RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 SH3BP5LQ7L8J4 393 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 SLC44A2Q8IWA5 706 aaPredicted RBP3.49□□□□□ -1.85
CHD9-216ENST00000565803 C16orf71Q8IYS4 520 aaPredicted RBP3.49□□□□□ -1.85
CHD9-216ENST00000565803 CEP57L1Q8IYX8 460 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 KCT2Q8NC54 265 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 CTNNBL1Q8WYA6 563 aaPredicted RBP3.49□□□□□ -1.85
CHD9-216ENST00000565803 WNT2BQ93097 391 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 ITFG2Q969R8 447 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 NEK1Q96PY6 1258 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 DESI2Q9BSY9 194 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 MYLK2Q9H1R3 596 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 PRKRIP1Q9H875 184 aaPredicted RBP3.49□□□□□ -1.85
CHD9-216ENST00000565803 PLAAQ9Y263 795 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 PCDHGB6Q9Y5F9 930 aa3.49□□□□□ -1.85
CHD9-216ENST00000565803 COL11A2P13942 1736 aaPredicted RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 TJP1Q07157 1748 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 FSD2A1L4K1 749 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 FAM86C2PA6NEL3 165 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 J3KRW8 73 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 TLR3O15455 904 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 XPOTO43592 962 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 FBXO24O75426 580 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 ADH1BP00325 375 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 MSL3P1P0C860 447 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 UBASH3AP57075 661 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 CCT2P78371 535 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 AP1B1Q10567 949 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 MMRN1Q13201 1228 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 HLTFQ14527 1009 aaKnown RBP eCLIP3.48□□□□□ -1.853e-7■■□□□ 11.9
CHD9-216ENST00000565803 ANKRD1Q15327 319 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 SEPT7Q16181 437 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 IQSEC1Q6DN90 963 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 NLRP14Q86W24 1093 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 BRSK2Q8IWQ3 736 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 PHTF2Q8N3S3 785 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 PHC3Q8NDX5 983 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 NUDT16Q96DE0 195 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 JAKMIP1Q96N16 626 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 SEC62Q99442 399 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 CDC6Q99741 560 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 EHMT1Q9H9B1 1298 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 NLRC4Q9NPP4 1024 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 UTP6Q9NYH9 597 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 EIF2B4Q9UI10 523 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 CDC23Q9UJX2 597 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 MAGED2Q9UNF1 606 aaPredicted RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 MUSKO15146 869 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 KPNA6O60684 536 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 GUCA1CO95843 209 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 KRT13P13646 458 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 VEGFAP15692 232 aaPredicted RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 MX2P20592 715 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 SMARCA1P28370 1054 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 POLR2BP30876 1174 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 DDIT3P35638 169 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 HADHAP40939 763 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 VEGFBP49765 207 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 PMS1P54277 932 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 TSGA10IPQ3SY00 556 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 OLFM4Q6UX06 510 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 RAB11FIP4Q86YS3 637 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 SCUBE3Q8IX30 993 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 TRMT44Q8IYL2 757 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 MYCT1Q8N699 235 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 SCG3Q8WXD2 468 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 KIF1BPQ96EK5 621 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 SEC16BQ96JE7 1060 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 MYD88Q99836 296 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 CRB3Q9BUF7 120 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 TRIM5Q9C035 493 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 FANCFQ9NPI8 374 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 MAN1C1Q9NR34 630 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 BLOC1S4Q9NUP1 217 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 TPCN1Q9ULQ1 816 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 PHTF1Q9UMS5 762 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 DOLKQ9UPQ8 538 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 HPS5Q9UPZ3 1129 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 LRCH1Q9Y2L9 728 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 AK5Q9Y6K8 562 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 LINC00854A0A1B0GVQ3 168 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 RRN3P2A6NIE6 340 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 RNF40O75150 1001 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 ZPR1O75312 459 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 CPP00450 1065 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 HNRNPCP07910 306 aaKnown RBP eCLIP3.48□□□□□ -1.85
CHD9-216ENST00000565803 TSPAN7P41732 249 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 MAPK10P53779 464 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 CACNB2Q08289 660 aaPredicted RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 SYCP1Q15431 976 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 IMMTQ16891 758 aaKnown RBP3.48□□□□□ -1.85
CHD9-216ENST00000565803 AP1ARQ63HQ0 302 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 TTLL5Q6EMB2 1281 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 CTR9Q6PD62 1173 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 STAG2Q8N3U4 1231 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 APPL2Q8NEU8 664 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 CHMP4CQ96CF2 233 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 NELL2Q99435 816 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 NUDT12Q9BQG2 462 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 CARD14Q9BXL6 1004 aa3.48□□□□□ -1.85
CHD9-216ENST00000565803 KIAA1586Q9HCI6 787 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms