RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 NCK2O43639 380 aa13.33□□□□□ -0.28
CAPN3-215ENST00000565559 EFCAB14O75071 495 aa13.33□□□□□ -0.28
CAPN3-215ENST00000565559 CDK8P49336 464 aa13.33□□□□□ -0.28
CAPN3-215ENST00000565559 DEFB103AP81534 67 aa13.33□□□□□ -0.28
CAPN3-215ENST00000565559 PURAQ00577 322 aaKnown RBP13.33□□□□□ -0.28
CAPN3-215ENST00000565559 PPP4R3BQ5MIZ7 849 aa13.33□□□□□ -0.28
CAPN3-215ENST00000565559 NFRKBQ6P4R8 1299 aa13.33□□□□□ -0.28
CAPN3-215ENST00000565559 CNKSR3Q6P9H4 555 aa13.33□□□□□ -0.28
CAPN3-215ENST00000565559 TRIM67Q6ZTA4 783 aa13.33□□□□□ -0.28
CAPN3-215ENST00000565559 EEPD1Q7L9B9 569 aa13.33□□□□□ -0.28
CAPN3-215ENST00000565559 RNF135Q8IUD6 432 aa13.33□□□□□ -0.28
CAPN3-215ENST00000565559 FBXO16Q8IX29 292 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-215ENST00000565559 FAM133AQ8N9E0 248 aa13.33□□□□□ -0.28
CAPN3-215ENST00000565559 BANK1Q8NDB2 785 aa13.33□□□□□ -0.28
CAPN3-215ENST00000565559 ARHGAP45Q92619 1136 aa13.33□□□□□ -0.28
CAPN3-215ENST00000565559 SLC38A10Q9HBR0 1119 aa13.33□□□□□ -0.28
CAPN3-215ENST00000565559 CLDND1Q9NY35 253 aa13.33□□□□□ -0.28
CAPN3-215ENST00000565559 PNMA6EA0A0J9YXQ4 647 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 ABHD14A-ACY1A0A1B0GW23 586 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 PARNO95453 639 aaKnown RBP13.32□□□□□ -0.28
CAPN3-215ENST00000565559 PTGS1P23219 599 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 PTPN11Q06124 597 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-215ENST00000565559 TTF1Q15361 905 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-215ENST00000565559 NBPF20Q3BBV1 942 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 SLC9C2Q5TAH2 1124 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 KIAA1211Q6ZU35 1233 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 FBXL6Q8N531 539 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 CAGE1Q8TC20 777 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 AFAP1L1Q8TED9 768 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 DDRGK1Q96HY6 314 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 C17orf80Q9BSJ5 609 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 ANTXR1Q9H6X2 564 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 VTA1Q9NP79 307 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 PDGFCQ9NRA1 345 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 DBNLQ9UJU6 430 aaKnown RBP13.32□□□□□ -0.28
CAPN3-215ENST00000565559 PCDHGA10Q9Y5H3 936 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 RAD50Q92878 1312 aa13.32□□□□□ -0.28
CAPN3-215ENST00000565559 SCN5AQ14524 2016 aa13.31□□□□□ -0.28
CAPN3-215ENST00000565559 SOWAHBA6NEL2 793 aa13.31□□□□□ -0.28
CAPN3-215ENST00000565559 F5H6K3 240 aa13.31□□□□□ -0.28
CAPN3-215ENST00000565559 IPO8O15397 1037 aaKnown RBP13.31□□□□□ -0.28
CAPN3-215ENST00000565559 KLRC3Q07444 240 aa13.31□□□□□ -0.28
CAPN3-215ENST00000565559 SMAD2Q15796 467 aaKnown RBP13.31□□□□□ -0.28
CAPN3-215ENST00000565559 DUSP28Q4G0W2 176 aa13.31□□□□□ -0.28
CAPN3-215ENST00000565559 TCEAL5Q5H9L2 206 aa13.31□□□□□ -0.28
CAPN3-215ENST00000565559 TAPT1Q6NXT6 567 aa13.31□□□□□ -0.28
CAPN3-215ENST00000565559 FAM117BQ6P1L5 589 aa13.31□□□□□ -0.28
CAPN3-215ENST00000565559 SAMD11Q96NU1 681 aa13.31□□□□□ -0.28
CAPN3-215ENST00000565559 NSUN3Q9H649 340 aaKnown RBP13.31□□□□□ -0.28
CAPN3-215ENST00000565559 A1CFQ9NQ94 594 aaKnown RBP13.31□□□□□ -0.28
CAPN3-215ENST00000565559 INSL6Q9Y581 213 aa13.31□□□□□ -0.28
CAPN3-215ENST00000565559 CACNA1HO95180 2353 aa13.31□□□□□ -0.28
CAPN3-215ENST00000565559 MCM3APO60318 1980 aa13.31□□□□□ -0.28
CAPN3-215ENST00000565559 MYO5AQ9Y4I1 1855 aaKnown RBP13.3□□□□□ -0.28
CAPN3-215ENST00000565559 NDUFB10O96000 172 aa13.3□□□□□ -0.28
CAPN3-215ENST00000565559 PDE6AP16499 860 aa13.3□□□□□ -0.28
CAPN3-215ENST00000565559 IKBKEQ14164 716 aa13.3□□□□□ -0.28
CAPN3-215ENST00000565559 C16orf86Q6ZW13 317 aa13.3□□□□□ -0.28
CAPN3-215ENST00000565559 LCORLQ8N3X6 602 aa13.3□□□□□ -0.28
CAPN3-215ENST00000565559 CCDC8Q9H0W5 538 aaPredicted RBP13.3□□□□□ -0.28
CAPN3-215ENST00000565559 ATP8A2Q9NTI2 1148 aa13.3□□□□□ -0.28
CAPN3-215ENST00000565559 TLR7Q9NYK1 1049 aaKnown RBP13.3□□□□□ -0.28
CAPN3-215ENST00000565559 FEM1BQ9UK73 627 aa13.3□□□□□ -0.28
CAPN3-215ENST00000565559 STXBP3O00186 592 aa13.29□□□□□ -0.28
CAPN3-215ENST00000565559 KPNA6O60684 536 aa13.29□□□□□ -0.28
CAPN3-215ENST00000565559 SURF6O75683 361 aaKnown RBP13.29□□□□□ -0.28
CAPN3-215ENST00000565559 BCAR3O75815 825 aa13.29□□□□□ -0.28
CAPN3-215ENST00000565559 FDX1P10109 184 aa13.29□□□□□ -0.28
CAPN3-215ENST00000565559 SELPP16109 830 aa13.29□□□□□ -0.28
CAPN3-215ENST00000565559 ID4P47928 161 aa13.29□□□□□ -0.28
CAPN3-215ENST00000565559 COL19A1Q14993 1142 aa13.29□□□□□ -0.28
CAPN3-215ENST00000565559 C12orf60Q5U649 245 aa13.29□□□□□ -0.28
CAPN3-215ENST00000565559 LRRC8DQ7L1W4 858 aa13.29□□□□□ -0.28
CAPN3-215ENST00000565559 OR6J1Q8NGC5 347 aa13.29□□□□□ -0.28
CAPN3-215ENST00000565559 RNF146Q9NTX7 359 aa13.29□□□□□ -0.28
CAPN3-215ENST00000565559 ZNF532Q9HCE3 1301 aa13.29□□□□□ -0.28
CAPN3-215ENST00000565559 TANC1Q9C0D5 1861 aa13.29□□□□□ -0.28
CAPN3-215ENST00000565559 TECTAO75443 2155 aa13.28□□□□□ -0.28
CAPN3-215ENST00000565559 GPM6BQ13491 265 aa13.28□□□□□ -0.28
CAPN3-215ENST00000565559 CLUL1Q15846 466 aa13.28□□□□□ -0.28
CAPN3-215ENST00000565559 PTGISQ16647 500 aa13.28□□□□□ -0.28
CAPN3-215ENST00000565559 TKFCQ3LXA3 575 aa13.28□□□□□ -0.28
CAPN3-215ENST00000565559 EPC2Q52LR7 807 aa13.28□□□□□ -0.28
CAPN3-215ENST00000565559 TMEM63BQ5T3F8 832 aa13.28□□□□□ -0.28
CAPN3-215ENST00000565559 RPAINQ86UA6 219 aa13.28□□□□□ -0.28
CAPN3-215ENST00000565559 ZDHHC16Q969W1 377 aa13.28□□□□□ -0.28
CAPN3-215ENST00000565559 YTHDC1Q96MU7 727 aaKnown RBP13.28□□□□□ -0.28
CAPN3-215ENST00000565559 KRTAP3-3Q9BYR6 98 aa13.28□□□□□ -0.28
CAPN3-215ENST00000565559 KRTAP3-2Q9BYR7 98 aa13.28□□□□□ -0.28
CAPN3-215ENST00000565559 WDR11Q9BZH6 1224 aa13.28□□□□□ -0.28
CAPN3-215ENST00000565559 ARMT1Q9H993 441 aa13.28□□□□□ -0.28
CAPN3-215ENST00000565559 NYAP2Q9P242 653 aa13.28□□□□□ -0.28
CAPN3-215ENST00000565559 CYP2D7A0A087X1C5 515 aa13.27□□□□□ -0.29
CAPN3-215ENST00000565559 PROB1E7EW31 1015 aa13.27□□□□□ -0.29
CAPN3-215ENST00000565559 H3BNC9 293 aa13.27□□□□□ -0.29
CAPN3-215ENST00000565559 MBTPS2O43462 519 aa13.27□□□□□ -0.29
CAPN3-215ENST00000565559 CXCL10P02778 98 aa13.27□□□□□ -0.29
CAPN3-215ENST00000565559 AMHP03971 560 aa13.27□□□□□ -0.29
CAPN3-215ENST00000565559 MLLT3P42568 568 aaPredicted RBP13.27□□□□□ -0.29
CAPN3-215ENST00000565559 CHMP4BP1P59074 171 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms