RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 CPT1AP50416 773 aa18.23■□□□□ 0.51
CDH3-204ENST00000565453 HSD17B4P51659 736 aa18.23■□□□□ 0.51
CDH3-204ENST00000565453 PPIGQ13427 754 aaKnown RBP eCLIP18.23■□□□□ 0.51
CDH3-204ENST00000565453 WTAPQ15007 396 aa18.23■□□□□ 0.51
CDH3-204ENST00000565453 CCDC62Q6P9F0 684 aa18.23■□□□□ 0.51
CDH3-204ENST00000565453 CHST3Q7LGC8 479 aa18.23■□□□□ 0.51
CDH3-204ENST00000565453 IGDCC4Q8TDY8 1250 aa18.23■□□□□ 0.51
CDH3-204ENST00000565453 NSUN6Q8TEA1 469 aaKnown RBP18.23■□□□□ 0.51
CDH3-204ENST00000565453 IWS1Q96ST2 819 aa18.23■□□□□ 0.51
CDH3-204ENST00000565453 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.23■□□□□ 0.51
CDH3-204ENST00000565453 PPP1R12CQ9BZL4 782 aa18.23■□□□□ 0.51
CDH3-204ENST00000565453 ERICH2A1L162 156 aa18.22■□□□□ 0.51
CDH3-204ENST00000565453 A6NJR5 290 aa18.22■□□□□ 0.51
CDH3-204ENST00000565453 CYTH3O43739 400 aa18.22■□□□□ 0.51
CDH3-204ENST00000565453 B4GALT4O60513 344 aa18.22■□□□□ 0.51
CDH3-204ENST00000565453 MYL3P08590 195 aa18.22■□□□□ 0.51
CDH3-204ENST00000565453 TXNP10599 105 aaKnown RBP18.22■□□□□ 0.51
CDH3-204ENST00000565453 CSF2RAP15509 400 aa18.22■□□□□ 0.51
CDH3-204ENST00000565453 CYP2C18P33260 490 aa18.22■□□□□ 0.51
CDH3-204ENST00000565453 TTLL4Q14679 1199 aa18.22■□□□□ 0.51
CDH3-204ENST00000565453 TMEM240Q5SV17 173 aa18.22■□□□□ 0.51
CDH3-204ENST00000565453 RASIP1Q5U651 963 aa18.22■□□□□ 0.51
CDH3-204ENST00000565453 RMDN3Q96TC7 470 aa18.22■□□□□ 0.51
CDH3-204ENST00000565453 TRPV6Q9H1D0 765 aa18.22■□□□□ 0.51
CDH3-204ENST00000565453 ALDH8A1Q9H2A2 487 aaPredicted RBP18.22■□□□□ 0.51
CDH3-204ENST00000565453 UMODL1Q5DID0 1318 aa18.22■□□□□ 0.51
CDH3-204ENST00000565453 SCN10AQ9Y5Y9 1956 aa18.21■□□□□ 0.51
CDH3-204ENST00000565453 CFBP00751 764 aa18.21■□□□□ 0.51
CDH3-204ENST00000565453 SART3Q15020 963 aaKnown RBP18.21■□□□□ 0.51
CDH3-204ENST00000565453 TMEM67Q5HYA8 995 aa18.21■□□□□ 0.51
CDH3-204ENST00000565453 ZNF697Q5TEC3 545 aa18.21■□□□□ 0.51
CDH3-204ENST00000565453 TMEM199Q8N511 208 aa18.21■□□□□ 0.51
CDH3-204ENST00000565453 PIGSQ96S52 555 aa18.21■□□□□ 0.51
CDH3-204ENST00000565453 ESYT1Q9BSJ8 1104 aa18.21■□□□□ 0.51
CDH3-204ENST00000565453 MTG1Q9BT17 334 aaPredicted RBP18.21■□□□□ 0.51
CDH3-204ENST00000565453 NOC4LQ9BVI4 516 aaKnown RBP18.21■□□□□ 0.51
CDH3-204ENST00000565453 HIPK3Q9H422 1215 aa18.21■□□□□ 0.51
CDH3-204ENST00000565453 PXMP2Q9NR77 195 aa18.21■□□□□ 0.51
CDH3-204ENST00000565453 EIF2AK2P19525 551 aaKnown RBP18.2■□□□□ 0.5
CDH3-204ENST00000565453 COL9A3Q14050 684 aaPredicted RBP18.2■□□□□ 0.5
CDH3-204ENST00000565453 STXBP2Q15833 593 aa18.2■□□□□ 0.5
CDH3-204ENST00000565453 SKAP1Q86WV1 359 aa18.2■□□□□ 0.5
CDH3-204ENST00000565453 SAMD3Q8N6K7 520 aa18.2■□□□□ 0.5
CDH3-204ENST00000565453 FAM161BQ96MY7 647 aa18.2■□□□□ 0.5
CDH3-204ENST00000565453 TTYH1Q9H313 450 aaPredicted RBP18.2■□□□□ 0.5
CDH3-204ENST00000565453 LY9Q9HBG7 655 aa18.2■□□□□ 0.5
CDH3-204ENST00000565453 MAP3K20Q9NYL2 800 aaKnown RBP18.2■□□□□ 0.5
CDH3-204ENST00000565453 PCDHA1Q9Y5I3 950 aa18.2■□□□□ 0.5
CDH3-204ENST00000565453 KIAA1217Q5T5P2 1943 aa18.19■□□□□ 0.5
CDH3-204ENST00000565453 KPNA6O60684 536 aa18.19■□□□□ 0.5
CDH3-204ENST00000565453 NR3C2P08235 984 aa18.19■□□□□ 0.5
CDH3-204ENST00000565453 ARHGAP1Q07960 439 aa18.19■□□□□ 0.5
CDH3-204ENST00000565453 LY6KQ17RY6 165 aa18.19■□□□□ 0.5
CDH3-204ENST00000565453 ARHGEF16Q5VV41 709 aa18.19■□□□□ 0.5
CDH3-204ENST00000565453 SEPT14Q6ZU15 432 aa18.19■□□□□ 0.5
CDH3-204ENST00000565453 HOMER1Q86YM7 354 aa18.19■□□□□ 0.5
CDH3-204ENST00000565453 PDCD2LQ9BRP1 358 aa18.19■□□□□ 0.5
CDH3-204ENST00000565453 MTA3Q9BTC8 594 aa18.19■□□□□ 0.5
CDH3-204ENST00000565453 WNT8AQ9H1J5 351 aa18.19■□□□□ 0.5
CDH3-204ENST00000565453 SEMA6BQ9H3T3 888 aa18.19■□□□□ 0.5
CDH3-204ENST00000565453 IL23AQ9NPF7 189 aa18.19■□□□□ 0.5
CDH3-204ENST00000565453 GPHNQ9NQX3 736 aaPredicted RBP18.19■□□□□ 0.5
CDH3-204ENST00000565453 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.18■□□□□ 0.5
CDH3-204ENST00000565453 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.18■□□□□ 0.5
CDH3-204ENST00000565453 SLC27A2O14975 620 aa18.18■□□□□ 0.5
CDH3-204ENST00000565453 EIF3JO75822 258 aaKnown RBP18.18■□□□□ 0.5
CDH3-204ENST00000565453 GH1P01241 217 aa18.18■□□□□ 0.5
CDH3-204ENST00000565453 ACRP10323 421 aa18.18■□□□□ 0.5
CDH3-204ENST00000565453 NECTIN1Q15223 517 aa18.18■□□□□ 0.5
CDH3-204ENST00000565453 NBPF20Q3BBV1 942 aa18.18■□□□□ 0.5
CDH3-204ENST00000565453 BRDTQ58F21 947 aaPredicted RBP18.18■□□□□ 0.5
CDH3-204ENST00000565453 PSRC1Q6PGN9 363 aaPredicted RBP18.18■□□□□ 0.5
CDH3-204ENST00000565453 ZNF365Q70YC5 407 aa18.18■□□□□ 0.5
CDH3-204ENST00000565453 CENPQQ7L2Z9 268 aaPredicted RBP18.18■□□□□ 0.5
CDH3-204ENST00000565453 CATIPQ7Z7H3 387 aa18.18■□□□□ 0.5
CDH3-204ENST00000565453 VWCEQ96DN2 955 aa18.18■□□□□ 0.5
CDH3-204ENST00000565453 MAP3K14Q99558 947 aa18.18■□□□□ 0.5
CDH3-204ENST00000565453 TRMT13Q9NUP7 481 aaKnown RBP18.18■□□□□ 0.5
CDH3-204ENST00000565453 DDX41Q9UJV9 622 aaKnown RBP18.18■□□□□ 0.5
CDH3-204ENST00000565453 PNMA6FA0A0J9YX94 578 aa18.17■□□□□ 0.5
CDH3-204ENST00000565453 MMP3P08254 477 aa18.17■□□□□ 0.5
CDH3-204ENST00000565453 HOXA13P31271 388 aaPredicted RBP18.17■□□□□ 0.5
CDH3-204ENST00000565453 BMP2KLQ5H9B9 411 aa18.17■□□□□ 0.5
CDH3-204ENST00000565453 NFRKBQ6P4R8 1299 aa18.17■□□□□ 0.5
CDH3-204ENST00000565453 ZNF654Q8IZM8 581 aa18.17■□□□□ 0.5
CDH3-204ENST00000565453 AFG1LQ8WV93 481 aa18.17■□□□□ 0.5
CDH3-204ENST00000565453 TMEM265A0A087WTH1 108 aa18.16■□□□□ 0.5
CDH3-204ENST00000565453 SH2B2O14492 632 aaPredicted RBP18.16■□□□□ 0.5
CDH3-204ENST00000565453 PRC1O43663 620 aa18.16■□□□□ 0.5
CDH3-204ENST00000565453 RGS20O76081 388 aa18.16■□□□□ 0.5
CDH3-204ENST00000565453 DDAH1O94760 285 aa18.16■□□□□ 0.5
CDH3-204ENST00000565453 SUPT20HL2P0C7V6 817 aa18.16■□□□□ 0.5
CDH3-204ENST00000565453 CCL23P55773 120 aa18.16■□□□□ 0.5
CDH3-204ENST00000565453 PTPN11Q06124 597 aaPredicted RBP18.16■□□□□ 0.5
CDH3-204ENST00000565453 TRAF1Q13077 416 aa18.16■□□□□ 0.5
CDH3-204ENST00000565453 CREB3L3Q68CJ9 461 aa18.16■□□□□ 0.5
CDH3-204ENST00000565453 IL31RAQ8NI17 732 aa18.16■□□□□ 0.5
CDH3-204ENST00000565453 PPP1R13LQ8WUF5 828 aa18.16■□□□□ 0.5
CDH3-204ENST00000565453 HERVK_113Q902F9 699 aa18.16■□□□□ 0.5
CDH3-204ENST00000565453 EMID1Q96A84 441 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms