RNA–Protein interactions for RNA: ENST00000565119.1

CHD9-214, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 824 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-214ENST00000565119 C11orf21Q9P2W6 132 aa7.2□□□□□ -1.26
CHD9-214ENST00000565119 SIT1Q9Y3P8 196 aa7.2□□□□□ -1.26
CHD9-214ENST00000565119 XPCQ01831 940 aaPredicted RBP7.19□□□□□ -1.26
CHD9-214ENST00000565119 AXDND1Q5T1B0 1012 aaPredicted RBP7.19□□□□□ -1.26
CHD9-214ENST00000565119 ZNF296Q8WUU4 475 aaPredicted RBP7.19□□□□□ -1.26
CHD9-214ENST00000565119 UBP1Q9NZI7 540 aa7.19□□□□□ -1.26
CHD9-214ENST00000565119 CDK11AQ9UQ88 783 aaPredicted RBP7.19□□□□□ -1.26
CHD9-214ENST00000565119 HSP90B1P14625 803 aaKnown RBP7.18□□□□□ -1.26
CHD9-214ENST00000565119 CDK11BP21127 795 aaKnown RBP7.18□□□□□ -1.26
CHD9-214ENST00000565119 PMS1P54277 932 aaKnown RBP7.18□□□□□ -1.26
CHD9-214ENST00000565119 WWC2Q6AWC2 1192 aa7.18□□□□□ -1.26
CHD9-214ENST00000565119 CIR1Q86X95 450 aaPredicted RBP7.18□□□□□ -1.26
CHD9-214ENST00000565119 TTLL6Q8N841 843 aa7.18□□□□□ -1.26
CHD9-214ENST00000565119 IGDCC4Q8TDY8 1250 aa7.18□□□□□ -1.26
CHD9-214ENST00000565119 PCDH18Q9HCL0 1135 aa7.18□□□□□ -1.26
CHD9-214ENST00000565119 IGSF3O75054 1194 aa7.17□□□□□ -1.26
CHD9-214ENST00000565119 FHL2Q14192 279 aa7.17□□□□□ -1.26
CHD9-214ENST00000565119 RCSD1Q6JBY9 416 aa7.17□□□□□ -1.26
CHD9-214ENST00000565119 ZDHHC15Q96MV8 337 aa7.17□□□□□ -1.26
CHD9-214ENST00000565119 MCMBPQ9BTE3 642 aa7.17□□□□□ -1.26
CHD9-214ENST00000565119 NOL6Q9H6R4 1146 aaKnown RBP7.17□□□□□ -1.26
CHD9-214ENST00000565119 GULP1Q9UBP9 304 aa7.17□□□□□ -1.26
CHD9-214ENST00000565119 SF3B6Q9Y3B4 125 aaKnown RBP7.17□□□□□ -1.26
CHD9-214ENST00000565119 ZNF451Q9Y4E5 1061 aa7.17□□□□□ -1.26
CHD9-214ENST00000565119 CD247P20963 164 aa7.16□□□□□ -1.26
CHD9-214ENST00000565119 MCM4P33991 863 aa7.16□□□□□ -1.26
CHD9-214ENST00000565119 SELENOPP49908 381 aa7.16□□□□□ -1.26
CHD9-214ENST00000565119 ITGA1P56199 1179 aa7.16□□□□□ -1.26
CHD9-214ENST00000565119 TGFB2P61812 414 aa7.16□□□□□ -1.26
CHD9-214ENST00000565119 POU4F1Q01851 419 aa7.16□□□□□ -1.26
CHD9-214ENST00000565119 INTS3Q68E01 1043 aaKnown RBP7.16□□□□□ -1.26
CHD9-214ENST00000565119 PLEKHH3Q7Z736 793 aa7.16□□□□□ -1.26
CHD9-214ENST00000565119 MBD6Q96DN6 1003 aa7.16□□□□□ -1.26
CHD9-214ENST00000565119 C9orf118A6NHY6 69 aa7.15□□□□□ -1.26
CHD9-214ENST00000565119 ZNF165P49910 485 aa7.15□□□□□ -1.26
CHD9-214ENST00000565119 EEF1DP3Q658K8 133 aa7.15□□□□□ -1.26
CHD9-214ENST00000565119 CD300LDQ6UXZ3 194 aa7.15□□□□□ -1.26
CHD9-214ENST00000565119 ETV3LQ6ZN32 361 aa7.15□□□□□ -1.26
CHD9-214ENST00000565119 ZNF575Q86XF7 245 aa7.15□□□□□ -1.26
CHD9-214ENST00000565119 PTPN18Q99952 460 aa7.15□□□□□ -1.26
CHD9-214ENST00000565119 PATE3B3GLJ2 98 aa7.14□□□□□ -1.27
CHD9-214ENST00000565119 MUSKO15146 869 aa7.14□□□□□ -1.27
CHD9-214ENST00000565119 SORBS3O60504 671 aa7.14□□□□□ -1.27
CHD9-214ENST00000565119 NTRK1P04629 796 aa7.14□□□□□ -1.27
CHD9-214ENST00000565119 TP53P04637 393 aaPredicted RBP7.14□□□□□ -1.27
CHD9-214ENST00000565119 EPHB4P54760 987 aa7.14□□□□□ -1.27
CHD9-214ENST00000565119 SMN1Q16637 294 aaKnown RBP7.14□□□□□ -1.27
CHD9-214ENST00000565119 SMARCC1Q92922 1105 aaPredicted RBP7.14□□□□□ -1.27
CHD9-214ENST00000565119 ZNF341Q9BYN7 854 aa7.14□□□□□ -1.27
CHD9-214ENST00000565119 ADAMTS1Q9UHI8 967 aa7.14□□□□□ -1.27
CHD9-214ENST00000565119 TCAF1Q9Y4C2 921 aa7.14□□□□□ -1.27
CHD9-214ENST00000565119 NPIPB8E9PQR5 432 aa7.13□□□□□ -1.27
CHD9-214ENST00000565119 AURKAO14965 403 aa7.13□□□□□ -1.27
CHD9-214ENST00000565119 APOBRQ0VD83 1088 aa7.13□□□□□ -1.27
CHD9-214ENST00000565119 CPNE8Q86YQ8 564 aa7.13□□□□□ -1.27
CHD9-214ENST00000565119 MIB1Q86YT6 1006 aa7.13□□□□□ -1.27
CHD9-214ENST00000565119 USP33Q8TEY7 942 aa7.13□□□□□ -1.27
CHD9-214ENST00000565119 PUS7Q96PZ0 661 aaKnown RBP7.13□□□□□ -1.27
CHD9-214ENST00000565119 FAM86C1Q9NVL1 165 aa7.13□□□□□ -1.27
CHD9-214ENST00000565119 VTI1BQ9UEU0 232 aa7.13□□□□□ -1.27
CHD9-214ENST00000565119 TESMINQ9Y4I5 508 aa7.13□□□□□ -1.27
CHD9-214ENST00000565119 ZNF28P17035 718 aa7.12□□□□□ -1.27
CHD9-214ENST00000565119 PPP2CBP62714 309 aa7.12□□□□□ -1.27
CHD9-214ENST00000565119 PPP2CAP67775 309 aa7.12□□□□□ -1.27
CHD9-214ENST00000565119 KCNA1Q09470 495 aa7.12□□□□□ -1.27
CHD9-214ENST00000565119 ZNF623O75123 536 aa7.11□□□□□ -1.27
CHD9-214ENST00000565119 ITGA4P13612 1032 aa7.11□□□□□ -1.27
CHD9-214ENST00000565119 INHBEP58166 350 aa7.11□□□□□ -1.27
CHD9-214ENST00000565119 PPP2R5DQ14738 602 aa7.11□□□□□ -1.27
CHD9-214ENST00000565119 PKN3Q6P5Z2 889 aa7.11□□□□□ -1.27
CHD9-214ENST00000565119 CHFRQ96EP1 664 aa7.11□□□□□ -1.27
CHD9-214ENST00000565119 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.11□□□□□ -1.27
CHD9-214ENST00000565119 STXBP3O00186 592 aa7.1□□□□□ -1.27
CHD9-214ENST00000565119 FUCA1P04066 466 aa7.1□□□□□ -1.27
CHD9-214ENST00000565119 CYP1A1P04798 512 aaPredicted RBP7.1□□□□□ -1.27
CHD9-214ENST00000565119 PRAMEF18Q5VWM3 479 aa7.1□□□□□ -1.27
CHD9-214ENST00000565119 IGFL4Q6B9Z1 124 aa7.1□□□□□ -1.27
CHD9-214ENST00000565119 SLITRK4Q8IW52 837 aa7.1□□□□□ -1.27
CHD9-214ENST00000565119 YTHDC1Q96MU7 727 aaKnown RBP7.1□□□□□ -1.27
CHD9-214ENST00000565119 SEMA4AQ9H3S1 761 aa7.1□□□□□ -1.27
CHD9-214ENST00000565119 JADE2Q9NQC1 790 aa7.1□□□□□ -1.27
CHD9-214ENST00000565119 DIS3Q9Y2L1 958 aaKnown RBP7.1□□□□□ -1.27
CHD9-214ENST00000565119 A0A087WZG4 1122 aa7.09□□□□□ -1.27
CHD9-214ENST00000565119 SGSM2O43147 1006 aa7.09□□□□□ -1.27
CHD9-214ENST00000565119 ADAM9Q13443 819 aa7.09□□□□□ -1.27
CHD9-214ENST00000565119 ARHGEF18Q6ZSZ5 1173 aa7.09□□□□□ -1.27
CHD9-214ENST00000565119 Q8TCH9 128 aa7.09□□□□□ -1.27
CHD9-214ENST00000565119 WDR26Q9H7D7 661 aa7.09□□□□□ -1.27
CHD9-214ENST00000565119 CBFA2T2O43439 604 aa7.08□□□□□ -1.28
CHD9-214ENST00000565119 STAT5AP42229 794 aa7.08□□□□□ -1.28
CHD9-214ENST00000565119 FOXE3Q13461 319 aa7.08□□□□□ -1.28
CHD9-214ENST00000565119 ZYXQ15942 572 aaKnown RBP7.08□□□□□ -1.28
CHD9-214ENST00000565119 ZC3H18Q86VM9 953 aaKnown RBP7.08□□□□□ -1.28
CHD9-214ENST00000565119 DCP2Q8IU60 420 aaKnown RBP7.08□□□□□ -1.28
CHD9-214ENST00000565119 KBTBD2Q8IY47 623 aa7.08□□□□□ -1.28
CHD9-214ENST00000565119 PLEKHO2Q8TD55 490 aa7.08□□□□□ -1.28
CHD9-214ENST00000565119 NKD1Q969G9 470 aa7.08□□□□□ -1.28
CHD9-214ENST00000565119 WDR33Q9C0J8 1336 aaKnown RBP7.07□□□□□ -1.28
CHD9-214ENST00000565119 C7orf72A4D263 438 aa7.07□□□□□ -1.28
CHD9-214ENST00000565119 IL13P35225 146 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms