RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 DLL3Q9NYJ7 618 aa11.68□□□□□ -0.54
CAPN3-216ENST00000567071 SWAP70Q9UH65 585 aa11.68□□□□□ -0.54
CAPN3-216ENST00000567071 COG6Q9Y2V7 657 aa11.68□□□□□ -0.54
CAPN3-216ENST00000567071 RIPK3Q9Y572 518 aa11.68□□□□□ -0.54
CAPN3-216ENST00000567071 PDGFBP01127 241 aaPredicted RBP11.67□□□□□ -0.54
CAPN3-216ENST00000567071 CXCL10P02778 98 aa11.67□□□□□ -0.54
CAPN3-216ENST00000567071 HTRA4P83105 476 aaPredicted RBP11.67□□□□□ -0.54
CAPN3-216ENST00000567071 CNTN2Q02246 1040 aa11.67□□□□□ -0.54
CAPN3-216ENST00000567071 PTGISQ16647 500 aa11.67□□□□□ -0.54
CAPN3-216ENST00000567071 CCDC158Q5M9N0 1113 aa11.67□□□□□ -0.54
CAPN3-216ENST00000567071 CLEC10AQ8IUN9 316 aa11.67□□□□□ -0.54
CAPN3-216ENST00000567071 TRMT2AQ8IZ69 625 aaKnown RBP11.67□□□□□ -0.54
CAPN3-216ENST00000567071 TMEM105Q8N8V8 129 aa11.67□□□□□ -0.54
CAPN3-216ENST00000567071 PRPF38AQ8NAV1 312 aaKnown RBP11.67□□□□□ -0.54
CAPN3-216ENST00000567071 C11orf84Q9BUA3 381 aaPredicted RBP11.67□□□□□ -0.54
CAPN3-216ENST00000567071 MFSD1Q9H3U5 465 aa11.67□□□□□ -0.54
CAPN3-216ENST00000567071 VTA1Q9NP79 307 aa11.67□□□□□ -0.54
CAPN3-216ENST00000567071 INCENPQ9NQS7 918 aa11.67□□□□□ -0.54
CAPN3-216ENST00000567071 MYO5AQ9Y4I1 1855 aaKnown RBP11.67□□□□□ -0.54
CAPN3-216ENST00000567071 GPR179Q6PRD1 2367 aa11.66□□□□□ -0.54
CAPN3-216ENST00000567071 CTNNB1P35222 781 aa11.66□□□□□ -0.54
CAPN3-216ENST00000567071 RRP1P56182 461 aaKnown RBP11.66□□□□□ -0.54
CAPN3-216ENST00000567071 CHMP4BP1P59074 171 aa11.66□□□□□ -0.54
CAPN3-216ENST00000567071 ADAM15Q13444 863 aa11.66□□□□□ -0.54
CAPN3-216ENST00000567071 DUSP28Q4G0W2 176 aa11.66□□□□□ -0.54
CAPN3-216ENST00000567071 KIAA0319Q5VV43 1072 aa11.66□□□□□ -0.54
CAPN3-216ENST00000567071 ASTLQ6HA08 431 aaPredicted RBP11.66□□□□□ -0.54
CAPN3-216ENST00000567071 EEPD1Q7L9B9 569 aa11.66□□□□□ -0.54
CAPN3-216ENST00000567071 FBXO16Q8IX29 292 aaPredicted RBP11.66□□□□□ -0.54
CAPN3-216ENST00000567071 SMRP1Q8NCR6 262 aa11.66□□□□□ -0.54
CAPN3-216ENST00000567071 CCDC17Q96LX7 622 aa11.66□□□□□ -0.54
CAPN3-216ENST00000567071 MCM9Q9NXL9 1143 aa11.66□□□□□ -0.54
CAPN3-216ENST00000567071 RWDD3Q9Y3V2 267 aa11.66□□□□□ -0.54
CAPN3-216ENST00000567071 SETXQ7Z333 2677 aaKnown RBP11.65□□□□□ -0.54
CAPN3-216ENST00000567071 IDH1O75874 414 aaKnown RBP11.65□□□□□ -0.54
CAPN3-216ENST00000567071 CYP2E1P05181 493 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-216ENST00000567071 RB1P06400 928 aa11.65□□□□□ -0.54
CAPN3-216ENST00000567071 EEF2P13639 858 aaKnown RBP11.65□□□□□ -0.54
CAPN3-216ENST00000567071 PTGS1P23219 599 aa11.65□□□□□ -0.54
CAPN3-216ENST00000567071 SIAH1Q8IUQ4 282 aa11.65□□□□□ -0.54
CAPN3-216ENST00000567071 UBALD2Q8IYN6 164 aa11.65□□□□□ -0.54
CAPN3-216ENST00000567071 PIP4P2Q8N4L2 257 aa11.65□□□□□ -0.54
CAPN3-216ENST00000567071 FAM133AQ8N9E0 248 aa11.65□□□□□ -0.54
CAPN3-216ENST00000567071 OR6J1Q8NGC5 347 aa11.65□□□□□ -0.54
CAPN3-216ENST00000567071 MSLNLQ96KJ4 702 aa11.65□□□□□ -0.54
CAPN3-216ENST00000567071 HAUS7Q99871 368 aa11.65□□□□□ -0.54
CAPN3-216ENST00000567071 ACAD9Q9H845 621 aa11.65□□□□□ -0.54
CAPN3-216ENST00000567071 RAVER2Q9HCJ3 691 aaKnown RBP11.65□□□□□ -0.54
CAPN3-216ENST00000567071 PDGFCQ9NRA1 345 aa11.65□□□□□ -0.54
CAPN3-216ENST00000567071 HOMER2Q9NSB8 354 aa11.65□□□□□ -0.54
CAPN3-216ENST00000567071 USP15Q9Y4E8 981 aaPredicted RBP11.65□□□□□ -0.54
CAPN3-216ENST00000567071 PCDHGC5Q9Y5F6 944 aa11.65□□□□□ -0.54
CAPN3-216ENST00000567071 FRYLO94915 3013 aa11.65□□□□□ -0.54
CAPN3-216ENST00000567071 ATG2AQ2TAZ0 1938 aa11.64□□□□□ -0.55
CAPN3-216ENST00000567071 LINC01565O15544 149 aa11.64□□□□□ -0.55
CAPN3-216ENST00000567071 NBNO60934 754 aa11.64□□□□□ -0.55
CAPN3-216ENST00000567071 AKR1B1P15121 316 aa11.64□□□□□ -0.55
CAPN3-216ENST00000567071 COASYQ13057 564 aa11.64□□□□□ -0.55
CAPN3-216ENST00000567071 TAPT1Q6NXT6 567 aa11.64□□□□□ -0.55
CAPN3-216ENST00000567071 TMED8Q6PL24 325 aaPredicted RBP11.64□□□□□ -0.55
CAPN3-216ENST00000567071 CRNKL1Q9BZJ0 848 aaKnown RBP11.64□□□□□ -0.55
CAPN3-216ENST00000567071 KANSL2Q9H9L4 492 aa11.64□□□□□ -0.55
CAPN3-216ENST00000567071 EMSYQ7Z589 1322 aa11.63□□□□□ -0.55
CAPN3-216ENST00000567071 LGR5O75473 907 aa11.63□□□□□ -0.55
CAPN3-216ENST00000567071 CSPG5O95196 566 aa11.63□□□□□ -0.55
CAPN3-216ENST00000567071 CKBP12277 381 aa11.63□□□□□ -0.55
CAPN3-216ENST00000567071 ATF7P17544 494 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-216ENST00000567071 CLCN5P51795 746 aa11.63□□□□□ -0.55
CAPN3-216ENST00000567071 OAZ1P54368 228 aa11.63□□□□□ -0.55
CAPN3-216ENST00000567071 RBL2Q08999 1139 aa11.63□□□□□ -0.55
CAPN3-216ENST00000567071 MTMR3Q13615 1198 aa11.63□□□□□ -0.55
CAPN3-216ENST00000567071 GPNMBQ14956 572 aa11.63□□□□□ -0.55
CAPN3-216ENST00000567071 RSPO4Q2I0M5 234 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-216ENST00000567071 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.63□□□□□ -0.55
CAPN3-216ENST00000567071 FIBCD1Q8N539 461 aa11.63□□□□□ -0.55
CAPN3-216ENST00000567071 PPP1R13LQ8WUF5 828 aa11.63□□□□□ -0.55
CAPN3-216ENST00000567071 KIFC2Q96AC6 838 aa11.63□□□□□ -0.55
CAPN3-216ENST00000567071 WDR11Q9BZH6 1224 aa11.63□□□□□ -0.55
CAPN3-216ENST00000567071 SH2B1Q9NRF2 756 aaPredicted RBP11.63□□□□□ -0.55
CAPN3-216ENST00000567071 OTOGLQ3ZCN5 2332 aa11.63□□□□□ -0.55
CAPN3-216ENST00000567071 UPP2O95045 317 aa11.62□□□□□ -0.55
CAPN3-216ENST00000567071 GTF2F1P35269 517 aaKnown RBP eCLIP11.62□□□□□ -0.55
CAPN3-216ENST00000567071 ZAP70P43403 619 aa11.62□□□□□ -0.55
CAPN3-216ENST00000567071 DMWDQ09019 674 aa11.62□□□□□ -0.55
CAPN3-216ENST00000567071 AMOTL1Q8IY63 956 aa11.62□□□□□ -0.55
CAPN3-216ENST00000567071 EFHBQ8N7U6 833 aa11.62□□□□□ -0.55
CAPN3-216ENST00000567071 KREMEN2Q8NCW0 462 aa11.62□□□□□ -0.55
CAPN3-216ENST00000567071 RUBCNQ92622 972 aa11.62□□□□□ -0.55
CAPN3-216ENST00000567071 SLC38A10Q9HBR0 1119 aa11.62□□□□□ -0.55
CAPN3-216ENST00000567071 PIH1D3Q9NQM4 214 aaKnown RBP11.62□□□□□ -0.55
CAPN3-216ENST00000567071 SORCS3Q9UPU3 1222 aa11.62□□□□□ -0.55
CAPN3-216ENST00000567071 C5orf67F2Z3F1 127 aa11.61□□□□□ -0.55
CAPN3-216ENST00000567071 NKRFO15226 690 aaKnown RBP eCLIP11.61□□□□□ -0.55
CAPN3-216ENST00000567071 GRM6O15303 877 aa11.61□□□□□ -0.55
CAPN3-216ENST00000567071 SRGAP3O43295 1099 aa11.61□□□□□ -0.55
CAPN3-216ENST00000567071 FDX1P10109 184 aa11.61□□□□□ -0.55
CAPN3-216ENST00000567071 ANGPT1Q15389 498 aa11.61□□□□□ -0.55
CAPN3-216ENST00000567071 TCTN1Q2MV58 587 aa11.61□□□□□ -0.55
CAPN3-216ENST00000567071 CYP2W1Q8TAV3 490 aa11.61□□□□□ -0.55
CAPN3-216ENST00000567071 NUP88Q99567 741 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms