CLK3-219ENST00000567805 PDGFCQ9NRA1 345 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 TMEM39AQ9NV64 488 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 RBM8AQ9Y5S9 174 aaKnown RBP5.57□□□□□ -1.52
CLK3-219ENST00000567805 TAF6LQ9Y6J9 622 aa5.57□□□□□ -1.52
CLK3-219ENST00000567805 DDX49Q9Y6V7 483 aaKnown RBP5.57□□□□□ -1.52
CLK3-219ENST00000567805 PRUNE2Q8WUY3 3088 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 TANC1Q9C0D5 1861 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 RIOK3O14730 519 aaKnown RBP5.56□□□□□ -1.52
CLK3-219ENST00000567805 ZBTB5O15062 677 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 TLR3O15455 904 aaKnown RBP5.56□□□□□ -1.52
CLK3-219ENST00000567805 TIMP1P01033 207 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 CD4P01730 458 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 HOXB1P14653 301 aaPredicted RBP5.56□□□□□ -1.52
CLK3-219ENST00000567805 ITGB8P26012 769 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 MCM5P33992 734 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 HSD17B4P51659 736 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 ANTXR2P58335 489 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 GHRHRQ02643 423 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 TROAPQ12815 778 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 PPP2R5BQ15173 497 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 TMEM67Q5HYA8 995 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 TMEM63BQ5T3F8 832 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 CASC1Q6TDU7 716 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 CXCL17Q6UXB2 119 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 CHST3Q7LGC8 479 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 FAM126BQ8IXS8 530 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 MB21D2Q8IYB1 491 aaPredicted RBP5.56□□□□□ -1.52
CLK3-219ENST00000567805 SLC43A3Q8NBI5 491 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 OR6J1Q8NGC5 347 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 IGDCC4Q8TDY8 1250 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 NSUN6Q8TEA1 469 aaKnown RBP5.56□□□□□ -1.52
CLK3-219ENST00000567805 IWS1Q96ST2 819 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 RMDN3Q96TC7 470 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 RIOX1Q9H6W3 641 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 VAT1LQ9HCJ6 419 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 ANO2Q9NQ90 1003 aa5.56□□□□□ -1.52
CLK3-219ENST00000567805 POLR3EQ9NVU0 708 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms