RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 OAZ1P54368 228 aa12.67□□□□□ -0.38
SF3B3-205ENST00000564899 UBE2SQ16763 222 aa12.67□□□□□ -0.38
SF3B3-205ENST00000564899 EARS2Q5JPH6 523 aaKnown RBP12.67□□□□□ -0.38
SF3B3-205ENST00000564899 PIK3AP1Q6ZUJ8 805 aa12.67□□□□□ -0.38
SF3B3-205ENST00000564899 KRT25Q7Z3Z0 450 aa12.67□□□□□ -0.38
SF3B3-205ENST00000564899 P2RX7Q99572 595 aaKnown RBP12.67□□□□□ -0.38
SF3B3-205ENST00000564899 CRISPLD2Q9H0B8 497 aa12.67□□□□□ -0.38
SF3B3-205ENST00000564899 PNMA3Q9UL41 463 aa12.67□□□□□ -0.38
SF3B3-205ENST00000564899 NOL7Q9UMY1 257 aaKnown RBP12.67□□□□□ -0.38
SF3B3-205ENST00000564899 PCDHA6Q9UN73 950 aa12.67□□□□□ -0.38
SF3B3-205ENST00000564899 CNPY2Q9Y2B0 182 aa12.67□□□□□ -0.38
SF3B3-205ENST00000564899 PCDHA8Q9Y5H6 950 aa12.67□□□□□ -0.38
SF3B3-205ENST00000564899 FAM205CA6NFA0 338 aa12.66□□□□□ -0.38
SF3B3-205ENST00000564899 GOLGA6L22H0YM25 854 aa12.66□□□□□ -0.38
SF3B3-205ENST00000564899 FIBPO43427 364 aa12.66□□□□□ -0.38
SF3B3-205ENST00000564899 ALAS1P13196 640 aa12.66□□□□□ -0.38
SF3B3-205ENST00000564899 HERVK_113P62684 666 aa12.66□□□□□ -0.38
SF3B3-205ENST00000564899 TMEM132BQ14DG7 1078 aa12.66□□□□□ -0.38
SF3B3-205ENST00000564899 JAKMIP3Q5VZ66 844 aa12.66□□□□□ -0.38
SF3B3-205ENST00000564899 ATL3Q6DD88 541 aa12.66□□□□□ -0.38
SF3B3-205ENST00000564899 SNRNP48Q6IEG0 339 aaKnown RBP12.66□□□□□ -0.38
SF3B3-205ENST00000564899 LBX2Q6XYB7 198 aa12.66□□□□□ -0.38
SF3B3-205ENST00000564899 MB21D1Q8N884 522 aa12.66□□□□□ -0.38
SF3B3-205ENST00000564899 USP28Q96RU2 1077 aa12.66□□□□□ -0.38
SF3B3-205ENST00000564899 COL25A1Q9BXS0 654 aaPredicted RBP12.66□□□□□ -0.38
SF3B3-205ENST00000564899 TEX13BQ9BXU2 312 aa12.66□□□□□ -0.38
SF3B3-205ENST00000564899 TMEM260Q9NX78 707 aa12.66□□□□□ -0.38
SF3B3-205ENST00000564899 ZNF214Q9UL59 606 aaPredicted RBP12.66□□□□□ -0.38
SF3B3-205ENST00000564899 SLC45A1Q9Y2W3 748 aa12.66□□□□□ -0.38
SF3B3-205ENST00000564899 TNPO2O14787 897 aaKnown RBP12.65□□□□□ -0.38
SF3B3-205ENST00000564899 OPLAHO14841 1288 aa12.65□□□□□ -0.38
SF3B3-205ENST00000564899 ATP2A1O14983 1001 aa12.65□□□□□ -0.38
SF3B3-205ENST00000564899 PEX10O60683 326 aa12.65□□□□□ -0.38
SF3B3-205ENST00000564899 MCM4P33991 863 aa12.65□□□□□ -0.38
SF3B3-205ENST00000564899 MAGEA10P43363 369 aaPredicted RBP12.65□□□□□ -0.38
SF3B3-205ENST00000564899 CEBPZQ03701 1054 aaKnown RBP12.65□□□□□ -0.38
SF3B3-205ENST00000564899 PLS1Q14651 629 aa12.65□□□□□ -0.38
SF3B3-205ENST00000564899 NONOQ15233 471 aaKnown RBP eCLIP12.65□□□□□ -0.38
SF3B3-205ENST00000564899 RILPL1Q5EBL4 403 aa12.65□□□□□ -0.38
SF3B3-205ENST00000564899 USP17L6PQ6QN14 398 aa12.65□□□□□ -0.38
SF3B3-205ENST00000564899 TEX2Q8IWB9 1127 aa12.65□□□□□ -0.38
SF3B3-205ENST00000564899 FTOQ9C0B1 505 aaKnown RBP eCLIP12.65□□□□□ -0.38
SF3B3-205ENST00000564899 GDPD2Q9HCC8 539 aa12.65□□□□□ -0.38
SF3B3-205ENST00000564899 HOMER2Q9NSB8 354 aa12.65□□□□□ -0.38
SF3B3-205ENST00000564899 RNF146Q9NTX7 359 aa12.65□□□□□ -0.38
SF3B3-205ENST00000564899 MTMR10Q9NXD2 777 aa12.65□□□□□ -0.38
SF3B3-205ENST00000564899 TFIP11Q9UBB9 837 aaKnown RBP12.65□□□□□ -0.38
SF3B3-205ENST00000564899 CFAP45Q9UL16 551 aa12.65□□□□□ -0.38
SF3B3-205ENST00000564899 PLXNB2O15031 1838 aa12.65□□□□□ -0.39
SF3B3-205ENST00000564899 DDX11L8A8MPP1 907 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 GCOM1H8Y6P7 765 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-205ENST00000564899 MEIS2O14770 477 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 CFBP00751 764 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 POLR2MP0CAP2 368 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 ATP2B1P20020 1258 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 STAT3P40763 770 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 TRAPPC10P48553 1259 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 CLK2P49760 499 aaKnown RBP12.64□□□□□ -0.39
SF3B3-205ENST00000564899 AP3B2Q13367 1082 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 NFKBIBQ15653 356 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 CSPP1Q1MSJ5 1256 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 TKFCQ3LXA3 575 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 MCF2L2Q86YR7 1114 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 ANKRD13CQ8N6S4 541 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 SMCR8Q8TEV9 937 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-205ENST00000564899 GTF3C2Q8WUA4 911 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-205ENST00000564899 CLEC4DQ8WXI8 215 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 PGBD1Q96JS3 809 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 TRERF1Q96PN7 1200 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 PAGR1Q9BTK6 254 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 SCAND2PQ9GZW5 306 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-205ENST00000564899 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.64□□□□□ -0.39
SF3B3-205ENST00000564899 RTEL1Q9NZ71 1219 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 BTBD7Q9P203 1132 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 PARP14Q460N5 1801 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 RLFQ13129 1914 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 TTC28Q96AY4 2481 aa12.64□□□□□ -0.39
SF3B3-205ENST00000564899 A0A0G2JMZ2 1700 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 SPDYE3A6NKU9 549 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 PIK3CDO00329 1044 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 NFIBO00712 420 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 CNMDO75829 334 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 HOXA13P31271 388 aaPredicted RBP12.63□□□□□ -0.39
SF3B3-205ENST00000564899 BMP8BP34820 402 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 TOB1P50616 345 aaPredicted RBP12.63□□□□□ -0.39
SF3B3-205ENST00000564899 IRF5Q13568 498 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 NBR1Q14596 966 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 INF2Q27J81 1249 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 MUM1L1Q5H9M0 696 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 TTC38Q5R3I4 469 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 ANO1Q5XXA6 986 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 MCTP2Q6DN12 878 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 POTEEQ6S8J3 1075 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 PXYLP1Q8TE99 480 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 LEO1Q8WVC0 666 aaPredicted RBP12.63□□□□□ -0.39
SF3B3-205ENST00000564899 SPATA32Q96LK8 384 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 ANO3Q9BYT9 981 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 POLR3EQ9NVU0 708 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 RABGAP1Q9Y3P9 1069 aa12.63□□□□□ -0.39
SF3B3-205ENST00000564899 RIPK3Q9Y572 518 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms