RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 TRPC6Q9Y210 931 aa10.02□□□□□ -0.81
LSM3P5-201ENST00000566307 MYPNQ86TC9 1320 aa10.02□□□□□ -0.81
LSM3P5-201ENST00000566307 SCN4AP35499 1836 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 PARP14Q460N5 1801 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 RAD21O60216 631 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 ICAM1P05362 532 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 PTPRAP18433 802 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 ERCC5P28715 1186 aaPredicted RBP10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 CDC25BP30305 580 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 INPP5BP32019 993 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 UBA7P41226 1012 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 OAZ1P54368 228 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 DPYDQ12882 1025 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 PNOCQ13519 176 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 CALCRLQ16602 461 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 UBE2SQ16763 222 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 SH3D19Q5HYK7 790 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 C9orf131Q5VYM1 1079 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 DPY19L2Q6NUT2 758 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 CNNM4Q6P4Q7 775 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 LUZP1Q86V48 1076 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 DHX40Q8IX18 779 aaKnown RBP10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 SPICE1Q8N0Z3 855 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 ZNF280CQ8ND82 737 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 RBM46Q8TBY0 533 aaKnown RBP10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 DHX58Q96C10 678 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 FEZ1Q99689 392 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 GLIS2Q9BZE0 524 aaPredicted RBP10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 EHMT1Q9H9B1 1298 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 KCNMB3Q9NPA1 279 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 PICK1Q9NRD5 415 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 KBTBD4Q9NVX7 518 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 STK17AQ9UEE5 414 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 DDX25Q9UHL0 483 aaKnown RBP10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 PPP1R9AQ9ULJ8 1098 aa10.01□□□□□ -0.81
LSM3P5-201ENST00000566307 SPDYE3A6NKU9 549 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 USP17L15C9J2P7 530 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 USP17L13C9JLJ4 530 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 USP17L11C9JVI0 530 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 USP17L18D6R9N7 530 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 USP17L22D6RA61 530 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 USP17L17D6RBQ6 530 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 USP17L19D6RCP7 530 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 USP17L20D6RJB6 530 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 GOLGA6L19H0YKK7 550 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 GCOM1H8Y6P7 765 aaPredicted RBP10□□□□□ -0.81
LSM3P5-201ENST00000566307 ATP2A1O14983 1001 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 GRIN3BO60391 1043 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 DDNO94850 711 aaPredicted RBP10□□□□□ -0.81
LSM3P5-201ENST00000566307 TDP2O95551 362 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 TPM3P06753 285 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 POLR2MP0CAP2 368 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 HSD17B4P51659 736 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 ARHGAP4P98171 946 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 USP17L24Q0WX57 530 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 KCNB1Q14721 858 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 DPCR1Q3MIW9 517 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 NAALADL2Q58DX5 795 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 HYIQ5T013 277 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 USP17L6PQ6QN14 398 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 MCF2L2Q86YR7 1114 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 SLFN12Q8IYM2 578 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 EFCAB3Q8N7B9 438 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 MRFAP1L1Q96HT8 127 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 FAM20AQ96MK3 541 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 WRNIP1Q96S55 665 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 SLC38A10Q9HBR0 1119 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 EMILIN3Q9NT22 766 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 RMND1Q9NWS8 449 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 MAN1B1Q9UKM7 699 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 ADAMTS5Q9UNA0 930 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 ZNF536O15090 1300 aa10□□□□□ -0.81
LSM3P5-201ENST00000566307 UNCXA6NJT0 531 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 BECN2A8MW95 431 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 MAP3K13O43283 966 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 SLC37A4O43826 429 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 ADCY5O95622 1261 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 VCAM1P19320 739 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 STAT6P42226 847 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 TPM4P67936 248 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 NCAPHQ15003 741 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 RRAGBQ5VZM2 374 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 CABP7Q86V35 215 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 LDHDQ86WU2 507 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 PLA2G4DQ86XP0 818 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 PDILTQ8N807 584 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 HAS1Q92839 578 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 KIFC2Q96AC6 838 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 DCPSQ96C86 337 aaKnown RBP9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 TRIM44Q96DX7 344 aaPredicted RBP9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 CALML4Q96GE6 196 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 MMTAG2Q9BU76 263 aaKnown RBP9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 LRRC27Q9C0I9 530 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 BMP2KQ9NSY1 1161 aaPredicted RBP9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 LRWD1Q9UFC0 647 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 FRMPD4Q14CM0 1322 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 KDM3AQ9Y4C1 1321 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 RLFQ13129 1914 aa9.99□□□□□ -0.81
LSM3P5-201ENST00000566307 WDR90Q96KV7 1748 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms