RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	KLRC3	Q07444	240 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	MORC3	Q14149	939 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	CCDC144B	Q3MJ40	725 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	FAM83B	Q5T0W9	1011 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	SMARCE1	Q969G3	411 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	RPAP3	Q9H6T3	665 aa	Predicted RBP	11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	C6orf50	Q9HD87	102 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	ESYT2	A0FGR8	921 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	C19orf81	C9J6K1	198 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	E2F4	Q16254	413 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	KCTD1	Q719H9	257 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	KRT25	Q7Z3Z0	450 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	PAGE5	Q96GU1	130 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	TANGO6	Q9C0B7	1094 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	TMEM60	Q9H2L4	133 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	GPCPD1	Q9NPB8	672 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	FBXO28	Q9NVF7	368 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	RNF186	Q9NXI6	227 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	PYCARD	Q9ULZ3	195 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	AGTPBP1	Q9UPW5	1226 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	ZSWIM8	A7E2V4	1837 aa		11.48	□□□□□ -0.57
TCF4-231	ENST00000566279	hCG_1984214	I3L0E3	225 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	GNA11	P29992	359 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	MYL5	Q02045	173 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	CRHR2	Q13324	411 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	PPP4R3B	Q5MIZ7	849 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	SLFN13	Q68D06	897 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	FASTKD5	Q7L8L6	764 aa	Known RBP	11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	ZNF713	Q8N859	430 aa	Predicted RBP	11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	TRIML1	Q8N9V2	468 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	PROCA1	Q8NCQ7	364 aa	Predicted RBP	11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	RLF	Q13129	1914 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	LONP1	P36776	959 aa	Known RBP	11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	USP14	P54578	494 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	TPM4	P67936	248 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	NONO	Q15233	471 aa	Known RBP eCLIP	11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	TAF1C	Q15572	869 aa	Predicted RBP	11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	TTBK2	Q6IQ55	1244 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	PDXDC2P	Q6P474	469 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	POTEE	Q6S8J3	1075 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	KIAA1524	Q8TCG1	905 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	MKL1	Q969V6	931 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	C12orf42	Q96LP6	360 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	JMJD4	Q9H9V9	463 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	GOPC	Q9HD26	462 aa		11.47	□□□□□ -0.57
TCF4-231	ENST00000566279	COL11A1	P12107	1806 aa	Predicted RBP	11.46	□□□□□ -0.57
TCF4-231	ENST00000566279	SMC2	O95347	1197 aa		11.46	□□□□□ -0.57
TCF4-231	ENST00000566279	AFM	P43652	599 aa		11.46	□□□□□ -0.57
TCF4-231	ENST00000566279	LRMP	Q12912	555 aa		11.46	□□□□□ -0.57
TCF4-231	ENST00000566279	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.46	□□□□□ -0.57
TCF4-231	ENST00000566279	ANKRD23	Q86SG2	305 aa		11.46	□□□□□ -0.57
TCF4-231	ENST00000566279	ADGRF4	Q8IZF3	695 aa		11.46	□□□□□ -0.57
TCF4-231	ENST00000566279	IQUB	Q8NA54	791 aa		11.46	□□□□□ -0.57
TCF4-231	ENST00000566279	MLKL	Q8NB16	471 aa		11.46	□□□□□ -0.57
TCF4-231	ENST00000566279	CCDC34	Q96HJ3	373 aa		11.46	□□□□□ -0.57
TCF4-231	ENST00000566279	XPO4	Q9C0E2	1151 aa	Known RBP	11.46	□□□□□ -0.57
TCF4-231	ENST00000566279	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.46	□□□□□ -0.57
TCF4-231	ENST00000566279	SH2D4A	Q9H788	454 aa		11.46	□□□□□ -0.57
TCF4-231	ENST00000566279	SPTLC3	Q9NUV7	552 aa		11.46	□□□□□ -0.57
TCF4-231	ENST00000566279	IFNK	Q9P0W0	207 aa		11.46	□□□□□ -0.57
TCF4-231	ENST00000566279	PPP1R11	O60927	126 aa	Predicted RBP	11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	HSPA1A	P0DMV8	641 aa	Known RBP	11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	HSPA1B	P0DMV9	641 aa	Known RBP	11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	ATP1A3	P13637	1013 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	CASP1	P29466	404 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	SLC16A2	P36021	539 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	SNAP25	P60880	206 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	DPYD	Q12882	1025 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	CCDC96	Q2M329	555 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	GPATCH4	Q5T3I0	446 aa	Known RBP	11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	REXO1	Q8N1G1	1221 aa	Known RBP	11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	GMCL1P1	Q8NEA9	526 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	COA7	Q96BR5	231 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	MTMR8	Q96EF0	704 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	P2RX7	Q99572	595 aa	Known RBP	11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	PYM1	Q9BRP8	204 aa	Known RBP	11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	TMEM260	Q9NX78	707 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	WBP1L	Q9NX94	342 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	CPA4	Q9UI42	421 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	PNMA6F	A0A0J9YX94	578 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	LAD1	O00515	517 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	PRPH	P41219	470 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	SLC1A4	P43007	532 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	ADCY7	P51828	1080 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	INHBE	P58166	350 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	FANCC	Q00597	558 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	MAP2K1	Q02750	393 aa	Predicted RBP	11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	JAKMIP3	Q5VZ66	844 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	PPP1R18	Q6NYC8	613 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	DTHD1	Q6ZMT9	781 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	CATSPERG	Q6ZRH7	1159 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	NEK8	Q86SG6	692 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	CACTIN	Q8WUQ7	758 aa	Known RBP	11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	MTR	Q99707	1265 aa		11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	BIN2	Q9UBW5	565 aa	Predicted RBP	11.45	□□□□□ -0.58
TCF4-231	ENST00000566279	TMEM232	C9JQI7	657 aa		11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	WDR46	O15213	610 aa	Known RBP	11.44	□□□□□ -0.58
TCF4-231	ENST00000566279	FLOT1	O75955	427 aa		11.44	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms