RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 CEP104O60308 925 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 GAS7O60861 476 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 PNMA6AP0CW24 399 aaPredicted RBP12.81□□□□□ -0.36
CDH1-210ENST00000566612 ARHGAP44Q17R89 818 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 NSMFQ6X4W1 530 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 KRT27Q7Z3Y8 459 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 NKX2-3Q8TAU0 364 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 JDP2Q8WYK2 163 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 MAGEF1Q9HAY2 307 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 CALUO43852 315 aaPredicted RBP12.81□□□□□ -0.36
CDH1-210ENST00000566612 EXOC3O60645 756 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 XRCC5P13010 732 aaKnown RBP12.81□□□□□ -0.36
CDH1-210ENST00000566612 FKBP3Q00688 224 aaKnown RBP12.81□□□□□ -0.36
CDH1-210ENST00000566612 KIAA0753Q2KHM9 967 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 RAD9BQ6WBX8 426 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 TBC1D16Q8TBP0 767 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 THAP9Q9H5L6 903 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 SWAP70Q9UH65 585 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 LGALS16A8MUM7 142 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 CCDC172P0C7W6 258 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 RASGRP2Q7LDG7 609 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 TRIM58Q8NG06 486 aa12.81□□□□□ -0.36
CDH1-210ENST00000566612 TNS2Q63HR2 1409 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 CCDC169A6NNP5 214 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 NR2F2P24468 414 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 EIF4A3P38919 411 aaKnown RBP12.8□□□□□ -0.36
CDH1-210ENST00000566612 ZBED6P86452 979 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 TBC1D10BQ4KMP7 808 aaPredicted RBP12.8□□□□□ -0.36
CDH1-210ENST00000566612 TRIM31Q9BZY9 425 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 ZCCHC17Q9NP64 241 aaKnown RBP12.8□□□□□ -0.36
CDH1-210ENST00000566612 SLIT3O75094 1523 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 FLT1P17948 1338 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 KIF13AQ9H1H9 1805 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 E9PMD0 336 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 RAD17O75943 681 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 GYS2P54840 703 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 MAN2A1Q16706 1144 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 STK17AQ9UEE5 414 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 FAM208AQ9UK61 1670 aaKnown RBP12.8□□□□□ -0.36
CDH1-210ENST00000566612 AFF2P51816 1311 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 CLIC2O15247 247 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 MYL1P05976 194 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 STK4Q13043 487 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 SEPT2Q15019 361 aa12.8□□□□□ -0.36
CDH1-210ENST00000566612 CDC37Q16543 378 aaPredicted RBP12.8□□□□□ -0.36
CDH1-210ENST00000566612 RC3H1Q5TC82 1133 aaKnown RBP12.8□□□□□ -0.36
CDH1-210ENST00000566612 GJD4Q96KN9 370 aaPredicted RBP12.8□□□□□ -0.36
CDH1-210ENST00000566612 SETD1AO15047 1707 aaKnown RBP12.79□□□□□ -0.36
CDH1-210ENST00000566612 SFI1A8K8P3 1242 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 PLA2G4BP0C869 781 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 ABCB4P21439 1286 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 CFAP58Q5T655 872 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 ANKRD40Q6AI12 368 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 BARGINQ6ZT62 677 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 ADGRF4Q8IZF3 695 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 LMBR1Q8WVP7 490 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 TDRD3Q9H7E2 651 aaKnown RBP12.79□□□□□ -0.36
CDH1-210ENST00000566612 DAGLAQ9Y4D2 1042 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 GJA3Q9Y6H8 435 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 PPP1R3GB7ZBB8 358 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 CTIFO43310 598 aaKnown RBP12.79□□□□□ -0.36
CDH1-210ENST00000566612 RNF187Q5TA31 235 aaPredicted RBP12.79□□□□□ -0.36
CDH1-210ENST00000566612 PI4KBQ9UBF8 816 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 HDAC6Q9UBN7 1215 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 GH2P01242 217 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 EHHADHQ08426 723 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 VPS72Q15906 364 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 MIGA2Q7L4E1 593 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 SLFN12Q8IYM2 578 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 TRIM9Q9C026 710 aa12.79□□□□□ -0.36
CDH1-210ENST00000566612 A0A087X0B3 334 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 BACH1O14867 736 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 MOCS3O95396 460 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 TNFAIP3P21580 790 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 CRKP46108 304 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 VWA3BQ502W6 1294 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 ST7Q9NRC1 585 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 EMILIN3Q9NT22 766 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 GSTTP1A0A1W2PQM5 241 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 SMIM23A6NLE4 172 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 STXBP3O00186 592 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 TNNC1P63316 161 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 PRKG1Q13976 671 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 U2AF1L4Q8WU68 220 aaKnown RBP12.78□□□□□ -0.36
CDH1-210ENST00000566612 ANKRD7Q92527 254 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 FAM205AQ6ZU69 1335 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 NALCNQ8IZF0 1738 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 TLDC2A0PJX2 215 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 GOLGA6BA6NDN3 693 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 ZBTB5O15062 677 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 OPA1O60313 960 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 ALAS1P13196 640 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 EEF2P13639 858 aaKnown RBP12.78□□□□□ -0.36
CDH1-210ENST00000566612 BMP6P22004 513 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 GJC1P36383 396 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 CFAP221Q4G0U5 840 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 KRT26Q7Z3Y9 468 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 TCHPQ9BT92 498 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 ANO3Q9BYT9 981 aa12.78□□□□□ -0.36
CDH1-210ENST00000566612 MTMR4Q9NYA4 1195 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms