RNA–Protein interactions for RNA: ENST00000566875.2

HMGN2P40-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 40, humanhuman

BASIC

Gene HMGN2P40, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P40-201ENST00000566875 CD4P01730 458 aa11.78□□□□□ -0.52
HMGN2P40-201ENST00000566875 SUPT20HL2P0C7V6 817 aa11.78□□□□□ -0.52
HMGN2P40-201ENST00000566875 MCM5P33992 734 aa11.78□□□□□ -0.52
HMGN2P40-201ENST00000566875 SMAD3P84022 425 aaKnown RBP11.78□□□□□ -0.52
HMGN2P40-201ENST00000566875 TROAPQ12815 778 aa11.78□□□□□ -0.52
HMGN2P40-201ENST00000566875 PPIGQ13427 754 aaKnown RBP eCLIP11.78□□□□□ -0.52
HMGN2P40-201ENST00000566875 GRM4Q14833 912 aa11.78□□□□□ -0.52
HMGN2P40-201ENST00000566875 PPP2R5BQ15173 497 aa11.78□□□□□ -0.52
HMGN2P40-201ENST00000566875 C9orf50Q5SZB4 431 aa11.78□□□□□ -0.52
HMGN2P40-201ENST00000566875 ARHGEF16Q5VV41 709 aa11.78□□□□□ -0.52
HMGN2P40-201ENST00000566875 CHST3Q7LGC8 479 aa11.78□□□□□ -0.52
HMGN2P40-201ENST00000566875 OR6J1Q8NGC5 347 aa11.78□□□□□ -0.52
HMGN2P40-201ENST00000566875 MAP3K14Q99558 947 aa11.78□□□□□ -0.52
HMGN2P40-201ENST00000566875 MTG1Q9BT17 334 aaPredicted RBP11.78□□□□□ -0.52
HMGN2P40-201ENST00000566875 RIOX1Q9H6W3 641 aa11.78□□□□□ -0.52
HMGN2P40-201ENST00000566875 PNMA6FA0A0J9YX94 578 aa11.77□□□□□ -0.53
HMGN2P40-201ENST00000566875 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.77□□□□□ -0.53
HMGN2P40-201ENST00000566875 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.77□□□□□ -0.53
HMGN2P40-201ENST00000566875 NR3C2P08235 984 aa11.77□□□□□ -0.53
HMGN2P40-201ENST00000566875 MYL3P08590 195 aa11.77□□□□□ -0.53
HMGN2P40-201ENST00000566875 SMARCA1P28370 1054 aa11.77□□□□□ -0.53
HMGN2P40-201ENST00000566875 GNAQP50148 359 aa11.77□□□□□ -0.53
HMGN2P40-201ENST00000566875 CCDC62Q6P9F0 684 aa11.77□□□□□ -0.53
HMGN2P40-201ENST00000566875 CASC1Q6TDU7 716 aa11.77□□□□□ -0.53
HMGN2P40-201ENST00000566875 SEPT14Q6ZU15 432 aa11.77□□□□□ -0.53
HMGN2P40-201ENST00000566875 STOX1Q6ZVD7 989 aa11.77□□□□□ -0.53
HMGN2P40-201ENST00000566875 LZTS2Q9BRK4 669 aa11.77□□□□□ -0.53
HMGN2P40-201ENST00000566875 ESYT1Q9BSJ8 1104 aa11.77□□□□□ -0.53
HMGN2P40-201ENST00000566875 GRIN2DO15399 1336 aa11.77□□□□□ -0.53
HMGN2P40-201ENST00000566875 LAMA2P24043 3122 aaKnown RBP11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 GCOM1H8Y6P7 765 aaPredicted RBP11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 POLR2MP0CAP2 368 aa11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 KIF5BP33176 963 aa11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 HSD17B4P51659 736 aa11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 EPHB4P54760 987 aa11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 PURAQ00577 322 aaKnown RBP11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 GHRHRQ02643 423 aa11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 NECTIN1Q15223 517 aa11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 BMP2KLQ5H9B9 411 aa11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 RNF20Q5VTR2 975 aa11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 KCNV1Q6PIU1 500 aa11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 Q7L0L9 218 aa11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 RPUSD2Q8IZ73 545 aaKnown RBP11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 TMEM87BQ96K49 555 aa11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 RNPC3Q96LT9 517 aaKnown RBP11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 PIGSQ96S52 555 aa11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 LSG1Q9H089 658 aaKnown RBP11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 TRPV6Q9H1D0 765 aa11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 SEMA6BQ9H3T3 888 aa11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 STXBP5LQ9Y2K9 1186 aa11.76□□□□□ -0.53
HMGN2P40-201ENST00000566875 A0A0C4DFX4 3053 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 GH1P01241 217 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 FGBP02675 491 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 TGFB3P10600 412 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 CSF2RAP15509 400 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 CASTP20810 708 aaKnown RBP11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 PTGS1P23219 599 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 CYP2C18P33260 490 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 PSMC6P62333 389 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 PTPN11Q06124 597 aaPredicted RBP11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 LAMC2Q13753 1193 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 ZNF697Q5TEC3 545 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 NFRKBQ6P4R8 1299 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 NFXL1Q6ZNB6 911 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 C16orf59Q7L2K0 433 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 VSIG10LQ86VR7 867 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 HOMER1Q86YM7 354 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 MB21D2Q8IYB1 491 aaPredicted RBP11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 SLC17A8Q8NDX2 589 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 CTCFLQ8NI51 663 aaPredicted RBP11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 PPP1R12CQ9BZL4 782 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 ALDH8A1Q9H2A2 487 aaPredicted RBP11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 HIPK3Q9H422 1215 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 SENP2Q9HC62 589 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 ANO2Q9NQ90 1003 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 PXMP2Q9NR77 195 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 COL20A1Q9P218 1284 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 DDX41Q9UJV9 622 aaKnown RBP11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 TAF6LQ9Y6J9 622 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 MCM3APO60318 1980 aa11.75□□□□□ -0.53
HMGN2P40-201ENST00000566875 FRMPD3Q5JV73 1810 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 CCDC69A6NI79 296 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 SLC27A2O14975 620 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 PRC1O43663 620 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 CYTH3O43739 400 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 B4GALT4O60513 344 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 PPP1R11O60927 126 aaPredicted RBP11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 CALM1P0DP23 149 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 CALM2P0DP24 149 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 CALM3P0DP25 149 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 EIF2AK2P19525 551 aaKnown RBP11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 LIFRP42702 1097 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 ANTXR2P58335 489 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 LY6KQ17RY6 165 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 NBPF20Q3BBV1 942 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 TMEM240Q5SV17 173 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 CREB3L3Q68CJ9 461 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 SYNE3Q6ZMZ3 975 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 ZNF365Q70YC5 407 aa11.74□□□□□ -0.53
HMGN2P40-201ENST00000566875 COPS5Q92905 334 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms