RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 FBXO11Q86XK2 927 aa17.72■□□□□ 0.43
SMPD3-208ENST00000566723 MCF2L2Q86YR7 1114 aa17.72■□□□□ 0.43
SMPD3-208ENST00000566723 SYTL5Q8TDW5 730 aaPredicted RBP17.72■□□□□ 0.43
SMPD3-208ENST00000566723 NOC4LQ9BVI4 516 aaKnown RBP17.72■□□□□ 0.43
SMPD3-208ENST00000566723 TRPV6Q9H1D0 765 aa17.72■□□□□ 0.43
SMPD3-208ENST00000566723 ALDH8A1Q9H2A2 487 aaPredicted RBP17.72■□□□□ 0.43
SMPD3-208ENST00000566723 IL23AQ9NPF7 189 aa17.72■□□□□ 0.43
SMPD3-208ENST00000566723 MRPL11Q9Y3B7 192 aaKnown RBP17.72■□□□□ 0.43
SMPD3-208ENST00000566723 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
SMPD3-208ENST00000566723 UMODL1Q5DID0 1318 aa17.72■□□□□ 0.43
SMPD3-208ENST00000566723 CYP21A2P08686 494 aa17.71■□□□□ 0.43
SMPD3-208ENST00000566723 ACRP10323 421 aa17.71■□□□□ 0.43
SMPD3-208ENST00000566723 PTH1RQ03431 593 aa17.71■□□□□ 0.43
SMPD3-208ENST00000566723 TTLL4Q14679 1199 aa17.71■□□□□ 0.43
SMPD3-208ENST00000566723 STAG2Q8N3U4 1231 aa17.71■□□□□ 0.43
SMPD3-208ENST00000566723 NSUN6Q8TEA1 469 aaKnown RBP17.71■□□□□ 0.43
SMPD3-208ENST00000566723 TBC1D5Q92609 795 aa17.71■□□□□ 0.43
SMPD3-208ENST00000566723 MTG1Q9BT17 334 aaPredicted RBP17.71■□□□□ 0.43
SMPD3-208ENST00000566723 VAT1LQ9HCJ6 419 aa17.71■□□□□ 0.43
SMPD3-208ENST00000566723 GPHNQ9NQX3 736 aaPredicted RBP17.71■□□□□ 0.43
SMPD3-208ENST00000566723 COL20A1Q9P218 1284 aa17.71■□□□□ 0.43
SMPD3-208ENST00000566723 TRIP12Q14669 1992 aaPredicted RBP17.71■□□□□ 0.43
SMPD3-208ENST00000566723 A6NJR5 290 aa17.7■□□□□ 0.42
SMPD3-208ENST00000566723 ARIH2O95376 493 aa17.7■□□□□ 0.42
SMPD3-208ENST00000566723 TXNP10599 105 aaKnown RBP17.7■□□□□ 0.42
SMPD3-208ENST00000566723 ZNF365Q70YC5 407 aa17.7■□□□□ 0.42
SMPD3-208ENST00000566723 MYLIPQ8WY64 445 aa17.7■□□□□ 0.42
SMPD3-208ENST00000566723 COPS5Q92905 334 aa17.7■□□□□ 0.42
SMPD3-208ENST00000566723 AMNQ9BXJ7 453 aa17.7■□□□□ 0.42
SMPD3-208ENST00000566723 WNT8AQ9H1J5 351 aa17.7■□□□□ 0.42
SMPD3-208ENST00000566723 KLRF2D3W0D1 207 aa17.69■□□□□ 0.42
SMPD3-208ENST00000566723 SGSM2O43147 1006 aa17.69■□□□□ 0.42
SMPD3-208ENST00000566723 KPNA6O60684 536 aa17.69■□□□□ 0.42
SMPD3-208ENST00000566723 CCDC62Q6P9F0 684 aa17.69■□□□□ 0.42
SMPD3-208ENST00000566723 RALYLQ86SE5 291 aaKnown RBP17.69■□□□□ 0.42
SMPD3-208ENST00000566723 HERVK_113Q902F9 699 aa17.69■□□□□ 0.42
SMPD3-208ENST00000566723 MTMR8Q96EF0 704 aa17.69■□□□□ 0.42
SMPD3-208ENST00000566723 TAAR1Q96RJ0 339 aa17.69■□□□□ 0.42
SMPD3-208ENST00000566723 IWS1Q96ST2 819 aa17.69■□□□□ 0.42
SMPD3-208ENST00000566723 RMDN3Q96TC7 470 aa17.69■□□□□ 0.42
SMPD3-208ENST00000566723 MTIF3Q9H2K0 278 aaKnown RBP17.69■□□□□ 0.42
SMPD3-208ENST00000566723 TRMT13Q9NUP7 481 aaKnown RBP17.69■□□□□ 0.42
SMPD3-208ENST00000566723 MAD2L2Q9UI95 211 aa17.69■□□□□ 0.42
SMPD3-208ENST00000566723 CHD9Q3L8U1 2897 aa17.68■□□□□ 0.42
SMPD3-208ENST00000566723 PALM3A6NDB9 673 aaPredicted RBP17.68■□□□□ 0.42
SMPD3-208ENST00000566723 DLL1O00548 723 aa17.68■□□□□ 0.42
SMPD3-208ENST00000566723 OPLAHO14841 1288 aa17.68■□□□□ 0.42
SMPD3-208ENST00000566723 ZBTB5O15062 677 aa17.68■□□□□ 0.42
SMPD3-208ENST00000566723 SUPT20HL2P0C7V6 817 aa17.68■□□□□ 0.42
SMPD3-208ENST00000566723 CCL23P55773 120 aa17.68■□□□□ 0.42
SMPD3-208ENST00000566723 GHRHRQ02643 423 aa17.68■□□□□ 0.42
SMPD3-208ENST00000566723 GRM4Q14833 912 aa17.68■□□□□ 0.42
SMPD3-208ENST00000566723 TIFAQ96CG3 184 aa17.68■□□□□ 0.42
SMPD3-208ENST00000566723 ERICH2A1L162 156 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 E7EWF7 191 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 IFIT3O14879 490 aaKnown RBP17.67■□□□□ 0.42
SMPD3-208ENST00000566723 PPP1R11O60927 126 aaPredicted RBP17.67■□□□□ 0.42
SMPD3-208ENST00000566723 CFBP00751 764 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 FOSL2P15408 326 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 EIF2AK2P19525 551 aaKnown RBP17.67■□□□□ 0.42
SMPD3-208ENST00000566723 HSD17B4P51659 736 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 STXBP2Q15833 593 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 NBPF20Q3BBV1 942 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 FAM47CQ5HY64 1035 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 ARHGEF16Q5VV41 709 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 NFRKBQ6P4R8 1299 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 SEPT14Q6ZU15 432 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.67■□□□□ 0.42
SMPD3-208ENST00000566723 TET1Q8NFU7 2136 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 MAFAQ8NHW3 353 aaPredicted RBP17.67■□□□□ 0.42
SMPD3-208ENST00000566723 NCOA7Q8NI08 942 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 PBX4Q9BYU1 374 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 PXMP2Q9NR77 195 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 TAF6LQ9Y6J9 622 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 CHD7Q9P2D1 2997 aa17.67■□□□□ 0.42
SMPD3-208ENST00000566723 VCANP13611 3396 aa17.66■□□□□ 0.42
SMPD3-208ENST00000566723 GRXCR1A8MXD5 290 aa17.66■□□□□ 0.42
SMPD3-208ENST00000566723 GH1P01241 217 aa17.66■□□□□ 0.42
SMPD3-208ENST00000566723 FGBP02675 491 aa17.66■□□□□ 0.42
SMPD3-208ENST00000566723 MMP3P08254 477 aa17.66■□□□□ 0.42
SMPD3-208ENST00000566723 CYP2C9P11712 490 aa17.66■□□□□ 0.42
SMPD3-208ENST00000566723 ARHGAP1Q07960 439 aa17.66■□□□□ 0.42
SMPD3-208ENST00000566723 SART3Q15020 963 aaKnown RBP17.66■□□□□ 0.42
SMPD3-208ENST00000566723 STOX1Q6ZVD7 989 aa17.66■□□□□ 0.42
SMPD3-208ENST00000566723 SCLYQ96I15 445 aa17.66■□□□□ 0.42
SMPD3-208ENST00000566723 ZNF576Q9H609 170 aa17.66■□□□□ 0.42
SMPD3-208ENST00000566723 CXXC1Q9P0U4 656 aaPredicted RBP17.66■□□□□ 0.42
SMPD3-208ENST00000566723 PCDHA1Q9Y5I3 950 aa17.66■□□□□ 0.42
SMPD3-208ENST00000566723 NR3C2P08235 984 aa17.65■□□□□ 0.42
SMPD3-208ENST00000566723 PBX2P40425 430 aa17.65■□□□□ 0.42
SMPD3-208ENST00000566723 PTPN11Q06124 597 aaPredicted RBP17.65■□□□□ 0.42
SMPD3-208ENST00000566723 GRIN2CQ14957 1233 aa17.65■□□□□ 0.42
SMPD3-208ENST00000566723 WTAPQ15007 396 aa17.65■□□□□ 0.42
SMPD3-208ENST00000566723 LY6KQ17RY6 165 aa17.65■□□□□ 0.42
SMPD3-208ENST00000566723 SLC35G1Q2M3R5 365 aa17.65■□□□□ 0.42
SMPD3-208ENST00000566723 OTOP2Q7RTS6 562 aa17.65■□□□□ 0.42
SMPD3-208ENST00000566723 RPUSD2Q8IZ73 545 aaKnown RBP17.65■□□□□ 0.42
SMPD3-208ENST00000566723 AFG1LQ8WV93 481 aa17.65■□□□□ 0.42
SMPD3-208ENST00000566723 RIOX1Q9H6W3 641 aa17.65■□□□□ 0.42
SMPD3-208ENST00000566723 SENP2Q9HC62 589 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms