RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 NID2Q14112 1375 aa15.98■□□□□ 0.15
HERPUD1-210ENST00000565966 SYNRGQ9UMZ2 1314 aa15.97■□□□□ 0.15
HERPUD1-210ENST00000565966 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.97■□□□□ 0.15
HERPUD1-210ENST00000565966 PDIA3P30101 505 aaKnown RBP15.97■□□□□ 0.15
HERPUD1-210ENST00000565966 METAP2P50579 478 aaKnown RBP eCLIP15.97■□□□□ 0.15
HERPUD1-210ENST00000565966 GJA9P57773 515 aa15.97■□□□□ 0.15
HERPUD1-210ENST00000565966 FUT2Q10981 343 aa15.97■□□□□ 0.15
HERPUD1-210ENST00000565966 ARHGEF16Q5VV41 709 aa15.97■□□□□ 0.15
HERPUD1-210ENST00000565966 NOL8Q76FK4 1167 aaKnown RBP15.97■□□□□ 0.15
HERPUD1-210ENST00000565966 KLHDC9Q8NEP7 349 aa15.97■□□□□ 0.15
HERPUD1-210ENST00000565966 UPF3AQ9H1J1 476 aaKnown RBP15.97■□□□□ 0.15
HERPUD1-210ENST00000565966 ALDH8A1Q9H2A2 487 aaPredicted RBP15.97■□□□□ 0.15
HERPUD1-210ENST00000565966 PHF24Q9UPV7 400 aa15.97■□□□□ 0.15
HERPUD1-210ENST00000565966 GNEQ9Y223 722 aaKnown RBP15.97■□□□□ 0.15
HERPUD1-210ENST00000565966 Q9Y3F1 56 aa15.97■□□□□ 0.15
HERPUD1-210ENST00000565966 CNTNAP5Q8WYK1 1306 aa15.96■□□□□ 0.15
HERPUD1-210ENST00000565966 RBM47A0AV96 593 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-210ENST00000565966 GCOM1H8Y6P7 765 aaPredicted RBP15.96■□□□□ 0.15
HERPUD1-210ENST00000565966 C6orf222P0C671 652 aaPredicted RBP15.96■□□□□ 0.15
HERPUD1-210ENST00000565966 POLR2MP0CAP2 368 aa15.96■□□□□ 0.15
HERPUD1-210ENST00000565966 SMPD1P17405 629 aa15.96■□□□□ 0.15
HERPUD1-210ENST00000565966 CST5P28325 142 aaPredicted RBP15.96■□□□□ 0.15
HERPUD1-210ENST00000565966 ADD1P35611 737 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-210ENST00000565966 PCSK9Q8NBP7 692 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-210ENST00000565966 LARP6Q9BRS8 491 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-210ENST00000565966 CCDC196A0A1B0GTZ2 297 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 hCG_1642624A0A1W2PR95 340 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 MOXD2PA6NHM9 499 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 H0YGN5 161 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 HOXA13P31271 388 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 ATN1P54259 1190 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 NKX3-2P78367 333 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 STXBP2Q15833 593 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 KCNA10Q16322 511 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 LRRC26Q2I0M4 334 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 DUSP28Q4G0W2 176 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 GNASQ5JWF2 1037 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 CCSAPQ6IQ19 270 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 SLC39A5Q6ZMH5 540 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 FERMT2Q96AC1 680 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 ZNF274Q96GC6 653 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 C22orf23Q9BZE7 217 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 WDR11Q9BZH6 1224 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 AP5M1Q9H0R1 490 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 PXMP2Q9NR77 195 aa15.95■□□□□ 0.14
HERPUD1-210ENST00000565966 MYADML2A6NDP7 307 aa15.94■□□□□ 0.14
HERPUD1-210ENST00000565966 DYNC1LI2O43237 492 aaPredicted RBP15.94■□□□□ 0.14
HERPUD1-210ENST00000565966 NR3C2P08235 984 aa15.94■□□□□ 0.14
HERPUD1-210ENST00000565966 EIF2AK2P19525 551 aaKnown RBP15.94■□□□□ 0.14
HERPUD1-210ENST00000565966 RBM25P49756 843 aaKnown RBP15.94■□□□□ 0.14
HERPUD1-210ENST00000565966 ACLYP53396 1101 aa15.94■□□□□ 0.14
HERPUD1-210ENST00000565966 AK2P54819 239 aa15.94■□□□□ 0.14
HERPUD1-210ENST00000565966 CCT2P78371 535 aaKnown RBP15.94■□□□□ 0.14
HERPUD1-210ENST00000565966 TLK2Q86UE8 772 aa15.94■□□□□ 0.14
HERPUD1-210ENST00000565966 C7orf61Q8IZ16 206 aa15.94■□□□□ 0.14
HERPUD1-210ENST00000565966 SCFD2Q8WU76 684 aa15.94■□□□□ 0.14
HERPUD1-210ENST00000565966 KIF2CQ99661 725 aa15.94■□□□□ 0.14
HERPUD1-210ENST00000565966 A0A1W2PQ45 241 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 A0A1W2PQY0 241 aa15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 NKRFO15226 690 aaKnown RBP eCLIP15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 CTAGE5O15320 804 aa15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 EIF3JO75822 258 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 ASGR1P07306 291 aa15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 NEK4P51957 841 aa15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 IRX5P78411 483 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 TTLL4Q14679 1199 aa15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 SNX17Q15036 470 aa15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 TMEM63BQ5T3F8 832 aa15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 C1orf53Q5VUE5 145 aa15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 FCHSD1Q86WN1 690 aa15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 CUL5Q93034 780 aa15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 PDCD2LQ9BRP1 358 aa15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 NCOA5Q9HCD5 579 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 V9GY48 417 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-210ENST00000565966 PIK3CDO00329 1044 aa15.92■□□□□ 0.14
HERPUD1-210ENST00000565966 ZEB2O60315 1214 aa15.92■□□□□ 0.14
HERPUD1-210ENST00000565966 RTP1P59025 263 aa15.92■□□□□ 0.14
HERPUD1-210ENST00000565966 BEX3Q00994 111 aa15.92■□□□□ 0.14
HERPUD1-210ENST00000565966 PGM5Q15124 567 aa15.92■□□□□ 0.14
HERPUD1-210ENST00000565966 ANKRD1Q15327 319 aa15.92■□□□□ 0.14
HERPUD1-210ENST00000565966 NTRK3Q16288 839 aa15.92■□□□□ 0.14
HERPUD1-210ENST00000565966 SMARCC2Q8TAQ2 1214 aa15.92■□□□□ 0.14
HERPUD1-210ENST00000565966 GLT1D1Q96MS3 346 aa15.92■□□□□ 0.14
HERPUD1-210ENST00000565966 PSTPIP2Q9H939 334 aa15.92■□□□□ 0.14
HERPUD1-210ENST00000565966 STARD7Q9NQZ5 370 aa15.92■□□□□ 0.14
HERPUD1-210ENST00000565966 TPCN1Q9ULQ1 816 aa15.92■□□□□ 0.14
HERPUD1-210ENST00000565966 MEIS2O14770 477 aa15.91■□□□□ 0.14
HERPUD1-210ENST00000565966 TXNP10599 105 aaKnown RBP15.91■□□□□ 0.14
HERPUD1-210ENST00000565966 MYCLP12524 364 aaPredicted RBP15.91■□□□□ 0.14
HERPUD1-210ENST00000565966 IFNAR1P17181 557 aa15.91■□□□□ 0.14
HERPUD1-210ENST00000565966 STK3Q13188 491 aa15.91■□□□□ 0.14
HERPUD1-210ENST00000565966 FSCN1Q16658 493 aaKnown RBP15.91■□□□□ 0.14
HERPUD1-210ENST00000565966 WWC2Q6AWC2 1192 aa15.91■□□□□ 0.14
HERPUD1-210ENST00000565966 USP17L6PQ6QN14 398 aa15.91■□□□□ 0.14
HERPUD1-210ENST00000565966 SEPT14Q6ZU15 432 aa15.91■□□□□ 0.14
HERPUD1-210ENST00000565966 HEATR3Q7Z4Q2 680 aa15.91■□□□□ 0.14
HERPUD1-210ENST00000565966 VSIG10LQ86VR7 867 aa15.91■□□□□ 0.14
HERPUD1-210ENST00000565966 GPKOWQ92917 476 aaPredicted RBP eCLIP15.91■□□□□ 0.141e-6■■■■□ 20.5
HERPUD1-210ENST00000565966 UPF2Q9HAU5 1272 aaKnown RBP15.91■□□□□ 0.14
HERPUD1-210ENST00000565966 ATP11BQ9Y2G3 1177 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms