RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 A6NJR5 290 aa18.65■□□□□ 0.58
CDH11-210ENST00000564770 ZBBXA8MT70 800 aa18.65■□□□□ 0.58
CDH11-210ENST00000564770 CDC37Q16543 378 aaPredicted RBP18.65■□□□□ 0.58
CDH11-210ENST00000564770 FAM47CQ5HY64 1035 aa18.65■□□□□ 0.58
CDH11-210ENST00000564770 GPATCH4Q5T3I0 446 aaKnown RBP18.65■□□□□ 0.58
CDH11-210ENST00000564770 DEFB128Q7Z7B8 93 aa18.65■□□□□ 0.58
CDH11-210ENST00000564770 PNMA1Q8ND90 353 aa18.65■□□□□ 0.58
CDH11-210ENST00000564770 DNERQ8NFT8 737 aa18.65■□□□□ 0.58
CDH11-210ENST00000564770 TBC1D5Q92609 795 aa18.65■□□□□ 0.58
CDH11-210ENST00000564770 ESR2Q92731 530 aa18.65■□□□□ 0.58
CDH11-210ENST00000564770 SYMPKQ92797 1274 aaKnown RBP18.65■□□□□ 0.58
CDH11-210ENST00000564770 RNF41Q9H4P4 317 aaPredicted RBP18.65■□□□□ 0.58
CDH11-210ENST00000564770 PNMA2Q9UL42 364 aa18.65■□□□□ 0.58
CDH11-210ENST00000564770 NKRFO15226 690 aaKnown RBP eCLIP18.64■□□□□ 0.57
CDH11-210ENST00000564770 KDM4AO75164 1064 aa18.64■□□□□ 0.57
CDH11-210ENST00000564770 TXNP10599 105 aaKnown RBP18.64■□□□□ 0.57
CDH11-210ENST00000564770 CCDC85BQ15834 202 aaPredicted RBP18.64■□□□□ 0.57
CDH11-210ENST00000564770 PPP2R2DQ66LE6 453 aa18.64■□□□□ 0.57
CDH11-210ENST00000564770 DGKHQ86XP1 1220 aa18.64■□□□□ 0.57
CDH11-210ENST00000564770 PLEKHM2Q8IWE5 1019 aa18.64■□□□□ 0.57
CDH11-210ENST00000564770 RPUSD2Q8IZ73 545 aaKnown RBP18.64■□□□□ 0.57
CDH11-210ENST00000564770 THEGQ9P2T0 379 aa18.64■□□□□ 0.57
CDH11-210ENST00000564770 RAD50Q92878 1312 aa18.64■□□□□ 0.57
CDH11-210ENST00000564770 NCOR1O75376 2440 aa18.63■□□□□ 0.57
CDH11-210ENST00000564770 TCF20Q9UGU0 1960 aaKnown RBP18.63■□□□□ 0.57
CDH11-210ENST00000564770 B4E1Z4 1266 aa18.63■□□□□ 0.57
CDH11-210ENST00000564770 RBAK-RBAKDNI3L0D1 243 aa18.63■□□□□ 0.57
CDH11-210ENST00000564770 PFKMP08237 780 aa18.63■□□□□ 0.57
CDH11-210ENST00000564770 SUPT20HL2P0C7V6 817 aa18.63■□□□□ 0.57
CDH11-210ENST00000564770 IGFBP4P22692 258 aa18.63■□□□□ 0.57
CDH11-210ENST00000564770 NFRKBQ6P4R8 1299 aa18.63■□□□□ 0.57
CDH11-210ENST00000564770 CCDC62Q6P9F0 684 aa18.63■□□□□ 0.57
CDH11-210ENST00000564770 CWC27Q6UX04 472 aaKnown RBP18.63■□□□□ 0.57
CDH11-210ENST00000564770 PCDHA11Q9Y5I1 949 aa18.63■□□□□ 0.57
CDH11-210ENST00000564770 PRRC2BQ5JSZ5 2229 aaKnown RBP18.63■□□□□ 0.57
CDH11-210ENST00000564770 ZNF213O14771 459 aa18.62■□□□□ 0.57
CDH11-210ENST00000564770 ATP2A2P16615 1042 aaKnown RBP18.62■□□□□ 0.57
CDH11-210ENST00000564770 ARHGAP1Q07960 439 aa18.62■□□□□ 0.57
CDH11-210ENST00000564770 CHD1LQ86WJ1 897 aa18.62■□□□□ 0.57
CDH11-210ENST00000564770 ENAHQ8N8S7 591 aaPredicted RBP18.62■□□□□ 0.57
CDH11-210ENST00000564770 RGS22Q8NE09 1264 aa18.62■□□□□ 0.57
CDH11-210ENST00000564770 SYTL5Q8TDW5 730 aaPredicted RBP18.62■□□□□ 0.57
CDH11-210ENST00000564770 CTAGE1Q96RT6 745 aa18.62■□□□□ 0.57
CDH11-210ENST00000564770 MPHOSPH6Q99547 160 aaKnown RBP18.62■□□□□ 0.57
CDH11-210ENST00000564770 IL25Q9H293 177 aa18.62■□□□□ 0.57
CDH11-210ENST00000564770 OSBPL3Q9H4L5 887 aa18.62■□□□□ 0.57
CDH11-210ENST00000564770 GPHNQ9NQX3 736 aaPredicted RBP18.62■□□□□ 0.57
CDH11-210ENST00000564770 ABCB11O95342 1321 aa18.61■□□□□ 0.57
CDH11-210ENST00000564770 PITPNM1O00562 1244 aa18.61■□□□□ 0.57
CDH11-210ENST00000564770 ARHGEF15O94989 841 aa18.61■□□□□ 0.57
CDH11-210ENST00000564770 IGHDP01880 384 aa18.61■□□□□ 0.57
CDH11-210ENST00000564770 CA3P07451 260 aa18.61■□□□□ 0.57
CDH11-210ENST00000564770 MMP3P08254 477 aa18.61■□□□□ 0.57
CDH11-210ENST00000564770 MFAP1P55081 439 aaKnown RBP18.61■□□□□ 0.57
CDH11-210ENST00000564770 QRICH1Q2TAL8 776 aa18.61■□□□□ 0.57
CDH11-210ENST00000564770 BRDTQ58F21 947 aaPredicted RBP18.61■□□□□ 0.57
CDH11-210ENST00000564770 ADGRF4Q8IZF3 695 aa18.61■□□□□ 0.57
CDH11-210ENST00000564770 TAAR1Q96RJ0 339 aa18.61■□□□□ 0.57
CDH11-210ENST00000564770 IQCF3P0C7M6 154 aa18.6■□□□□ 0.57
CDH11-210ENST00000564770 NUCB1Q02818 461 aa18.6■□□□□ 0.57
CDH11-210ENST00000564770 LY6KQ17RY6 165 aa18.6■□□□□ 0.57
CDH11-210ENST00000564770 ASPRV1Q53RT3 343 aa18.6■□□□□ 0.57
CDH11-210ENST00000564770 IQCA1Q86XH1 822 aa18.6■□□□□ 0.57
CDH11-210ENST00000564770 AFG1LQ8WV93 481 aa18.6■□□□□ 0.57
CDH11-210ENST00000564770 ATXN2LQ8WWM7 1075 aaKnown RBP18.6■□□□□ 0.57
CDH11-210ENST00000564770 ANKS1AQ92625 1134 aa18.6■□□□□ 0.57
CDH11-210ENST00000564770 KAT2BQ92831 832 aa18.6■□□□□ 0.57
CDH11-210ENST00000564770 ZSCAN10Q96SZ4 725 aaPredicted RBP18.6■□□□□ 0.57
CDH11-210ENST00000564770 KAT14Q9H8E8 782 aa18.6■□□□□ 0.57
CDH11-210ENST00000564770 DOCK5Q9H7D0 1870 aa18.6■□□□□ 0.57
CDH11-210ENST00000564770 EPOPA6NHQ4 379 aa18.59■□□□□ 0.57
CDH11-210ENST00000564770 TNFRSF10AO00220 468 aa18.59■□□□□ 0.57
CDH11-210ENST00000564770 OPLAHO14841 1288 aa18.59■□□□□ 0.57
CDH11-210ENST00000564770 KPNA6O60684 536 aa18.59■□□□□ 0.57
CDH11-210ENST00000564770 RFC2P35250 354 aa18.59■□□□□ 0.57
CDH11-210ENST00000564770 PTPN11Q06124 597 aaPredicted RBP18.59■□□□□ 0.57
CDH11-210ENST00000564770 SEPT14Q6ZU15 432 aa18.59■□□□□ 0.57
CDH11-210ENST00000564770 ASB2Q96Q27 587 aa18.59■□□□□ 0.57
CDH11-210ENST00000564770 JMJD4Q9H9V9 463 aa18.59■□□□□ 0.57
CDH11-210ENST00000564770 DIAPH3Q9NSV4 1193 aa18.59■□□□□ 0.57
CDH11-210ENST00000564770 RFXAPO00287 272 aa18.58■□□□□ 0.56
CDH11-210ENST00000564770 CHMP4BP1P59074 171 aa18.58■□□□□ 0.56
CDH11-210ENST00000564770 GPNMBQ14956 572 aa18.58■□□□□ 0.56
CDH11-210ENST00000564770 GDF6Q6KF10 455 aaPredicted RBP18.58■□□□□ 0.56
CDH11-210ENST00000564770 CHST3Q7LGC8 479 aa18.58■□□□□ 0.56
CDH11-210ENST00000564770 SPRED2Q7Z698 418 aa18.58■□□□□ 0.56
CDH11-210ENST00000564770 MICALL1Q8N3F8 863 aa18.58■□□□□ 0.56
CDH11-210ENST00000564770 ADAMTS19Q8TE59 1207 aa18.58■□□□□ 0.56
CDH11-210ENST00000564770 DHX38Q92620 1227 aaKnown RBP18.58■□□□□ 0.56
CDH11-210ENST00000564770 SLC9A7Q96T83 725 aa18.58■□□□□ 0.56
CDH11-210ENST00000564770 DSCC1Q9BVC3 393 aa18.58■□□□□ 0.56
CDH11-210ENST00000564770 CERS4Q9HA82 394 aa18.58■□□□□ 0.56
CDH11-210ENST00000564770 ZSWIM5Q9P217 1185 aa18.58■□□□□ 0.56
CDH11-210ENST00000564770 SIP14410 1827 aa18.58■□□□□ 0.56
CDH11-210ENST00000564770 BAZ2BQ9UIF8 2168 aaKnown RBP18.57■□□□□ 0.56
CDH11-210ENST00000564770 B4DLN1 442 aa18.57■□□□□ 0.56
CDH11-210ENST00000564770 PPP1R11O60927 126 aaPredicted RBP18.57■□□□□ 0.56
CDH11-210ENST00000564770 GH1P01241 217 aa18.57■□□□□ 0.56
CDH11-210ENST00000564770 EIF2AK2P19525 551 aaKnown RBP18.57■□□□□ 0.56
CDH11-210ENST00000564770 NT5C2P49902 561 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms