RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 VWCEQ96DN2 955 aa27.73■■■□□ 2.03
RAB40C-209ENST00000565511 HIPK3Q9H422 1215 aa27.73■■■□□ 2.03
RAB40C-209ENST00000565511 PPP2R5BQ15173 497 aa27.72■■■□□ 2.03
RAB40C-209ENST00000565511 TMEM199Q8N511 208 aa27.72■■■□□ 2.03
RAB40C-209ENST00000565511 ALDH8A1Q9H2A2 487 aaPredicted RBP27.72■■■□□ 2.03
RAB40C-209ENST00000565511 TRMT13Q9NUP7 481 aaKnown RBP27.72■■■□□ 2.03
RAB40C-209ENST00000565511 MAD2L2Q9UI95 211 aa27.72■■■□□ 2.03
RAB40C-209ENST00000565511 DHX16O60231 1041 aaKnown RBP27.71■■■□□ 2.03
RAB40C-209ENST00000565511 DNAJB2P25686 324 aa27.71■■■□□ 2.03
RAB40C-209ENST00000565511 CCL23P55773 120 aa27.71■■■□□ 2.03
RAB40C-209ENST00000565511 FBXO11Q86XK2 927 aa27.71■■■□□ 2.03
RAB40C-209ENST00000565511 SCFD2Q8WU76 684 aa27.71■■■□□ 2.03
RAB40C-209ENST00000565511 PBX2P40425 430 aa27.7■■■□□ 2.02
RAB40C-209ENST00000565511 CCDC62Q6P9F0 684 aa27.7■■■□□ 2.02
RAB40C-209ENST00000565511 MTMR8Q96EF0 704 aa27.7■■■□□ 2.02
RAB40C-209ENST00000565511 IL23AQ9NPF7 189 aa27.7■■■□□ 2.02
RAB40C-209ENST00000565511 POLR3EQ9NVU0 708 aa27.7■■■□□ 2.02
RAB40C-209ENST00000565511 CXXC1Q9P0U4 656 aaPredicted RBP27.7■■■□□ 2.02
RAB40C-209ENST00000565511 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.69■■■□□ 2.02
RAB40C-209ENST00000565511 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.69■■■□□ 2.02
RAB40C-209ENST00000565511 SGSM2O43147 1006 aa27.69■■■□□ 2.02
RAB40C-209ENST00000565511 TXNP10599 105 aaKnown RBP27.69■■■□□ 2.02
RAB40C-209ENST00000565511 CYP2C9P11712 490 aa27.69■■■□□ 2.02
RAB40C-209ENST00000565511 CPT1AP50416 773 aa27.69■■■□□ 2.02
RAB40C-209ENST00000565511 PALM3A6NDB9 673 aaPredicted RBP27.68■■■□□ 2.02
RAB40C-209ENST00000565511 A6NJR5 290 aa27.68■■■□□ 2.02
RAB40C-209ENST00000565511 KLRF2D3W0D1 207 aa27.68■■■□□ 2.02
RAB40C-209ENST00000565511 ANTXR2P58335 489 aa27.68■■■□□ 2.02
RAB40C-209ENST00000565511 CHST3Q7LGC8 479 aa27.68■■■□□ 2.02
RAB40C-209ENST00000565511 SCLYQ96I15 445 aa27.68■■■□□ 2.02
RAB40C-209ENST00000565511 MTG1Q9BT17 334 aaPredicted RBP27.68■■■□□ 2.02
RAB40C-209ENST00000565511 TANC1Q9C0D5 1861 aa27.68■■■□□ 2.02
RAB40C-209ENST00000565511 CHD9Q3L8U1 2897 aa27.67■■■□□ 2.02
RAB40C-209ENST00000565511 E7EWF7 191 aa27.67■■■□□ 2.02
RAB40C-209ENST00000565511 RBAK-RBAKDNI3L0D1 243 aa27.67■■■□□ 2.02
RAB40C-209ENST00000565511 DLL1O00548 723 aa27.67■■■□□ 2.02
RAB40C-209ENST00000565511 NKRFO15226 690 aaKnown RBP eCLIP27.67■■■□□ 2.02
RAB40C-209ENST00000565511 EIF2AK2P19525 551 aaKnown RBP27.67■■■□□ 2.02
RAB40C-209ENST00000565511 COL9A3Q14050 684 aaPredicted RBP27.67■■■□□ 2.02
RAB40C-209ENST00000565511 GRIN2CQ14957 1233 aa27.67■■■□□ 2.02
RAB40C-209ENST00000565511 LY6KQ17RY6 165 aa27.67■■■□□ 2.02
RAB40C-209ENST00000565511 NBPF20Q3BBV1 942 aa27.67■■■□□ 2.02
RAB40C-209ENST00000565511 PSRC1Q6PGN9 363 aaPredicted RBP27.67■■■□□ 2.02
RAB40C-209ENST00000565511 SEPT14Q6ZU15 432 aa27.67■■■□□ 2.02
RAB40C-209ENST00000565511 RMDN3Q96TC7 470 aa27.67■■■□□ 2.02
RAB40C-209ENST00000565511 MRPL11Q9Y3B7 192 aaKnown RBP27.67■■■□□ 2.02
RAB40C-209ENST00000565511 ARHGAP1Q07960 439 aa27.66■■■□□ 2.02
RAB40C-209ENST00000565511 TTLL4Q14679 1199 aa27.66■■■□□ 2.02
RAB40C-209ENST00000565511 GRM4Q14833 912 aa27.66■■■□□ 2.02
RAB40C-209ENST00000565511 RUFY2Q8WXA3 655 aa27.66■■■□□ 2.02
RAB40C-209ENST00000565511 HERVK_113Q902F9 699 aa27.66■■■□□ 2.02
RAB40C-209ENST00000565511 MPHOSPH6Q99547 160 aaKnown RBP27.66■■■□□ 2.02
RAB40C-209ENST00000565511 PBX4Q9BYU1 374 aa27.66■■■□□ 2.02
RAB40C-209ENST00000565511 U3KPZ7 1027 aaPredicted RBP27.66■■■□□ 2.02
RAB40C-209ENST00000565511 MYO9BQ13459 2157 aa27.66■■■□□ 2.02
RAB40C-209ENST00000565511 MYH7BA7E2Y1 1941 aa27.65■■■□□ 2.02
RAB40C-209ENST00000565511 PRUNE2Q8WUY3 3088 aa27.65■■■□□ 2.02
RAB40C-209ENST00000565511 TMEM265A0A087WTH1 108 aa27.65■■■□□ 2.02
RAB40C-209ENST00000565511 CFBP00751 764 aa27.65■■■□□ 2.02
RAB40C-209ENST00000565511 HSD17B4P51659 736 aa27.65■■■□□ 2.02
RAB40C-209ENST00000565511 MCF2L2Q86YR7 1114 aa27.65■■■□□ 2.02
RAB40C-209ENST00000565511 NSUN6Q8TEA1 469 aaKnown RBP27.65■■■□□ 2.02
RAB40C-209ENST00000565511 SEZ6LQ9BYH1 1024 aa27.65■■■□□ 2.02
RAB40C-209ENST00000565511 IFIT3O14879 490 aaKnown RBP27.64■■■□□ 2.02
RAB40C-209ENST00000565511 CYTH3O43739 400 aa27.64■■■□□ 2.02
RAB40C-209ENST00000565511 GHRHRQ02643 423 aa27.64■■■□□ 2.02
RAB40C-209ENST00000565511 SKAP1Q86WV1 359 aa27.64■■■□□ 2.02
RAB40C-209ENST00000565511 MAFAQ8NHW3 353 aaPredicted RBP27.64■■■□□ 2.02
RAB40C-209ENST00000565511 AFG1LQ8WV93 481 aa27.64■■■□□ 2.02
RAB40C-209ENST00000565511 TIFAQ96CG3 184 aa27.64■■■□□ 2.02
RAB40C-209ENST00000565511 AMNQ9BXJ7 453 aa27.64■■■□□ 2.02
RAB40C-209ENST00000565511 GPHNQ9NQX3 736 aaPredicted RBP27.64■■■□□ 2.02
RAB40C-209ENST00000565511 PXMP2Q9NR77 195 aa27.64■■■□□ 2.02
RAB40C-209ENST00000565511 ZBTB5O15062 677 aa27.63■■■□□ 2.01
RAB40C-209ENST00000565511 TRDNQ13061 729 aa27.63■■■□□ 2.01
RAB40C-209ENST00000565511 FAM47CQ5HY64 1035 aa27.63■■■□□ 2.01
RAB40C-209ENST00000565511 OTOP2Q7RTS6 562 aa27.63■■■□□ 2.01
RAB40C-209ENST00000565511 HOMER1Q86YM7 354 aa27.63■■■□□ 2.01
RAB40C-209ENST00000565511 MB21D2Q8IYB1 491 aaPredicted RBP27.63■■■□□ 2.01
RAB40C-209ENST00000565511 TET1Q8NFU7 2136 aa27.63■■■□□ 2.01
RAB40C-209ENST00000565511 IL31RAQ8NI17 732 aa27.63■■■□□ 2.01
RAB40C-209ENST00000565511 PIGSQ96S52 555 aa27.63■■■□□ 2.01
RAB40C-209ENST00000565511 MAF1Q9H063 256 aa27.63■■■□□ 2.01
RAB40C-209ENST00000565511 TRIP12Q14669 1992 aaPredicted RBP27.62■■■□□ 2.01
RAB40C-209ENST00000565511 MMP3P08254 477 aa27.62■■■□□ 2.01
RAB40C-209ENST00000565511 HOXA13P31271 388 aaPredicted RBP27.62■■■□□ 2.01
RAB40C-209ENST00000565511 TROAPQ12815 778 aa27.62■■■□□ 2.01
RAB40C-209ENST00000565511 ARHGEF16Q5VV41 709 aa27.62■■■□□ 2.01
RAB40C-209ENST00000565511 PHF6Q8IWS0 365 aaKnown RBP eCLIP27.62■■■□□ 2.01
RAB40C-209ENST00000565511 MAP4K1Q92918 833 aa27.62■■■□□ 2.01
RAB40C-209ENST00000565511 CTAGE1Q96RT6 745 aa27.62■■■□□ 2.01
RAB40C-209ENST00000565511 IWS1Q96ST2 819 aa27.62■■■□□ 2.01
RAB40C-209ENST00000565511 ZNF576Q9H609 170 aa27.62■■■□□ 2.01
RAB40C-209ENST00000565511 RIOX1Q9H6W3 641 aa27.62■■■□□ 2.01
RAB40C-209ENST00000565511 RBM8AQ9Y5S9 174 aaKnown RBP27.62■■■□□ 2.01
RAB40C-209ENST00000565511 B4DLN1 442 aa27.61■■■□□ 2.01
RAB40C-209ENST00000565511 RGS20O76081 388 aa27.61■■■□□ 2.01
RAB40C-209ENST00000565511 FGBP02675 491 aa27.61■■■□□ 2.01
RAB40C-209ENST00000565511 NR3C2P08235 984 aa27.61■■■□□ 2.01
RAB40C-209ENST00000565511 FOSL2P15408 326 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 306.9 ms